Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_C09
(807 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529 48 1e-05
01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592 44 2e-04
05_01_0065 + 461182-461271,462222-462288,462408-462664 43 3e-04
08_02_0958 - 23044708-23046045,23046131-23046363,23047059-230471... 42 8e-04
08_02_0956 + 23026108-23027146,23027255-23027395,23029334-230295... 42 8e-04
02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478 41 0.001
02_05_0889 - 32532495-32533832,32533919-32534151,32534321-325344... 38 0.007
09_02_0530 + 10285844-10287217 37 0.022
05_02_0031 - 5832475-5832696,5832789-5833064,5833303-5833380,583... 31 1.1
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 29 4.4
07_01_0887 + 7380332-7380370,7381286-7381640,7382752-7382886,738... 29 5.8
>12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529
Length = 150
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 691 KLFTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGGE 807
KLF+ ++ ++R D ++IH +VYDV KFL +HPGGE
Sbjct: 11 KLFSASDVVGHASRKDCWVVIHGKVYDVTKFLEDHPGGE 49
>01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592
Length = 135
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 691 KLFTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGGE 807
K+ T EE+ +T+ D LII +VY+V KFL +HPGG+
Sbjct: 5 KVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGD 43
>05_01_0065 + 461182-461271,462222-462288,462408-462664
Length = 137
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +1
Query: 691 KLFTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGGE 807
K++T EE+ +++ D LII +VY+V KFL +HPGG+
Sbjct: 7 KVYTLEEVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGD 45
>08_02_0958 -
23044708-23046045,23046131-23046363,23047059-23047199,
23047296-23048334
Length = 916
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 691 KLFTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGG 804
K FT E++ S++ A +++H VYD FL +HPGG
Sbjct: 542 KQFTMSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGG 579
>08_02_0956 +
23026108-23027146,23027255-23027395,23029334-23029566,
23029652-23030989
Length = 916
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 691 KLFTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGG 804
K FT E++ S++ A +++H VYD FL +HPGG
Sbjct: 542 KQFTMSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGG 579
>02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478
Length = 138
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 676 MEGEMKLFTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGGE 807
M G +++ +E+ + R D LII +VYDV F+ EHPGG+
Sbjct: 1 MAGGKAVYSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGD 44
>02_05_0889 -
32532495-32533832,32533919-32534151,32534321-32534461,
32534564-32535521
Length = 889
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 697 FTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGG 804
+T E++ +T A +I+H VYD FL +HPGG
Sbjct: 516 YTMSEVRRHTTPESAWIIVHGHVYDCTGFLKDHPGG 551
>09_02_0530 + 10285844-10287217
Length = 457
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 688 MKLFTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGGE 807
+++ + EEL++ ++R D + I +VYDV ++ HPGG+
Sbjct: 16 VRMISSEELRAHASRDDLWISISGDVYDVTAWVPHHPGGD 55
>05_02_0031 -
5832475-5832696,5832789-5833064,5833303-5833380,
5833464-5833550,5833639-5833699,5833792-5833880,
5834001-5834098,5834197-5834296,5834876-5834953
Length = 362
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 124 LPPLIIVDS-FETLINWHEIK*NEMR*HDLTRYIR 23
LPPLI+ S +E I+W K + +R HDLT +R
Sbjct: 219 LPPLILFPSQWEYFISWSSYKLHSIRRHDLTDALR 253
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 706 EELKSRSTRADAVLIIHNEVYDVXKFLLE 792
EE+ +R AD ++I+H +YD + L+
Sbjct: 346 EEIPARKVDADEIMILHERIYDSKRIALK 374
>07_01_0887 +
7380332-7380370,7381286-7381640,7382752-7382886,
7383029-7383138
Length = 212
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 691 KLFTREELKSRSTRADAVLIIHNEVYDVXKFLLEHPGG 804
+L + EE+K T ++ VY++ ++ HPGG
Sbjct: 140 RLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGG 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,780,640
Number of Sequences: 37544
Number of extensions: 348297
Number of successful extensions: 571
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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