Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_D09
         (356 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97552-6|AAX55683.1|  216|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z71262-5|CAA95818.1|  606|Caenorhabditis elegans Hypothetical pr...    26   8.9  

>U97552-6|AAX55683.1|  216|Caenorhabditis elegans Hypothetical
           protein W05H7.4c protein.
          Length = 216

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 194 FIY*KMCYISTNYIHTYNTIFSYIN 120
           FI  K  +I  NY H+Y ++FS +N
Sbjct: 131 FIIKKRLWIPGNYGHSYGSLFSIVN 155


>Z71262-5|CAA95818.1|  606|Caenorhabditis elegans Hypothetical
           protein F22D6.6 protein.
          Length = 606

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 116 PMCLR*SISGLQ*QESIVR 60
           PMCLR S+ G+   ES+VR
Sbjct: 500 PMCLRLSMHGITSSESVVR 518


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,751,892
Number of Sequences: 27780
Number of extensions: 53248
Number of successful extensions: 199
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)