Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_C15
(537 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 152 4e-38
SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase |Schizo... 31 0.14
SPBC29A3.05 |||chromatin remodeling complex subunit|Schizosaccha... 26 3.1
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 25 5.4
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 25 5.4
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 5.4
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 25 7.2
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 25 9.5
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 25 9.5
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 152 bits (368), Expect = 4e-38
Identities = 72/146 (49%), Positives = 98/146 (67%), Gaps = 2/146 (1%)
Frame = +2
Query: 104 IESAGIPKXSIKXVYIGNVCSANLGQAPAXQAVIFAGLPKSTICTTVNKVCASGMKSIML 283
+E I + V++GNV SANLGQ PA Q + AGLP+S +CTTVNKVCASGMK+ +L
Sbjct: 40 LERVNIKPSDVDEVFMGNVVSANLGQNPARQCALGAGLPRSIVCTTVNKVCASGMKATIL 99
Query: 284 AAQGLQTGAQDIILAGGMESMSNVPFYLKRGE--TSYGGMQLVDGIVFDGLTDVYNKFHM 457
AQ + TG +I++AGG ESMSN P+Y + YG ++LVDG++ DGL+D Y+ M
Sbjct: 100 GAQTIMTGNAEIVVAGGTESMSNAPYYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPM 159
Query: 458 GNCAENTAKKLQITXQDQDEYAVNSY 535
GN AE A++ I QD +A++SY
Sbjct: 160 GNAAELCAEEHSIDRASQDAFAISSY 185
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 1 VVIASAVRXPLGAFRGRFSSV 63
V I SAVR P+G+F G F+S+
Sbjct: 6 VYIVSAVRTPMGSFGGSFASL 26
>SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 30.7 bits (66), Expect = 0.14
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 239 TVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSN 352
T CA+G +I A ++ G D+I+AGG ES N
Sbjct: 165 TTTTACAAGCHAIGDAFNFIKLGHADVIIAGGSESCIN 202
>SPBC29A3.05 |||chromatin remodeling complex
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 139
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 199 CNICRFAKKYHMYNCKQSMC 258
CN+C + KY NC S C
Sbjct: 102 CNVCGYWGKYACQNCGTSYC 121
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 391 RNAVS*WNSV*WAHRCVQQISHGKLC*KHSKKITNYXT 504
++A S N+ WA R +I KLC H I Y T
Sbjct: 43 KHATSCMNAGVWARRMASEIQLHKLCNGHKNIIHFYNT 80
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 274 RFHARGTYFVYSCTYGTF 221
RF R Y +YSC YG+F
Sbjct: 467 RFLRRLLYHLYSCQYGSF 484
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +3
Query: 435 MCTTNFTWEIVLKTQQKNYKLLXKIKMNMLSIV 533
+ + + W + KT++ YKL+ M + S+V
Sbjct: 409 IAASGYVWHVGSKTERSRYKLMLDCVMIITSVV 441
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 209 AGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPF 361
AG P I T V K + + +A + GA+ IILAGG ++++ + +
Sbjct: 154 AGCPHVVISTPVRKDGTVAPEIVYIANK---IGAEAIILAGGAQAIAAMAY 201
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 206 FAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDI 319
F+G P S TTV++V + + + LQT D+
Sbjct: 62 FSGFPLSQSRTTVSRVSLGSRQHSSSSIRKLQTNVSDV 99
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1258
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 236 TTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVDGI 415
T VN+ G I+L+ G++ +DI + ++ P Y+ +G T + Q D +
Sbjct: 202 TPVNRYTTIGPMLIVLSVSGIKEIMEDIKRKKQDQELNESPCYVLQG-TGFVEKQWKDVV 260
Query: 416 VFD 424
V D
Sbjct: 261 VGD 263
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,034,453
Number of Sequences: 5004
Number of extensions: 40245
Number of successful extensions: 121
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -