Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_C22
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40413-2|AAK39174.1| 296|Caenorhabditis elegans Hypothetical pr... 144 7e-35
Z47808-4|CAA87772.1| 235|Caenorhabditis elegans Hypothetical pr... 127 9e-30
AF100305-5|AAN65285.1| 353|Caenorhabditis elegans Hypothetical ... 31 0.78
AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical ... 31 0.78
AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical ... 31 0.78
Z66500-7|CAA91311.1| 182|Caenorhabditis elegans Hypothetical pr... 30 1.4
U88183-3|AAB52656.2| 593|Caenorhabditis elegans Warthog (hedgeh... 29 4.2
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 29 4.2
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 28 5.5
U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical pr... 28 5.5
U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical p... 28 5.5
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 28 5.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 7.3
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 7.3
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 7.3
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 27 9.6
>U40413-2|AAK39174.1| 296|Caenorhabditis elegans Hypothetical
protein C18B2.4 protein.
Length = 296
Score = 144 bits (348), Expect = 7e-35
Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 5/202 (2%)
Frame = +2
Query: 41 MSLNIAHAD--HGVLIHAGXCIILFSDNVSVEFYGNDTPEFKGIKEGRMYLTTHRMIYNS 214
MSLN +H G+LI+ G I+L++ NV ++F + P FK K G +YLT+HR+I+ +
Sbjct: 1 MSLNTSHTPDGQGILIYNGEMILLYTTNVKLKFEKYNVPAFKSTKSGALYLTSHRIIFMN 60
Query: 215 KKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNGNFIGEVKFKLTFKSGGAI 394
+ D +SF+ PF +++DV +EQP+ + N +KG V+ P GNF G +++L+F GG I
Sbjct: 61 ESKKDEFKSFAMPFNSVRDVKLEQPLLTPNYLKGWVQPMPGGNFDGCPEWRLSFPKGGCI 120
Query: 395 EYGQAMLKAAHLASR---HMAAGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPYSA 565
E+G+A+L+AA +ASR A A P +
Sbjct: 121 EFGEALLRAADMASRARPFAAPPAYGGNMQQQSGTTYYAAPPTYYLVQGTYQGFQAPTNV 180
Query: 566 FPDQPPPNSVFVSNTPPPYPGV 631
FP++PP +V+V + PPPYPG+
Sbjct: 181 FPERPPAQNVYVYDMPPPYPGI 202
>Z47808-4|CAA87772.1| 235|Caenorhabditis elegans Hypothetical
protein D2013.6 protein.
Length = 235
Score = 127 bits (306), Expect = 9e-30
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 2/199 (1%)
Frame = +2
Query: 41 MSLNIAHADHG--VLIHAGXCIILFSDNVSVEFYGNDTPEFKGIKEGRMYLTTHRMIYNS 214
MS+N A+ G VL++ G I++F+ V + ++ +G + G +YLT+HR+I+
Sbjct: 1 MSINTANTPDGLGVLLYNGETIVIFAQGVVMTLGTSENENLEGRRTGTIYLTSHRIIFMP 60
Query: 215 KKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNGNFIGEVKFKLTFKSGGAI 394
D ++SF PF ++QDV + QP+F AN + G A G GEVK+++TF GG I
Sbjct: 61 DPG-DWLKSFEIPFNSMQDVNLNQPIFGANYLCGIASAVQGGQMRGEVKWRMTFNRGGCI 119
Query: 395 EYGQAMLKAAHLASRHMAAGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPYSAFPD 574
E+GQ++L+A A R A P +FPD
Sbjct: 120 EFGQSLLQAVERAVRMRPENAPPAYSPPIGDFYSAPPAYYQPSPDQGPNGFNPTTDSFPD 179
Query: 575 QPPPNSVFVSNTPPPYPGV 631
QP P+ VF+S+ PPPYPG+
Sbjct: 180 QPNPSRVFMSSAPPPYPGI 198
>AF100305-5|AAN65285.1| 353|Caenorhabditis elegans Hypothetical
protein W04B5.3c protein.
Length = 353
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 554 PYSAFPDQPPPNSVFVSNTPPPYPGVT-GASYP 649
PY++ P PP+SV +S TP P P V +YP
Sbjct: 272 PYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304
>AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3a protein.
Length = 426
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 554 PYSAFPDQPPPNSVFVSNTPPPYPGVT-GASYP 649
PY++ P PP+SV +S TP P P V +YP
Sbjct: 272 PYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304
>AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3b protein.
Length = 426
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 554 PYSAFPDQPPPNSVFVSNTPPPYPGVT-GASYP 649
PY++ P PP+SV +S TP P P V +YP
Sbjct: 272 PYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304
>Z66500-7|CAA91311.1| 182|Caenorhabditis elegans Hypothetical
protein T05C12.9 protein.
Length = 182
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 586 KLSIC--VEYPTSLPWRDWSILPDRPWVFWGWW 678
K++ C V PTS W SI P PW W ++
Sbjct: 132 KITECCGVPLPTSTGWNQSSITPSSPWTSWFYY 164
>U88183-3|AAB52656.2| 593|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 6 protein.
Length = 593
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 569 PDQPPPNSVFVSNTPPPYPGVTGASYP 649
P PPP+S ++ N P P V +YP
Sbjct: 283 PLPPPPSSNYIDNVAPASPVVQSPAYP 309
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 479 VGYKEVAKHQLPYDEKQDEQLLTW 408
+GY +V K +L DE+++E++L W
Sbjct: 408 IGYLKVFKAKLDDDEEEEEEILNW 431
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 578 PPPNSVFVSNTPPPY 622
PPP SV V NTP P+
Sbjct: 2680 PPPKSVIVDNTPKPF 2694
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 578 PPPNSVFVSNTPPPY 622
PPP SV V NTP P+
Sbjct: 2707 PPPKSVIVDNTPKPF 2721
>U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical
protein K08F11.2 protein.
Length = 886
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +2
Query: 104 LFSDNVSVEFYGNDTPEFKGIKEG----RMYLTTHRMIYNS-KKNTDAMRSFS 247
L+S + SV + N+TP KGI+E RM L I +S +N DA+ S S
Sbjct: 129 LYSSSDSVGVFSNETPYVKGIREDLSRERMRLLEVDSILDSISENLDAILSSS 181
>U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical
protein K08D10.1 protein.
Length = 895
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +2
Query: 104 LFSDNVSVEFYGNDTPEFKGIKEG----RMYLTTHRMIYNS-KKNTDAMRSFS 247
L+S + SV + N+TP KGI+E RM L I +S +N DA+ S S
Sbjct: 129 LYSSSDSVGVFSNETPYVKGIREDLSRERMRLLEVDSILDSISENLDAILSSS 181
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 569 PDQPPPNSVFVSNTPPPYPGVTGASYP 649
P+ PPP++ + PPP P + ++ P
Sbjct: 322 PNPPPPSAGYFFQAPPPAPASSSSTVP 348
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 551 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 649
PP P Q PP P PYPG G P
Sbjct: 707 PPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPP 739
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 551 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 649
PP+S P PPP S + PP P + A P
Sbjct: 130 PPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPP 162
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 551 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 649
PP+S P PPP S + PP P + A P
Sbjct: 153 PPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPP 185
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 551 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 649
PP+S P PPP S + PP P + A P
Sbjct: 403 PPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPP 435
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +2
Query: 551 PPYSAFPDQPPPNSV-FVSNTPPPYP-GVTGASYP 649
PPY+ P PPP S +V YP G G YP
Sbjct: 10 PPYTQQPGYPPPGSAGYVPQQGGYYPQGQQGPYYP 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,968,185
Number of Sequences: 27780
Number of extensions: 303572
Number of successful extensions: 1072
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -