Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_C24
(463 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 136 3e-31
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 107 9e-23
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 104 1e-21
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 85 9e-16
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 82 7e-15
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 81 9e-15
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 80 3e-14
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 75 8e-13
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 74 2e-12
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 60 2e-08
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 58 7e-08
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 54 2e-06
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 48 1e-04
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 47 2e-04
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 46 3e-04
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 44 0.002
UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein ORF-c4... 38 0.11
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 37 0.19
UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, wh... 35 0.99
UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.3
UniRef50_Q9I8B0 Cluster: Surfeit locus protein 6 homolog; n=5; E... 33 3.0
UniRef50_UPI0000499951 Cluster: hypothetical protein 264.t00009;... 33 4.0
UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3; ... 33 4.0
UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondria... 33 4.0
UniRef50_UPI0000498AB1 Cluster: hypothetical protein 21.t00051; ... 32 5.3
UniRef50_Q06SJ3 Cluster: Chloroplast 30S ribosomal protein S4; n... 32 7.0
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 136 bits (328), Expect = 3e-31
Identities = 71/123 (57%), Positives = 82/123 (66%)
Frame = +2
Query: 53 MGKVKCXELRTXXXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 232
M K+K +LR + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 233 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 412
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 413 VKA 421
VKA
Sbjct: 121 VKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 107 bits (258), Expect = 9e-23
Identities = 59/123 (47%), Positives = 72/123 (58%)
Frame = +2
Query: 53 MGKVKCXELRTXXXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 232
M K+KC LR LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 233 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 412
+Q K LR Y + KYKP+DLR KKTRA+R+ LT HE +++ K+ K R +A
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFA 120
Query: 413 VKA 421
VKA
Sbjct: 121 VKA 123
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 104 bits (249), Expect = 1e-21
Identities = 55/125 (44%), Positives = 71/125 (56%)
Frame = +2
Query: 44 TVKMGKVKCXELRTXXXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARV 223
T+ KVK +L + LRV K+ G +SK +I VRK+IARV
Sbjct: 61 TMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARV 120
Query: 224 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPR 403
V + + LR YKNKKY PLDLR + TRA+R+ LTKHEA +KT K+ +K+ FP R
Sbjct: 121 LTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQRKKEIHFPQR 180
Query: 404 VYAVK 418
YAVK
Sbjct: 181 KYAVK 185
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 84.6 bits (200), Expect = 9e-16
Identities = 49/121 (40%), Positives = 63/121 (52%)
Frame = +2
Query: 59 KVKCXELRTXXXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 238
K++ ELR RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 239 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 418
Q+ K R YK PL+LR K TRA RK LT + +KT KE ++ P R YA+
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALL 141
Query: 419 A 421
A
Sbjct: 142 A 142
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 81.8 bits (193), Expect = 7e-15
Identities = 49/121 (40%), Positives = 63/121 (52%)
Frame = +2
Query: 53 MGKVKCXELRTXXXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 232
M VK ELRT + LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 233 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 412
Y+QK K+ LR YKNKK+KP +LR K T+ R L+ + T ++ +K FP R Y
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYL 119
Query: 413 V 415
V
Sbjct: 120 V 120
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 81.4 bits (192), Expect = 9e-15
Identities = 43/103 (41%), Positives = 59/103 (57%)
Frame = +2
Query: 62 VKCXELRTXXXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 241
VK EL++ NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 242 KMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 370
K + NLR YK K PLDLRAKKTRA+R+ L + +++++
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKKTRAIRRKLNQQRFAMRSQR 179
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 79.8 bits (188), Expect = 3e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +2
Query: 140 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 319
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+ PLDLR K TR
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 320 AMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 421
A R+ALT +AK T K +K FP R +A+ A
Sbjct: 93 AKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 74.9 bits (176), Expect = 8e-13
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Frame = +2
Query: 137 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK---PLDLRA 307
+ LRV + TGG ++L +IR +RK+IAR+ V +Q + NL+ Y ++K + P LR
Sbjct: 30 SQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQNERSNLKMFYADRKLRCKTPKVLRT 89
Query: 308 KKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 418
K T R AL ++E KT +++R+ FP RVYAVK
Sbjct: 90 KLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYAVK 126
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 73.7 bits (173), Expect = 2e-12
Identities = 37/92 (40%), Positives = 61/92 (66%)
Frame = +2
Query: 143 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRA 322
LR KV+ G A KL +I +VRK IA+ V +++ + +++N K+ P+DLR KKTRA
Sbjct: 33 LRTVKVSAGNAQKLGRIGLVRKRIAKFLTVINEQRRNSVKNAAKSSTKLPVDLRGKKTRA 92
Query: 323 MRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 418
+R+ LT+ E KT+++ ++ + FP R +A+K
Sbjct: 93 IRQRLTRSERAQKTQRQWKRLNNFPLRKFALK 124
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 60.1 bits (139), Expect = 2e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +2
Query: 248 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 421
K NL YK KKYK L LR KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 58.4 bits (135), Expect = 7e-08
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +2
Query: 140 NLRVAKVTGG-VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 316
+LR K T G V ++++ RV +K +ARV V +QK + R ++ ++ P R + T
Sbjct: 58 SLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLT 117
Query: 317 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 418
AMR LT+ + ++ K +++K FP YAVK
Sbjct: 118 HAMRCQLTEKQKRLLPSKLMKRKLQFPKLKYAVK 151
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 54.0 bits (124), Expect = 2e-06
Identities = 39/106 (36%), Positives = 50/106 (47%)
Frame = +2
Query: 41 VTVKMGKVKCXELRTXXXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIAR 220
VTV M ++K LR + LRVA+VTGG +KLS I+ VR A+
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALRE 162
Query: 221 VYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKI 358
Y K K PLDLR KKT A+R+ LTKH+ +
Sbjct: 163 AY-------------KKKKKSLLPLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 48.0 bits (109), Expect = 1e-04
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +2
Query: 143 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRA 322
L+ K A+KL++I+ R+ +ARV + + L+ Y K P+DLR + ++
Sbjct: 31 LKGQKAASAAATKLTEIKNTRRDVARVKSILMVSQRKALQEKYAKAKLVPIDLRKHQEKS 90
Query: 323 MRKALT-KHEAKIKTRKEIRKKSLFPPRVYAVKA 421
+R L K+ K+ ++ R K LF R +A+KA
Sbjct: 91 LRNKLAPKYANKLTAQESRRHKCLF-ERKFALKA 123
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 46.8 bits (106), Expect = 2e-04
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +2
Query: 143 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK--PLDLRAKKT 316
LR K +G V + + I+ +K +AR V +K+ L Y+ P +LR K
Sbjct: 30 LRQKKNSGDVGA--NDIKTAKKNLARALTVRREKILEELVEAYRGTPVSKLPKELRPKLN 87
Query: 317 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 412
R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 88 RSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 46.4 bits (105), Expect = 3e-04
Identities = 37/92 (40%), Positives = 41/92 (44%)
Frame = -2
Query: 420 ALTA*TLGGKRDFFLISFLVLIFASCLVRALRIARVFLALKSKGXXXXXXXXXXXXXXXF 241
AL+A GK F V S LV+A R+ARVF KS G
Sbjct: 394 ALSAYLRCGKAASFFAWRAVFAPFSDLVKARRMARVFFLRKSSGWYFAPSYADRKDANCL 453
Query: 240 W*YTM*TRAIAFLTTRILDSLEATPPVTLATR 145
W T+ AIA T IL SL PPVTLATR
Sbjct: 454 WRITVRVCAIANRTCLILLSLPGAPPVTLATR 485
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +2
Query: 287 KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 406
KPLDLR KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 1 KPLDLRPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein
ORF-c40_015; n=1; Sulfolobus solfataricus|Rep: Putative
uncharacterized protein ORF-c40_015 - Sulfolobus
solfataricus
Length = 360
Score = 37.9 bits (84), Expect = 0.11
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 161 TGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKA-- 334
T G+ S L K ++ IV+ QK+K +L +Y+NK + K+R+ RKA
Sbjct: 183 TVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKANR 242
Query: 335 LTKHEAKIKTRKEIRKKS 388
+ K+E K K I+ S
Sbjct: 243 IAKYERYFKEAKNIKTLS 260
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 37.1 bits (82), Expect = 0.19
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +2
Query: 143 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 316
L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL + T
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQSKKAHT 68
>UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 485
Score = 34.7 bits (76), Expect = 0.99
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 218 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKE 373
R Y++ +Q + + L N YKN+K +R+ K +K K KIK RK+
Sbjct: 280 RNYLIQNQIIILQLSNSYKNRKLSKKKIRSLKKSKKKKFKLKSILKIKKRKK 331
>UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 33.5 bits (73), Expect = 2.3
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 179 KLSKIRVVRKAIARVYIVYHQKMKVNLRNHYK-NKKYKPLDLRAKKTRAMRKALTKHEAK 355
+L K + +K + Y+ QK ++ R K NK+ K L + +K + K K + +
Sbjct: 110 QLKKKKKKKKKQKKQYLEKKQKKQLKKRKKKKKNKQNKQLTKKLRKQKMKNKKXKKQKKQ 169
Query: 356 IKTRKEIRKK 385
K RK+++KK
Sbjct: 170 RKQRKQLKKK 179
>UniRef50_Q9I8B0 Cluster: Surfeit locus protein 6 homolog; n=5;
Euteleostomi|Rep: Surfeit locus protein 6 homolog -
Xenopus laevis (African clawed frog)
Length = 341
Score = 33.1 bits (72), Expect = 3.0
Identities = 28/86 (32%), Positives = 43/86 (50%)
Frame = +2
Query: 161 TGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALT 340
TG AS S + ++RK + +K++ + R+ NK P D A+K R RK
Sbjct: 89 TGTAASSFSTVDILRKRL-------QEKIQES-RSQLSNKSLTPED--AEKRRQRRKQ-- 136
Query: 341 KHEAKIKTRKEIRKKSLFPPRVYAVK 418
+ E K + RKE++KK+ P VK
Sbjct: 137 ERERKKRKRKELKKKAAQEPEGNEVK 162
>UniRef50_UPI0000499951 Cluster: hypothetical protein 264.t00009;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 264.t00009 - Entamoeba histolytica HM-1:IMSS
Length = 490
Score = 32.7 bits (71), Expect = 4.0
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 203 RKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 382
RKA + ++ + K N+ +K K+Y+ + K+ + K L K +KI RK K
Sbjct: 146 RKAQLKRRMLKKRMSKRNIMKFFKRKQYQSKKISKKQVKKAAKILLKKYSKILARKNNHK 205
Query: 383 KS 388
K+
Sbjct: 206 KT 207
>UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 819
Score = 32.7 bits (71), Expect = 4.0
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 140 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 319
N+RV + V SK +I ++ K + Y ++ K+ +N Y+N+K K + KT+
Sbjct: 559 NVRVYVLIKNVVSK-KQIDIMNKLEGEQKLRYKERKKIREQNLYRNEKIKDRNGNHLKTK 617
Query: 320 AMRKALTKHEAK 355
L HE K
Sbjct: 618 NEEYYLLPHEKK 629
>UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondrial
precursor; n=17; Eutheria|Rep: 39S ribosomal protein
L55, mitochondrial precursor - Homo sapiens (Human)
Length = 128
Score = 32.7 bits (71), Expect = 4.0
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 173 ASKLSKIRVVRKAIARVY---IVYHQKMKVNLRNHYKNKKYK-PLDLRAKKTRAMRKALT 340
+S+ S RV R+A AR+Y +V +++R + P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 94
Query: 341 KHEAKIKTRKEIRKK 385
K EA++++RKE ++
Sbjct: 95 KREAQLQSRKEYEQE 109
>UniRef50_UPI0000498AB1 Cluster: hypothetical protein 21.t00051;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 21.t00051 - Entamoeba histolytica HM-1:IMSS
Length = 822
Score = 32.3 bits (70), Expect = 5.3
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +2
Query: 155 KVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNH---YKNKKYKPLDLRAKKTRAM 325
KV V K+SK+ + K + + +KM NLR Y KK L+ + K
Sbjct: 517 KVLRKVQKKMSKVNKLSKKNTKKAQLKVKKMMKNLRKQSKKYAQKKSAKLNKKISKINRR 576
Query: 326 RKALTKHEAKIKTRKEIRKKSL 391
+K K K + K + KK L
Sbjct: 577 KKVSKKINNKRRVNKRLNKKRL 598
>UniRef50_Q06SJ3 Cluster: Chloroplast 30S ribosomal protein S4; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S4 - Stigeoclonium helveticum (Green alga)
Length = 2922
Score = 31.9 bits (69), Expect = 7.0
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 170 VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKAL-TKH 346
V S+L +++ + R Y++ QK+K+ + + YK LDL+ K + + KAL K+
Sbjct: 2235 VFSRLYELKKAKTITERKYVLIKQKLKIF--SLFSALNYKLLDLKEKGSISSSKALELKN 2292
Query: 347 EAKIKTRKEIRKKSLFPPRVYAVKA 421
+ K ++++K F ++KA
Sbjct: 2293 QIIQKISQKMKKVKTFAKFKQSLKA 2317
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,791,050
Number of Sequences: 1657284
Number of extensions: 4903937
Number of successful extensions: 16172
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 15526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16116
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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