Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_C09
         (807 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC16A11.10c |oca8||cytochrome b5 |Schizosaccharomyces pombe|ch...    44   3e-05
SPBC29A10.16c |||cytochrome b5 |Schizosaccharomyces pombe|chr 2|...    37   0.003
SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces...    34   0.027
SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces...    29   0.78 
SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces p...    27   4.1  
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom...    27   4.1  

>SPCC16A11.10c |oca8||cytochrome b5 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 129

 Score = 43.6 bits (98), Expect = 3e-05
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +1

Query: 691 KLFTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGGE 807
           K  T EE+   +TR D  +++ ++VYD+ KFL  HPGGE
Sbjct: 4   KTITVEEVLKHNTRDDLYIVVKDKVYDISKFLDAHPGGE 42


>SPBC29A10.16c |||cytochrome b5 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 124

 Score = 37.1 bits (82), Expect = 0.003
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 688 MKLFTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGG 804
           +K F  EE+   +   D  ++I+ +VYDV  F  +HPGG
Sbjct: 3   VKYFEPEEIVEHNNSKDMYMVINGKVYDVSNFADDHPGG 41


>SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 147

 Score = 33.9 bits (74), Expect = 0.027
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 700 TREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGGE 807
           T+EEL    T+ D  + I  +VY+V  +L  HP G+
Sbjct: 75  TKEELAKHKTKEDCWIAIRGKVYNVSAYLPYHPAGQ 110


>SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 306

 Score = 29.1 bits (62), Expect = 0.78
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +1

Query: 571 QFDRFFTYLTIQKYI*SYKQIGGSVVI*FKLINIIMEGEMKLFTREELK 717
           +FD+ FTY     Y+  +K       + FKL  +++E  +  +T EELK
Sbjct: 148 EFDKLFTY-----YLCKFKDQEHIYTLIFKLHKLLIENPLPSYTSEELK 191


>SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 145

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 700 TREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGG 804
           T EEL    +  D  + I  +VY+V  +L  HP G
Sbjct: 73  TAEELAKHCSPDDCWMAIRGKVYNVTAYLPYHPVG 107


>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 601

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 731 RVDRDFSSSRVNNFISPSIIMFINLN*ITTLPPICL 624
           ++D+D SS    N IS  +I F +++    +P +CL
Sbjct: 104 KLDKDSSSVNYENQISKPLITFSDIHETVNVPFLCL 139


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,159,263
Number of Sequences: 5004
Number of extensions: 65302
Number of successful extensions: 126
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)