Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_C20
(429 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110490-2|CAB54440.1| 91|Caenorhabditis elegans Hypothetical ... 141 2e-34
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 28 2.5
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 27 5.7
Z83221-5|CAB05706.2| 578|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF039048-9|AAB94233.1| 362|Caenorhabditis elegans Hypothetical ... 27 7.5
AF039048-8|AAT68896.1| 367|Caenorhabditis elegans Hypothetical ... 27 7.5
Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical pr... 26 10.0
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 26 10.0
AL032639-10|CAA21634.1| 108|Caenorhabditis elegans Hypothetical... 26 10.0
AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila od... 26 10.0
>AL110490-2|CAB54440.1| 91|Caenorhabditis elegans Hypothetical
protein Y48B6A.2 protein.
Length = 91
Score = 141 bits (342), Expect = 2e-34
Identities = 61/90 (67%), Positives = 74/90 (82%)
Frame = +2
Query: 56 MAKRPKKVGITGKSGTRYGASLRKMVKKLEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 235
MAKR KKVGI GK GTRYGASLRKM KKLEV QH++YTCSFCGK+AMKR GIW+C +C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKC 60
Query: 236 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 325
+ VAGGA+V+ T A++ RS +RRLR++K
Sbjct: 61 HKVVAGGAYVYGTVTAATVRSTIRRLRDLK 90
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 152 QHAKYTCSFCGKDAMKRSCVGIWSCKRC 235
++ KY C+ C R G+WSCK C
Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 125 YVERHRNVCQICQ*FQPFWDVWPFWET 45
Y +H NVC + F D W W+T
Sbjct: 841 YARQHENVCVMFASIPNFKDFWSEWDT 867
>Z83221-5|CAB05706.2| 578|Caenorhabditis elegans Hypothetical
protein C49A1.9 protein.
Length = 578
Score = 26.6 bits (56), Expect = 7.5
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +2
Query: 122 RKMVKKLEVTQHAKYTCSFCGKDA----MKRSCVGIWSCKRCKRTV-AGGAWVFSTTAAS 286
R+ +L++ ++T + C K A MK S S TV + W+F+TT
Sbjct: 95 RESSTELKIAVKMEFTANTCSKTATANTMKNSVATDTSYLEYTMTVNSESQWIFTTTITL 154
Query: 287 SCRSAVRRLREVK*F 331
+C R + K F
Sbjct: 155 NCPVGYRLFKRPKGF 169
>AF039048-9|AAB94233.1| 362|Caenorhabditis elegans Hypothetical
protein F16B4.2a protein.
Length = 362
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 197 KRSCVGIWSCKRCKRTVAGGAWVFSTT 277
K C+ W+C C +T+ +W F +T
Sbjct: 333 KEKCILDWTCSTCDKTIE--SWYFRST 357
>AF039048-8|AAT68896.1| 367|Caenorhabditis elegans Hypothetical
protein F16B4.2b protein.
Length = 367
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 197 KRSCVGIWSCKRCKRTVAGGAWVFSTT 277
K C+ W+C C +T+ +W F +T
Sbjct: 338 KEKCILDWTCSTCDKTIE--SWYFRST 362
>Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical
protein F17C11.1 protein.
Length = 172
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 179 CGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRS 298
CGK + R+C + +C W F+TTAA++ S
Sbjct: 69 CGKSPVNRNCTALVPDSKCV-----FKWAFATTAAATACS 103
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 19 FSVNFCLGSVSQNGQTSQKGWNYWQIWHTLRCLST*NGQKAGSNPTRKVYLLILW 183
+S C + + QK +N W+ H +RCL N +N T+ L LW
Sbjct: 405 YSCEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPNTSHF-ANITKIKDALDLW 458
>AL032639-10|CAA21634.1| 108|Caenorhabditis elegans Hypothetical
protein Y38F1A.9 protein.
Length = 108
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 95 SGTRYGASLRKMVKKLEVTQHAK 163
+G RY + ++KMV K VT H K
Sbjct: 45 TGDRYVSKIKKMVGKFTVTLHIK 67
>AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila
odd-skipped-like protein2 protein.
Length = 254
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +2
Query: 59 AKRPKKVGITGKSGTRYGASLRKMVKKLEVTQHAKYTCSFCGK 187
A RPKK I + S ++ + T Y+C CGK
Sbjct: 117 AARPKKEFICKYCDRHFTKSYNLLIHERTHTDERPYSCDVCGK 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,510,048
Number of Sequences: 27780
Number of extensions: 173933
Number of successful extensions: 603
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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