Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_D07
(813 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 62 8e-12
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 25 0.63
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 22 5.9
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 22 7.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 7.8
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 61.7 bits (143), Expect = 8e-12
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Frame = +3
Query: 84 SSDQFNIYFFGASDCGLXXIYDNS-LKTFSALSIIHLSNNKLTTINNTVFSHCPKLMEIN 260
SS + +I S + + +NS L L +HL N + I + L N
Sbjct: 208 SSCRADIRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFN 267
Query: 261 LAYNMLTTLDPKLFAKNNELAKLNLQGNPLKVLSAEIFVHTPAMIWLDMSHAELTSLWKV 440
+YN L +L LFA +L +++L N L+ L IF ++ L+++ L S +V
Sbjct: 268 ASYNSLDSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRLGS-DRV 326
Query: 441 DKNHPLTVLINLLFLNVSHNRITEIKQNELDNLNKLRTLDITNNPL 578
D+ L LI L+ LN+S+N +T I +L L+ LD+ NN +
Sbjct: 327 DETTFLG-LIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSI 371
Score = 51.6 bits (118), Expect = 8e-09
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 141 IYDNSLKTFSALSIIHLSNNKLTTINNTVFSHCPKLMEINLAYNMLTTLDPKLFAKNNEL 320
I ++L + L + S N L ++ +F+ L EI+LAYN L L +F + +L
Sbjct: 252 IAGDALTGLTVLRTFNASYNSLDSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLEQL 311
Query: 321 AKLNLQGNPL--KVLSAEIFVHTPAMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVS 494
LNL GN L + F+ +I L++S+ LT + L L L++
Sbjct: 312 LVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHI----DARMFKDLFFLQILDLR 367
Query: 495 HNRITEIKQNELDNLNKLRTLDITNNPL 578
+N I I+ N L L TL++++N L
Sbjct: 368 NNSIDRIESNAFLPLYNLHTLELSDNKL 395
Score = 50.0 bits (114), Expect = 3e-08
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 2/194 (1%)
Frame = +3
Query: 18 LXIFKISNNPRLKHLPVXGFTCSSDQFNIYFFGASDCGLXXIYDNSLKTFSALSIIHLSN 197
L F S N L LP F + D I+ + GL + L +++L+
Sbjct: 263 LRTFNASYNS-LDSLPEGLFASTRDLREIHL---AYNGLRDLPKGIFTRLEQLLVLNLAG 318
Query: 198 NKLTT--INNTVFSHCPKLMEINLAYNMLTTLDPKLFAKNNELAKLNLQGNPLKVLSAEI 371
N+L + ++ T F +L+ +NL+YNMLT +D ++F L L+L+ N + + +
Sbjct: 319 NRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESNA 378
Query: 372 FVHTPAMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITEIKQNELDNLNKLR 551
F+ + L++S +L ++ N L L L +S N I I N + L+
Sbjct: 379 FLPLYNLHTLELSDNKLRTVGAQLFNG----LFVLNRLTLSGNAIASIDPLAFRNCSDLK 434
Query: 552 TLDITNNPLACSRD 593
LD++ N L D
Sbjct: 435 ELDLSGNELTSVPD 448
Score = 46.8 bits (106), Expect = 2e-07
Identities = 44/187 (23%), Positives = 80/187 (42%)
Frame = +3
Query: 12 IELXIFKISNNPRLKHLPVXGFTCSSDQFNIYFFGASDCGLXXIYDNSLKTFSALSIIHL 191
I L + +S N L H+ F D F + + + I N+ L + L
Sbjct: 335 IRLIVLNLSYN-MLTHIDARMF---KDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLEL 390
Query: 192 SNNKLTTINNTVFSHCPKLMEINLAYNMLTTLDPKLFAKNNELAKLNLQGNPLKVLSAEI 371
S+NKL T+ +F+ L + L+ N + ++DP F ++L +L+L GN L + +
Sbjct: 391 SDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSV-PDA 449
Query: 372 FVHTPAMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITEIKQNELDNLNKLR 551
+ LD+ +++ + N L L L + N I + + L +L L+
Sbjct: 450 LRDLALLKTLDLGENRISNFY----NGSFRNLDQLTGLRLIGNDIGNLSRGMLWDLPNLQ 505
Query: 552 TLDITNN 572
L++ N
Sbjct: 506 ILNLARN 512
Score = 39.5 bits (88), Expect = 4e-05
Identities = 33/143 (23%), Positives = 66/143 (46%)
Frame = +3
Query: 144 YDNSLKTFSALSIIHLSNNKLTTINNTVFSHCPKLMEINLAYNMLTTLDPKLFAKNNELA 323
Y+ S + L+ + L N + ++ + P L +NLA N + ++ F +N L
Sbjct: 470 YNGSFRNLDQLTGLRLIGNDIGNLSRGMLWDLPNLQILNLARNKVQHVERYAFERNMRLE 529
Query: 324 KLNLQGNPLKVLSAEIFVHTPAMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNR 503
+ L GN L ++ +F +++ L++S + W D + NL +L++ N
Sbjct: 530 AIRLDGNFLSDING-VFTSIASLLLLNLSENHIE--W-FDY---AFIPGNLKWLDIHGNF 582
Query: 504 ITEIKQNELDNLNKLRTLDITNN 572
I + +K++TLD ++N
Sbjct: 583 IESLGNYYKIRDSKVKTLDASHN 605
Score = 39.1 bits (87), Expect = 5e-05
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +3
Query: 315 ELAKLNLQGNPLKVLSAEIFVHTPAMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVS 494
+ ++ L GN L+ L +F+ M L ++ + + S+ +N L NL L++
Sbjct: 795 DATEVYLDGNVLRELQNHVFIGRKNMRVLYVNGSGIESI----QNRTFNGLNNLQILHLE 850
Query: 495 HNRITEIKQNELDNLNKLRTLDITNN 572
NRI E+K E + L+ LR L + NN
Sbjct: 851 DNRIRELKGFEFERLSHLRELYLQNN 876
Score = 36.3 bits (80), Expect = 3e-04
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 174 LSIIHLSNNKLTTINNTVFSHCPKLMEINLAYNMLTTLDPKLFAKNNELAKLNLQGNPLK 353
L I++L+ NK+ + F +L I L N L+ ++ +F L LNL N ++
Sbjct: 504 LQILNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDING-VFTSIASLLLLNLSENHIE 562
Query: 354 VLSAEIFVHTPAMI-WLDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITEIKQNEL 530
+ P + WLD+ + SL K V L+ SHNRITE+ + L
Sbjct: 563 WFD---YAFIPGNLKWLDIHGNFIESLGNYYKIRDSKVKT----LDASHNRITEL--SPL 613
Query: 531 DNLNKLRTLDITNN 572
+ + L I NN
Sbjct: 614 SVPDSVELLFINNN 627
Score = 23.4 bits (48), Expect = 2.5
Identities = 12/64 (18%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 171 ALSIIHLSNNKLTTINNTVFSHCPKLMEINLAYNMLTTLDPKLF-----AKNNELAKLNL 335
++ ++ ++NN + + F+ L +++ NM+ T++ A++ L + +
Sbjct: 618 SVELLFINNNYINLVRPNTFTDKVNLTRVDMYANMIETMELTSLLLTKVAEDRPLPEFYI 677
Query: 336 QGNP 347
GNP
Sbjct: 678 GGNP 681
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 25.4 bits (53), Expect = 0.63
Identities = 10/35 (28%), Positives = 24/35 (68%)
Frame = -3
Query: 622 LFSHVMRFSKSRLQANGLLVMSKVRSLFKLSNSFC 518
LFS ++ F++ A ++V++ +++L++ +SFC
Sbjct: 493 LFSDIVGFTEICSTATPMMVINMLQNLYEQFDSFC 527
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 486 NVSHNRITEIKQNELDNLNKL-RTLD 560
N ++ I ++KQ+ D +NK+ TLD
Sbjct: 165 NFKNSNIFQLKQHMRDTMNKIAETLD 190
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -1
Query: 447 FYLLSTKRLIQRDSCLAKSWPECGQKFPQK 358
F++L+T ++ L +W C + PQK
Sbjct: 9 FFVLTTMLMMAIAVELPNNWRICDRSLPQK 38
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 7.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 198 YSIDELLTEQRMFSENYRKSLLDHSQMRQR 109
Y + L + E YR+ LL+H + R R
Sbjct: 131 YPTNRSLFIREQTEEMYREMLLEHKKRRAR 160
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,147
Number of Sequences: 438
Number of extensions: 4251
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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