Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_D08
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 102 4e-22
Z68303-3|CAA92638.1| 248|Caenorhabditis elegans Hypothetical pr... 31 1.5
AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical ... 30 2.0
Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 30 2.6
AC024882-18|AAF60938.1| 392|Caenorhabditis elegans Hypothetical... 29 3.4
Z54327-8|CAA91121.2| 451|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 6.0
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 6.0
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 6.0
Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical pr... 28 7.9
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 28 7.9
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 28 7.9
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 28 7.9
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 102 bits (244), Expect = 4e-22
Identities = 76/223 (34%), Positives = 110/223 (49%), Gaps = 7/223 (3%)
Frame = +3
Query: 249 ADSSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAG------DDPPSIANSPGYSLITS 410
A++ IIVG GSAGCVLANRLTE + VL+IEAG D + + Y+L +
Sbjct: 34 AENKPTHIIVGAGSAGCVLANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSD 93
Query: 411 TLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAENGN 590
T NW Y + G + RG++ GGSS+LN+M YVRG+ DY+ W + G
Sbjct: 94 TY--NWHYHTTAQ--KNLGNRV--FYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGA 147
Query: 591 EGWDWNTVIQYFKKSERLDDNHIMSSESADLHGNKGYLGVTR-PLWKSFDEGLFDAFKEQ 767
GW++ + YFKK+E D + + GN G L V + + + KE
Sbjct: 148 SGWNYANCLPYFKKAETYSD---ATGPNDPYRGNNGPLYVKKGDAENPLHKAWLNVGKEH 204
Query: 768 GHEVLLDTNGQQQLGYSIPAYXIAGQKRQSTAYSFLXPIKIDP 896
D NG++Q G S I +R S + +++ PI+ P
Sbjct: 205 PLGWTNDMNGEKQEGISTMDMTIHNGERWSASKAYVHPIRNRP 247
>Z68303-3|CAA92638.1| 248|Caenorhabditis elegans Hypothetical
protein ZK809.2 protein.
Length = 248
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -2
Query: 511 PNILPLVCRMLLNFWP*LEKSSFTPKYPQFGSKVEVISE*PGLLAMLGGSSPASIISTDQ 332
P ILP+ C+ + WP + P YP+FG+ V V P L+ L + + ++T+Q
Sbjct: 154 PVILPVWCKEMEKVWP-----TQPPYYPKFGNTVTVHIGEPFFLSDLKKTVLSKSLTTEQ 208
Query: 331 L 329
+
Sbjct: 209 M 209
>AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical
protein Y45G12B.3 protein.
Length = 433
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 261 YDFIIVGGGSAGCVLANR-LTEVANWSVLMIE 353
YD +IVGGG GC A + L E V +IE
Sbjct: 26 YDLVIVGGGIVGCATARQLLIEKPQLKVALIE 57
>Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical
protein F08A10.1c protein.
Length = 672
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 370 GGSSPASIISTDQLATSVSLLASTQPADPPPTIMKS*LESAGT 242
G S+P SI+ +L + L+ PA P PT S + ++G+
Sbjct: 17 GSSAPKSILRAPRLTAAPKQLSFDVPASPTPTAKSSCVSTSGS 59
>Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical
protein F08A10.1b protein.
Length = 655
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 370 GGSSPASIISTDQLATSVSLLASTQPADPPPTIMKS*LESAGT 242
G S+P SI+ +L + L+ PA P PT S + ++G+
Sbjct: 17 GSSAPKSILRAPRLTAAPKQLSFDVPASPTPTAKSSCVSTSGS 59
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 261 YDFIIVGGGSAGCVLANRLTEVANWSVLMIEAG 359
+D++++GGGS G A R E SV +IE+G
Sbjct: 7 FDYLVIGGGSGGIASARRAREF-GVSVGLIESG 38
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 261 YDFIIVGGGSAGCVLANRLTEVANWSVLMIEAG 359
+D++++GGGS G A R E SV +IE+G
Sbjct: 21 FDYLVIGGGSGGIASARRAREF-GVSVGLIESG 52
>AC024882-18|AAF60938.1| 392|Caenorhabditis elegans Hypothetical
protein Y9C9A.16 protein.
Length = 392
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 198 SSFEIGEPLYPAHANVPADSSYDFIIVGGGSAGCVLANRLT-EVANWSVLMIEAGDDPPS 374
S F+ +Y +V + ++VGGG+ G +A++ T ++ + S+ +IE +D
Sbjct: 19 SHFQCKPMIYDQFNDVNRPKHFKLLVVGGGAGGLGIASKFTRKLPSGSLGIIEPLEDH-- 76
Query: 375 IANSPGYSLITSTLL 419
PG++L+ L+
Sbjct: 77 -YYQPGFTLVGGGLM 90
>Z54327-8|CAA91121.2| 451|Caenorhabditis elegans Hypothetical
protein C26D10.3 protein.
Length = 451
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +3
Query: 267 FIIVGGGSAGCVLANRLTEV---ANWSVLMIEAGDDPPSIAN 383
+IIVGGG AG A+++ ++ AN V++I A S+ N
Sbjct: 3 YIIVGGGIAGVSCASQMLQLERSANLEVIIISASSFVKSVEN 44
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +3
Query: 384 SPGYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRAD 563
S G S S + GY + S+ + SIRHT + GGS S+ RG A
Sbjct: 3056 SQGMSQSMSQHATSAGYSSSGMESSAHNSGYASIRHTGERERGGSEEEFSIGRARGMAAA 3115
Query: 564 YDNWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESADLHGNKGY 701
+ + +E V +Y SE D H + + + N Y
Sbjct: 3116 SSGYQHSSSEN---REVEEYC--SEEEDVEHSVGDKRTIVTKNHSY 3156
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +3
Query: 384 SPGYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRAD 563
S G S S + GY + S+ + SIRHT + GGS S+ RG A
Sbjct: 3640 SQGMSQSMSQHATSAGYSSSGMESSAHNSGYASIRHTGERERGGSEEEFSIGRARGMAAA 3699
Query: 564 YDNWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESADLHGNKGY 701
+ + +E V +Y SE D H + + + N Y
Sbjct: 3700 SSGYQHSSSEN---REVEEYC--SEEEDVEHSVGDKRTIVTKNHSY 3740
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +3
Query: 384 SPGYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRAD 563
S G S S + GY + S+ + SIRHT + GGS S+ RG A
Sbjct: 3056 SQGMSQSMSQHATSAGYSSSGMESSAHNSGYASIRHTGERERGGSEEEFSIGRARGMAAA 3115
Query: 564 YDNWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESADLHGNKGY 701
+ + +E V +Y SE D H + + + N Y
Sbjct: 3116 SSGYQHSSSEN---REVEEYC--SEEEDVEHSVGDKRTIVTKNHSY 3156
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +3
Query: 384 SPGYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRAD 563
S G S S + GY + S+ + SIRHT + GGS S+ RG A
Sbjct: 3640 SQGMSQSMSQHATSAGYSSSGMESSAHNSGYASIRHTGERERGGSEEEFSIGRARGMAAA 3699
Query: 564 YDNWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESADLHGNKGY 701
+ + +E V +Y SE D H + + + N Y
Sbjct: 3700 SSGYQHSSSEN---REVEEYC--SEEEDVEHSVGDKRTIVTKNHSY 3740
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +3
Query: 384 SPGYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRAD 563
S G S S + GY + S+ + SIRHT + GGS S+ RG A
Sbjct: 3640 SQGMSQSMSQHATSAGYSSSGMESSAHNSGYASIRHTGERERGGSEEEFSIGRARGMAAA 3699
Query: 564 YDNWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESADLHGNKGY 701
+ + +E V +Y SE D H + + + N Y
Sbjct: 3700 SSGYQHSSSEN---REVEEYC--SEEEDVEHSVGDKRTIVTKNHSY 3740
>Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical
protein F49C5.7 protein.
Length = 255
Score = 28.3 bits (60), Expect = 7.9
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = +1
Query: 517 RVPSTLCFTSEGTGLITTIGPKTETKAGTGIRSFSTLRKVKDSMTIIS*AVNPQTYTATK 696
+V T +T+ L TTI P T T A T + T S T +P + ++T
Sbjct: 14 KVYGTTIYTTVARRLKTTIQPSTSTTA-TSSSATETTSNTDSSSTA---TPSPSSASSTT 69
Query: 697 DTSESRDRCGSLSTKVFLTLSKNKVTKCYS 786
T++S T F+ +KC++
Sbjct: 70 PTAQSSTATSPAMTSPFIQTPVFYKSKCFT 99
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 252 DSSYDFIIVGGGSAGCVLANRLTEV 326
D +YD I++GGGS G A + +
Sbjct: 170 DHTYDLIVIGGGSGGLAAAKEASRL 194
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 252 DSSYDFIIVGGGSAGCVLANRLTEV 326
D +YD I++GGGS G A + +
Sbjct: 28 DHTYDLIVIGGGSGGLAAAKEASRL 52
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 252 DSSYDFIIVGGGSAGCVLANRLTEV 326
D +YD I++GGGS G A + +
Sbjct: 170 DHTYDLIVIGGGSGGLAAAKEASRL 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,564,388
Number of Sequences: 27780
Number of extensions: 379253
Number of successful extensions: 1155
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -