Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_D04
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 68 8e-12
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 64 8e-11
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 64 8e-11
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 61 1e-09
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 58 7e-09
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 42 4e-04
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 42 4e-04
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 42 6e-04
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.68
AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical ... 30 2.1
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 29 2.7
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 29 2.7
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 29 4.8
AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical... 29 4.8
AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical... 29 4.8
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 29 4.8
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 29 4.8
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 28 6.3
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 28 6.3
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 28 6.3
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical pr... 28 8.3
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 28 8.3
AF098497-2|AAC64978.1| 144|Caenorhabditis elegans Hypothetical ... 28 8.3
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 28 8.3
AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical... 28 8.3
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 67.7 bits (158), Expect = 8e-12
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 2/225 (0%)
Frame = +1
Query: 82 YQPFGQTNRFQNQYQEQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLR 261
Y P + ++ E + V +G+ E + S + + C G A + CP L
Sbjct: 155 YDPTNKKCSWKGMIDECSQV--SGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANLV 212
Query: 262 YNPNVNFDVYPCQYP-NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNG 438
+NP ++ C +P N + C E+S + PQ C GYF G R S F C NG
Sbjct: 213 FNPAIS----SCDWPKNVMDCSEKS--EKPQN---CGEVDGYFSFG--RCSSSFSACTNG 261
Query: 439 VGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSD 618
+ CPDGL F+ + C++ V +CD E+ GF S L P
Sbjct: 262 IPIVMFCPDGLMFSEKNQMCDYEWNVDECDLES-SGF-MENYKASEALTPCTNMDNGLYA 319
Query: 619 NNCQKYFL-CIDGHPRVLYCGGESAFDDLTSTCVSADEVXACPAE 750
+C L C +G + C F++ + C + C E
Sbjct: 320 LDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKCCME 364
Score = 37.1 bits (82), Expect = 0.014
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 4/136 (2%)
Frame = +1
Query: 157 CRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYP-NEVPC-LER 330
C E++ + + C NG CPDGL ++ C Y N C LE
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQM----CDYEWNVDECDLES 294
Query: 331 SS-LQPPQPTELCPHQFGYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEW 504
S ++ + +E A +C+ +C NG F CP L FN + C++
Sbjct: 295 SGFMENYKASEALTPCTNMDNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDY 354
Query: 505 PDEVADCDAEAFLGFR 552
P+ C E L R
Sbjct: 355 PETSLKCCMEDALLIR 370
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 178 YPVSGSCD-RYIECINGTAEEKLCPDGLRYNPNVNF 282
YP+ G+C+ R++ C++G A CP+ L Y+ N+ F
Sbjct: 33 YPL-GACEPRFLACVSGEARYMDCPEDLVYHKNLEF 67
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 418 FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAE 534
F CV+G CP+ L ++ C+W V +C E
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE 80
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 64.5 bits (150), Expect = 8e-11
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +1
Query: 187 SGSCD-RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTEL 363
+G C ++ C G A CP L +NP + C +P +V E + L PQPT
Sbjct: 257 NGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVA--ECAGLPTPQPT-- 308
Query: 364 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 525
C GYF G S F C NG CP GL F+ T RC++ V++C
Sbjct: 309 CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 33.5 bits (73), Expect = 0.17
Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 2/108 (1%)
Frame = +1
Query: 424 NCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYR 603
+C NG F CP L FN ++ C++P C E + E PI+ G
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKCLIEDTI--LIDETPIAAFDCSTDG-- 476
Query: 604 YYRSDNNCQ-KYFLCIDGHPRVLYCGGESA-FDDLTSTCVSADEVXAC 741
SD C Y C G C +A F + CV + + C
Sbjct: 477 -LFSDGLCSATYHQCTAGQLINFTCAASNAVFSAANTECVDSSTLLQC 523
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +1
Query: 379 GYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 528
G + LG+ F C G+ CP L +N C+W V C+
Sbjct: 30 GLYALGECE--PQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 28.3 bits (60), Expect = 6.3
Identities = 30/136 (22%), Positives = 45/136 (33%), Gaps = 3/136 (2%)
Frame = +1
Query: 127 EQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYP 306
E + V QC L+ G R + C NG + CP L +N C YP
Sbjct: 393 EGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLI----CDYP 448
Query: 307 -NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSG-FRNCVNGVGYDFVC-PDGLAF 477
+ CL ++ + T + L CS + C G +F C F
Sbjct: 449 QTSLKCLIEDTILIDE-TPIAAFDCSTDGLFSDGLCSATYHQCTAGQLINFTCAASNAVF 507
Query: 478 NSETYRCEWPDEVADC 525
++ C + C
Sbjct: 508 SAANTECVDSSTLLQC 523
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 64.5 bits (150), Expect = 8e-11
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +1
Query: 187 SGSCD-RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTEL 363
+G C ++ C G A CP L +NP + C +P +V E + L PQPT
Sbjct: 257 NGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVA--ECAGLPTPQPT-- 308
Query: 364 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 525
C GYF G S F C NG CP GL F+ T RC++ V++C
Sbjct: 309 CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 33.5 bits (73), Expect = 0.17
Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 2/108 (1%)
Frame = +1
Query: 424 NCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYR 603
+C NG F CP L FN ++ C++P C E + E PI+ G
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKCLIEDTI--LIDETPIAAFDCSTDG-- 476
Query: 604 YYRSDNNCQ-KYFLCIDGHPRVLYCGGESA-FDDLTSTCVSADEVXAC 741
SD C Y C G C +A F + CV + + C
Sbjct: 477 -LFSDGLCSATYHQCTAGQLINFTCAASNAVFSAANTECVDSSTLLQC 523
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +1
Query: 379 GYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 528
G + LG+ F C G+ CP L +N C+W V C+
Sbjct: 30 GLYALGECE--PQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 28.3 bits (60), Expect = 6.3
Identities = 30/136 (22%), Positives = 45/136 (33%), Gaps = 3/136 (2%)
Frame = +1
Query: 127 EQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYP 306
E + V QC L+ G R + C NG + CP L +N C YP
Sbjct: 393 EGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLI----CDYP 448
Query: 307 -NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSG-FRNCVNGVGYDFVC-PDGLAF 477
+ CL ++ + T + L CS + C G +F C F
Sbjct: 449 QTSLKCLIEDTILIDE-TPIAAFDCSTDGLFSDGLCSATYHQCTAGQLINFTCAASNAVF 507
Query: 478 NSETYRCEWPDEVADC 525
++ C + C
Sbjct: 508 SAANTECVDSSTLLQC 523
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Frame = +1
Query: 178 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVY-------------PCQYPNEVP 318
YP S +C ++ C++ + CP GL+Y+ ++ + P P
Sbjct: 489 YPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVTTTRAPTTTTKSAP 548
Query: 319 CLERSSLQPPQPTEL--CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETY 492
+ ++ P T C G+F G +C F CVNG+ Y+F CP+GL+F+++T
Sbjct: 549 TVTTTTRAPTTTTPAFKCTKD-GFF--GVPSDCLKFIRCVNGISYNFECPNGLSFHADTM 605
Query: 493 RCEWPD 510
C+ PD
Sbjct: 606 MCDRPD 611
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 58.0 bits (134), Expect = 7e-09
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 11/217 (5%)
Frame = +1
Query: 133 APVRPT---GQCRELNERYPVS-GSCD-RYIECINGTAEEKLCPDGLRYNPN-----VNF 282
AP +P G+C ++ S G C +Y+ C G ++ + C + ++ + V
Sbjct: 1097 APAQPKQFEGRCAHVDGEAVFSIGVCSSKYLRCSYGASKLQQCSEDRVFSNDKLECIVRE 1156
Query: 283 DVYPCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFV-C 459
V C P P +++ Q + G ++ + R+CS C G ++ C
Sbjct: 1157 SVSACTVPKN-PSIKKYYTSNDQSAFCDGKEDGLYR--NERDCSAILQCFGGELFEHPSC 1213
Query: 460 PDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQKYF 639
LAFN T +C++P +V+ C+ C E + NNC+ ++
Sbjct: 1214 QSSLAFNQLTGKCDYPQKVSGCENHGQTNGECSEHG-----------SFIADANNCEVFY 1262
Query: 640 LCIDGHPRVLYCGGESAFDDLTSTCVSADEVXACPAE 750
C+ G V+ C + F+ L S C V +C +
Sbjct: 1263 RCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQ 1299
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/115 (30%), Positives = 43/115 (37%), Gaps = 1/115 (0%)
Frame = +1
Query: 196 CDRYIECINGTA-EEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELCPH 372
C ++C G E C L +N C YP +V E Q C
Sbjct: 1196 CSAILQCFGGELFEHPSCQSSLAFNQLTG----KCDYPQKVSGCENHG----QTNGECS- 1246
Query: 373 QFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEA 537
+ G F + DA NC F CV G CP G FN C+WP V C +A
Sbjct: 1247 EHGSF-IADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQA 1300
Score = 48.4 bits (110), Expect = 6e-06
Identities = 52/182 (28%), Positives = 72/182 (39%), Gaps = 24/182 (13%)
Frame = +1
Query: 268 PNVNFDVYPCQYP-NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVG 444
PN +++ Y QY N+VP S+ P G F LG ++ + C NG
Sbjct: 665 PN-SYESYTTQYSSNDVP----STSAAPIGDRCSLDASGLFSLGCSQK---YIQCSNGAA 716
Query: 445 YDFVCPDGLAFNSETYRCEWPDEVADCDAEA-----------------FLGFRCPEVPIS 573
C + L FN T C + DEV +C ++ + G +VP +
Sbjct: 717 IVRRCGESLYFNEATQECTYRDEVPECGSQGSTSSPVITTPGQDQSSNYYGIPSDDVPST 776
Query: 574 RELGPPAGYR--YYRS---DNNC-QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVX 735
+ P G R Y S D C QKY C D V C G FD+ + +C DEV
Sbjct: 777 TQ--TPVGDRCAYVASGLFDLGCSQKYIQCSDSAASVRECEGSLYFDERSQSCRFRDEVF 834
Query: 736 AC 741
C
Sbjct: 835 KC 836
Score = 36.7 bits (81), Expect = 0.018
Identities = 34/113 (30%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Frame = +1
Query: 193 SCDR-YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQ--PPQPTEL 363
+C R Y C+NG + C D + + + P E E + P +
Sbjct: 43 ACSREYSICVNGVRQAATCSDDSVFYED---ECVPVDESPECRVDENTEEDDTPYAEFDC 99
Query: 364 CPHQFGYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRC-EWPDEV 516
Q G + +G CS F +CV G Y CPD L FN T C E DEV
Sbjct: 100 TSKQDGIYSIG----CSNQFISCVAGGAYMAKCPDSLVFNERTQDCRESCDEV 148
Score = 35.5 bits (78), Expect = 0.041
Identities = 51/222 (22%), Positives = 80/222 (36%), Gaps = 16/222 (7%)
Frame = +1
Query: 124 QEQAPVRPTGQCRELNERYPVSGSCDR-YIECINGTAEEKLCPDGLRYNPNVNFDV--YP 294
+E+ V +C + R PV G C R Y+EC + EKLC G ++ + N V
Sbjct: 1021 EEEDDVEHDQKCT-VGSRTPV-GFCVRTYLECTDAGNVEKLCRIGKLFDSHSNRCVPRIG 1078
Query: 295 C---QYPNEVPCLERSSLQPPQPTEL---CPHQFGYFKLGDARNCSGFRNCVNGVGYDFV 456
C + + + ++ P QP + C H G S + C G
Sbjct: 1079 CGKEAIRDAIKDMIATTPAPAQPKQFEGRCAHVDGEAVFSIGVCSSKYLRCSYGASKLQQ 1138
Query: 457 CPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISREL---GPPAGYRYYRSDNNC 627
C + F+++ C + V+ C + + G G YR++ +C
Sbjct: 1139 CSEDRVFSNDKLECIVRESVSACTVPKNPSIKKYYTSNDQSAFCDGKEDG--LYRNERDC 1196
Query: 628 QKYFLCIDG----HPRVLYCGGESAFDDLTSTCVSADEVXAC 741
C G HP C AF+ LT C +V C
Sbjct: 1197 SAILQCFGGELFEHPS---CQSSLAFNQLTGKCDYPQKVSGC 1235
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 628 QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVXACPAE 750
QKY C +G V CG F++ T C DEV C ++
Sbjct: 706 QKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 190 GSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP-CLERSSLQPP 348
G +YI+C NG A + C + L +N C Y +EVP C + S P
Sbjct: 703 GCSQKYIQCSNGAAIVRRCGESLYFNEATQ----ECTYRDEVPECGSQGSTSSP 752
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = +1
Query: 109 FQNQYQEQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDV 288
++ Q + P C L + G D + C N ++ CP G +N N
Sbjct: 177 YERQPSNEQPDSIDFDCNGLEDGNYADGCNDVFYSCSNNMVFQRYCPPGTVFNINQQSCD 236
Query: 289 YPC--QYPNEVPCLERSSLQPPQ 351
+ C P S++ PQ
Sbjct: 237 FQCTTDDPTTTVSYSTSTITTPQ 259
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Frame = +1
Query: 1 EYTCCADMERTFVILTCFCAFVYTQTQYQPFGQTN--RFQNQYQEQAPVRPTGQCRELNE 174
EY+ C + R TC V+ + + P ++ R +E C +
Sbjct: 47 EYSICVNGVRQAA--TCSDDSVFYEDECVPVDESPECRVDENTEEDDTPYAEFDCTSKQD 104
Query: 175 RYPVSGSCDRYIECINGTAEEKLCPDGLRYN 267
G +++I C+ G A CPD L +N
Sbjct: 105 GIYSIGCSNQFISCVAGGAYMAKCPDSLVFN 135
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 418 FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 525
++NCVNG F+C +GL F+ E RC D++A+C
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +1
Query: 178 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 318
Y + G +++ C G + CP L Y+P + C+Y VP
Sbjct: 69 YAIGGCSPQFLTCSGGISRIMDCPADLIYDPR----IVACEYSYNVP 111
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 379 GYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 525
G++ G+ CS + C NG CP LAF+ C++ V +C
Sbjct: 220 GFYSFGE---CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 418 FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 525
++NCVNG F+C +GL F+ E RC D++A+C
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +1
Query: 178 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 318
Y + G +++ C G + CP L Y+P + C+Y VP
Sbjct: 69 YAIGGCSPQFLTCSGGISRIMDCPADLIYDPR----IVACEYSYNVP 111
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 379 GYFKLGDARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 525
G++ G+ CS + C NG CP LAF+ C++ V +C
Sbjct: 220 GFYSFGE---CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 41.5 bits (93), Expect = 6e-04
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 2/123 (1%)
Frame = +1
Query: 205 YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELC-PHQFG 381
Y++C+ G + C GL YN C Y + V + + C G
Sbjct: 906 YVQCMQGRSLISSCAPGLFYNEKNGM----CAYKHTVDTCKIGKGSDIIDSNACFGKSDG 961
Query: 382 YFKLGDARNCSGFR-NCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCP 558
Y+ G CS + +C++ CP+ L F+ E+ +C +P + +C L P
Sbjct: 962 YYSAG----CSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPP 1017
Query: 559 EVP 567
VP
Sbjct: 1018 AVP 1020
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 1/124 (0%)
Frame = +1
Query: 157 CRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSS 336
C ++ Y +G Y CI+ + CP+ L+++ V+P
Sbjct: 955 CFGKSDGYYSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDR 1014
Query: 337 LQPPQPTELCPHQFGYFKLGDARNCS-GFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDE 513
P P++ C + L + CS + C NG + C L +N +T C +
Sbjct: 1015 TPPAVPSDFCTIRSN--GLHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKST 1072
Query: 514 VADC 525
DC
Sbjct: 1073 NKDC 1076
Score = 39.5 bits (88), Expect = 0.003
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 11/132 (8%)
Frame = +1
Query: 364 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEW---------PDEV 516
C ++ G F + + + F +C NGVG C D L F++ CE+ P++V
Sbjct: 353 CKNRDGIFGIKECH--ASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAICLEPRKPEDV 410
Query: 517 ADC-DAEAFLGFRCPEVPISRE-LGPPAGYRYYRSDNNCQKYFLCIDGHPRVLYCGGESA 690
+ R EV + + G P G Y + + +F C DG C G+
Sbjct: 411 PVLYNHGGAYNERPAEVKVDFDCTGKPNG--KYIKEACTKSFFTCHDGRAFANDCPGDLV 468
Query: 691 FDDLTSTCVSAD 726
F+ T TC A+
Sbjct: 469 FNKATGTCDFAE 480
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +1
Query: 328 RSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCE 501
++ L P P CP G + +G + S + CVN V Y+ CP+GL F+ RCE
Sbjct: 33 KNVLNPKGPP--CPDGDGLYAVGCS---SKYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
Score = 34.7 bits (76), Expect = 0.073
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
Frame = +1
Query: 340 QPPQPTELCPHQFGYFKLGDARNCSG-----FRNCVNGVGYDFVCPDGLAFNSETYRCEW 504
Q P T + F L D + SG F C NG CP L FN C++
Sbjct: 560 QAPVTTTIALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVGECDY 619
Query: 505 PDEVADC 525
V DC
Sbjct: 620 STNVRDC 626
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 139 VRPTGQ-CRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYN 267
+ P G C + + Y V G +Y++C+N E+ CP+GL ++
Sbjct: 36 LNPKGPPCPDGDGLYAV-GCSSKYLQCVNNVEYEQSCPEGLYFD 78
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 397 DARNCSG-FRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 525
D CS F C NG + CP+ L + + C++P+ V DC
Sbjct: 213 DNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Frame = +1
Query: 121 YQEQAPVRPT-----GQCRELNERYPVSGSCDR-YIECINGTAEEKLCPDGLRYNPNVNF 282
Y QAPV T C+ L + SG C + C NG CP L +NP V
Sbjct: 557 YTTQAPVTTTIALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVG- 615
Query: 283 DVYPCQYPNEV 315
C Y V
Sbjct: 616 ---ECDYSTNV 623
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/112 (24%), Positives = 38/112 (33%), Gaps = 1/112 (0%)
Frame = +1
Query: 409 CS-GFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELG 585
CS + C+ G C GL +N + C + V C +G + + G
Sbjct: 902 CSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCK----IGKGSDIIDSNACFG 957
Query: 586 PPAGYRYYRSDNNCQKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVXAC 741
GY S YF CID R + C F + CV + C
Sbjct: 958 KSDGYY---SAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKEC 1006
Score = 28.7 bits (61), Expect = 4.8
Identities = 28/131 (21%), Positives = 50/131 (38%), Gaps = 11/131 (8%)
Frame = +1
Query: 151 GQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPC-----QYPNEV 315
G C+ + + + ++ C NG C D L ++ V+ + + P +V
Sbjct: 351 GDCKNRDGIFGIKECHASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAICLEPRKPEDV 410
Query: 316 PCL-ERSSLQPPQPTEL-----CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAF 477
P L +P E+ C + + +A S F C +G + CP L F
Sbjct: 411 PVLYNHGGAYNERPAEVKVDFDCTGKPNGKYIKEACTKSFF-TCHDGRAFANDCPGDLVF 469
Query: 478 NSETYRCEWPD 510
N T C++ +
Sbjct: 470 NKATGTCDFAE 480
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 406 NCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 525
+C+ F +N CP GL ++ RC++ + V DC
Sbjct: 806 SCNNFETTINR------CPAGLFYSKLNNRCDYKEHVEDC 839
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.010
Identities = 33/116 (28%), Positives = 49/116 (42%)
Frame = +1
Query: 130 QAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPN 309
QAP P GQ +L+ S R ++C+ GT++ +C G +N Y C N
Sbjct: 91 QAPTCPNGQLPKLD-------SSLRPLQCLPGTSQHLIC--GANHNCFFTGLNYMCCPSN 141
Query: 310 EVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAF 477
E + S P+ T L PH AR+C G VG ++C + +F
Sbjct: 142 EPSIDNQPSCPYPKLTVLDPHGLPMKCSQIARSCPGENMHCADVGLGYICCEDPSF 197
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 31.5 bits (68), Expect = 0.68
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 451 FVCPDGLAFNSETYRCEWPDEVADC 525
F+C +GL F+ E RC D++A+C
Sbjct: 128 FICENGLFFSPEQARCAPADQIAEC 152
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +1
Query: 178 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 318
Y + G +++ C G + CP L Y+P + C+Y VP
Sbjct: 69 YAIGGCSPQFLTCSGGISRIMDCPADLIYDPR----IVACEYSYNVP 111
>AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical
protein T27C4.2 protein.
Length = 643
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +1
Query: 139 VRPTGQCRELNERYPVSGSCDR---YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPN 309
V PT + VSG+ R +++ +GT P L +N Q +
Sbjct: 183 VSPTSTVYRMETDLSVSGNAIRNEPHVKVKSGTRHSTDSPINLEKAEEIN---KTNQVTS 239
Query: 310 EVPCLERSSLQPPQPTELCPHQ 375
P +++SS +PPQPT P +
Sbjct: 240 LAPKVQKSSTEPPQPTTTVPQE 261
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +1
Query: 397 DARNCSGFRNCVNGVGYDFVCPDGLAF--NSETYRCEWP 507
D +C C G G +F+C F N T +CE P
Sbjct: 736 DVHSCPANSKCEKGAGGEFICKCDAGFQRNGRTNKCEAP 774
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +1
Query: 397 DARNCSGFRNCVNGVGYDFVCPDGLAF--NSETYRCEWP 507
D +C C G G +F+C F N T +CE P
Sbjct: 736 DVHSCPANSKCEKGAGGEFICKCDAGFQRNGRTNKCEAP 774
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +1
Query: 316 PCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNC---VNGVGY 447
PCL +L PP E CP +FG FK D R C +GV Y
Sbjct: 154 PCLYGLTL-PPH-CEFCPSRFGAFKRADIRGRWAHAICALYTHGVNY 198
>AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical
protein Y105E8A.7b protein.
Length = 840
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 622 NCQKYFLCIDGHPRVLYCGGESAF 693
+CQK + +DG PR YCG + F
Sbjct: 690 SCQKAVIRVDGGPRSEYCGTKREF 713
>AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical
protein Y105E8A.7a protein.
Length = 906
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 622 NCQKYFLCIDGHPRVLYCGGESAF 693
+CQK + +DG PR YCG + F
Sbjct: 690 SCQKAVIRVDGGPRSEYCGTKREF 713
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 154 QCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 321
QC +LN PV + I+ G +K CPDG + NP+ + + C E+ C
Sbjct: 443 QCLQLN---PVLSNKTVPIKATAGLCSDK-CPDGYQINPDDHRECRKCVGKCEIVC 494
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 154 QCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 321
QC +LN PV + I+ G +K CPDG + NP+ + + C E+ C
Sbjct: 440 QCLQLN---PVLSNKTVPIKATAGLCSDK-CPDGYQINPDDHRECRKCVGKCEIVC 491
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +1
Query: 151 GQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 330
G+C +++E CDR C+N K C Y + Y + + C +
Sbjct: 195 GECIDIDECRGYKAVCDRNAWCVNEIGSYK-CECMASYRGDGKHCTYVGLGRSSIDCKD- 252
Query: 331 SSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCV 432
S+ +C + GY GD NC+ C+
Sbjct: 253 CSMHATCMNGVCQCKEGY--EGDGFNCTDVNECL 284
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +1
Query: 151 GQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 330
G+C +++E CDR C+N K C Y + Y + + C +
Sbjct: 195 GECIDIDECRGYKAVCDRNAWCVNEIGSYK-CECMASYRGDGKHCTYVGLGRSSIDCKD- 252
Query: 331 SSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCV 432
S+ +C + GY GD NC+ C+
Sbjct: 253 CSMHATCMNGVCQCKEGY--EGDGFNCTDVNECL 284
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +1
Query: 151 GQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 330
G+C +++E CDR C+N K C Y + Y + + C +
Sbjct: 195 GECIDIDECRGYKAVCDRNAWCVNEIGSYK-CECMASYRGDGKHCTYVGLGRSSIDCKD- 252
Query: 331 SSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCV 432
S+ +C + GY GD NC+ C+
Sbjct: 253 CSMHATCMNGVCQCKEGY--EGDGFNCTDVNECL 284
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 619 NNCQKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADE 729
N+C K+ CID HP +C F C DE
Sbjct: 1865 NDCNKHAECIDIHPDSHFCSCPDGFIGDGMICDDVDE 1901
>Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical
protein T23F11.6 protein.
Length = 187
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 541 LGFRCPEVPISRELGPPAGYRYYRSDNNCQKYFLC 645
L + CP S L PP +R + N+CQ ++C
Sbjct: 22 LSYACPPSLDSLNLPPPVIHRECLTRNSCQNGYIC 56
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -3
Query: 658 DAHRCTGNTSGNCCQTCSIYIRLGDQVLYLLVLRGNGIRGKLQHRSRRLHQAIRSGRSQN 479
D +C T C TC+I + G Q++ L + +R Q S H A +S +N
Sbjct: 184 DCSQCE-ETGRKICSTCAIRLHNGHQLVEKKALTSDDVREMKQKISDASHAAFQS--LEN 240
Query: 478 *KP 470
KP
Sbjct: 241 LKP 243
>AF098497-2|AAC64978.1| 144|Caenorhabditis elegans Hypothetical
protein B0294.1 protein.
Length = 144
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 43 LTCFCAFVYTQTQYQPFGQ-TNRFQNQYQEQAPVRPTGQCRELNE 174
L+CF F Y Q FG N QNQ+++Q + G C+ + +
Sbjct: 57 LSCFAMF-YPSEQISSFGGIANIPQNQHRKQELAKADGTCQRMEK 100
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -3
Query: 658 DAHRCTGNTSGNCCQTCSIYIRLGDQVLYLLVLRGNGIRGKLQHRSRRLHQAIRSGRSQN 479
D +C T C TC+I + G Q++ L + +R Q S H A +S +N
Sbjct: 184 DCSQCE-ETGRKICSTCAIRLHNGHQLVEKKALTSDDVREMKQKISDASHAAFQS--LEN 240
Query: 478 *KP 470
KP
Sbjct: 241 LKP 243
>AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical
protein ZK973.1 protein.
Length = 745
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 493 RCEWPDEVADCDAEAFLGFRCPEVPISRELG--PPA 594
RCE DEV D E G R + I+R LG PPA
Sbjct: 108 RCEEFDEVTDISKEYSTGTRKTKANIARALGLEPPA 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,013,686
Number of Sequences: 27780
Number of extensions: 452683
Number of successful extensions: 1515
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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