Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_D07
(813 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 48 2e-06
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 33 0.036
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 33 0.036
SPBC216.01c ||SPBC713.13c|DNA damage response protein |Schizosac... 28 1.8
SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||... 27 4.2
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 27 4.2
SPAPB8E5.05 |mfm1||M-factor precursor Mfm1|Schizosaccharomyces p... 26 5.5
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|... 26 7.3
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 26 7.3
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 9.7
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 25 9.7
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 47.6 bits (108), Expect = 2e-06
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Frame = +3
Query: 183 IHLSNNKLTTINNTVFSHCPKLMEINLAYNMLTTLDPKLFAKNNELAKLNLQGNPLKVLS 362
++L +N+L T + L +NL+YN LT + K F ++L L + GN L
Sbjct: 811 LYLVDNRLGNDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNEL---- 866
Query: 363 AEIFVHTPAMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITE--IKQNELDN 536
A + + + A + L+ +A L KN L+ +L FL++S N + +++ E +
Sbjct: 867 ANLSISSTAQVLLETLYANGNRLSSFPKNEALSK--SLRFLDISTNNLQNLAVEKAEKKS 924
Query: 537 LNKLRTLDITN 569
L KL L+ N
Sbjct: 925 LTKLPQLEYLN 935
Score = 45.6 bits (103), Expect = 8e-06
Identities = 38/132 (28%), Positives = 65/132 (49%)
Frame = +3
Query: 174 LSIIHLSNNKLTTINNTVFSHCPKLMEINLAYNMLTTLDPKLFAKNNELAKLNLQGNPLK 353
L I LS N +T I + S CPKL IN+A N+L+ + N ++ PL
Sbjct: 597 LETIDLSYNAITNIAS--LSECPKLNSINVACNLLSFYE----YSNPSATFIDFSFCPLT 650
Query: 354 VLSAEIFVHTPAMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITEIKQNELD 533
+ F ++ +++ D+SHA+L L K+ + L+N+ + V++N T I + +
Sbjct: 651 TID-PAFSYS-NLVYFDISHAKLIGL----KDSVIETLVNVETVKVNYNHFTSI-SDAIS 703
Query: 534 NLNKLRTLDITN 569
+ L+ L TN
Sbjct: 704 AMQNLKYLSCTN 715
Score = 34.3 bits (75), Expect = 0.021
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 7/168 (4%)
Frame = +3
Query: 99 NIYFFGASDCGLXXIYDNSLKTFSALSIIHLSNNKLTTINNTVFSHCPKLMEINLAYNML 278
N+ + ++C + + N L L + L N + V+ L +NL+ N+L
Sbjct: 707 NLKYLSCTNCEMSYVSPN-LGKLKHLVHLDLHANNIKIFPEEVWQ-VSSLKVVNLSSNIL 764
Query: 279 TTL------DPKLFAKNNELAKLN-LQGNPLKVLSAEIFVHTPAMIWLDMSHAELTSLWK 437
+ KL ++L + L GNP+ LS++ FV P + L + L +
Sbjct: 765 EKIKLPVATSKKLTRTISQLKIMRTLSGNPVSSLSSQEFV-MPTVEELYLVDNRLGN--- 820
Query: 438 VDKNHPLTVLINLLFLNVSHNRITEIKQNELDNLNKLRTLDITNNPLA 581
D L L LN+S+N +TEI N + L+ L ++ N LA
Sbjct: 821 -DCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELA 867
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 474 LLFLNVSHNRITEIKQNELDNLNKLRTLDITNN 572
L+ LNVSHN ++ + ++ KL+ LDI+NN
Sbjct: 431 LISLNVSHNLSLDLPLDFMERCVKLKRLDISNN 463
Score = 30.7 bits (66), Expect = 0.26
Identities = 30/135 (22%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Frame = +3
Query: 183 IHLSNNKLTTINNTVFSHCPKLMEINLAYNMLTTLDPKLFAKNNELAKLNLQGNPLKVLS 362
+++S+N + C KL ++++ N+ + + A +L LN+ N + L
Sbjct: 434 LNVSHNLSLDLPLDFMERCVKLKRLDISNNLRSPRGKPITALR-QLEVLNMSRNDIYELD 492
Query: 363 AEIF--VHTPAMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITEIKQNELDN 536
IF + ++ L++++ +L L H L+NL +L++S+N +
Sbjct: 493 PLIFSGLSRNSLKELNIANNKLFFL-----PHSTRYLVNLTYLDLSYNNFVTFPL-IITE 546
Query: 537 LNKLRTLDITNNPLA 581
L++L TL+ ++N L+
Sbjct: 547 LSQLETLNFSHNLLS 561
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 33.5 bits (73), Expect = 0.036
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +3
Query: 216 NNTVFSHCPKLMEINLAYNMLTTLDPK-LFAKNNELAKLNLQGNPLKVLSAEIFVHTPAM 392
+N V + + L+ N TLD K +F L N+Q LK + I P +
Sbjct: 837 SNFVIQPSLDIRNLYLSNNTFVTLDCKHMFLGVRYLELANVQ---LKEVPKYIATSMPNL 893
Query: 393 IWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITEIKQ--NELDNLNKLRTLDIT 566
LD+SH ++ ++ PL ++ L + NRI +++ + L NL +L LD+
Sbjct: 894 RVLDLSHNYISD---IESLKPLQMIHRLYLVG---NRIKKMRNLCDILANLKQLNVLDLR 947
Query: 567 NNPL 578
NPL
Sbjct: 948 MNPL 951
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 465 LINLLFLNVSHNRITEIKQNELDNLNKLRTLDITNNPL 578
L+NL +L++S+N++ ++ L +L LR L + +N L
Sbjct: 667 LLNLQYLDISYNQLEDL--TGLSSLIHLRELKVDSNHL 702
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 33.5 bits (73), Expect = 0.036
Identities = 26/98 (26%), Positives = 47/98 (47%)
Frame = +3
Query: 312 NELAKLNLQGNPLKVLSAEIFVHTPAMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNV 491
++L L LK + +F+ +++ LD+S ELT + + L L L LN+
Sbjct: 332 SQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEI-----PYALGELPQLCSLNL 386
Query: 492 SHNRITEIKQNELDNLNKLRTLDITNNPLACSRDFENL 605
+ N+IT + +L+ L+ L ++ N L EN+
Sbjct: 387 ASNKITGCRTFYHISLSHLQILVLSRNHLTSLSGLENV 424
>SPBC216.01c ||SPBC713.13c|DNA damage response protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 836
Score = 27.9 bits (59), Expect = 1.8
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Frame = +3
Query: 228 FSHCPKLMEINLAYNMLTTLDPKLFAKNNELAKLNLQGNPLKVLSAEIFVHTPAMIW--L 401
F C L + +N+L LD + +NN + G+ + V I H PA++W
Sbjct: 385 FQSCSALFATFVKFNLLKALDYAMSHENNSVRN---AGSDILV---SIIDHEPAIVWQKF 438
Query: 402 DMSHAELTSLWK---VDKNHPLTVLINLLFLNVSHNRITEIKQ 521
D + +S V ++ L+ LIN+L + + +I +
Sbjct: 439 DQDRKDASSSLSNAHVSQHSLLSNLINILHKESNPGVLAQISE 481
>SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 462
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 231 SHCPKLMEI--NLAYNMLTTLDPKLFAKNNELAKLNLQGNPLKVLSA 365
++CP+L+++ A DP L + +E+ + G P++V+S+
Sbjct: 193 NNCPRLVQLYEEFAERAAKLYDPLLAGRASEMMSQFMNGQPVRVVSS 239
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 4.2
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 796 PQIXSSDTA---DNGSTGWEITVVPQVLIVRKSQL*VASSSFPSLAILATLAELP 641
P I +S TA NG G EI+ VPQ I R+ V + F S + A++ LP
Sbjct: 104 PLITTSVTAVLSSNGKLGTEISEVPQPPIPRQLGE-VTTLKFASQGVRASILRLP 157
>SPAPB8E5.05 |mfm1||M-factor precursor Mfm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 42
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 147 DNSLKTFSALSIIHLSNNKLTTINNTVFSHCPKL 248
D+ + S+ S+++ N T+N TV ++ PK+
Sbjct: 2 DSMANSVSSSSVVNAGNKPAETLNKTVKNYTPKV 35
>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 712
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 570 NPLACSRDFENLMTWLNNHTVLPTGNSANVANMARDGKDDD 692
NPLA D + ++ +L+ H V TG V N ++DD
Sbjct: 332 NPLALGCDCKGVIHYLDAHFVNNTGEVETVKNAICIHEEDD 372
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 25.8 bits (54), Expect = 7.3
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 2/169 (1%)
Frame = +3
Query: 219 NTVFSHCPKLMEINLAYNMLTTLDPKLFAKNNELAKLNLQGNPLKVLSAEIFVHTPAMIW 398
N+ FS P+ E ++ N + K F ++E +P L+ T +W
Sbjct: 301 NSAFSKAPENTESSVNQNYIVGNLVKQFQAHSEYITSLDFSHPFGTLATASTDKT-VKVW 359
Query: 399 LDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITEIKQNELDN--LNKLRTLDITNN 572
DM+ K ++ + I F+ + + T ++ LDN L+K ++ + N
Sbjct: 360 -DMAGVVYLGSLKGHSDYVSCLAIQDSFI-ATGSMDTTVRLWNLDNDVLHKDNPVEESLN 417
Query: 573 PLACSRDFENLMTWLNNHTVLPTGNSANVANMARDGKDDDATYSWDFLT 719
+ +N L +HT T + + ++ G DD WD +T
Sbjct: 418 SPP-DQPVDNATNVLTSHTAPVTALALSSDDVLITGADDKTVRQWDIVT 465
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/73 (21%), Positives = 33/73 (45%)
Frame = +3
Query: 486 NVSHNRITEIKQNELDNLNKLRTLDITNNPLACSRDFENLMTWLNNHTVLPTGNSANVAN 665
N + I + Q + L + D++N L+ + +++ N + PT +++VAN
Sbjct: 667 NTRGDYIVQRTQQSANPLTNIEPQDMSN--LSTDINASDVVADSTNSILYPTSTASSVAN 724
Query: 666 MARDGKDDDATYS 704
DD T++
Sbjct: 725 TIASDVDDFGTFN 737
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 486 NVSHNRITEIKQNELDNLNKLRTLDITN---NPLACSRDFENLMTWLNNHTV 632
+VSHN + EL N N T ITN + +++ L L+NH V
Sbjct: 448 SVSHNTYRQNNLEELKNQNDYLTSQITNLEEGMVMLNKENTKLSEALSNHRV 499
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,135,830
Number of Sequences: 5004
Number of extensions: 61442
Number of successful extensions: 179
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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