Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_C08
         (781 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    29   0.055
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.3  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 0.055
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 200 LITYNLHHVKCNTFAIKEEMGFKDEEIKM 286
           L+  N+HH+  NTF +K EM   D  + +
Sbjct: 210 LLGNNMHHILGNTFGLKPEMKTSDRGVPL 238


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -2

Query: 759 YFYRSIG-HFATNICAIIG-GVFTVAGIFDALLYHSINAFEN 640
           Y+Y   G H A  +  I    V T   +FD L  H++  F+N
Sbjct: 116 YYYAFFGVHLAYGVVIIYSICVQTEKSVFDFLCRHTVEYFQN 157


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 642 NKLLLGKTG*FIITVHKVFKNILKSSISHFAK 547
           +KLL    G  ++ V ++FKN+L++    F +
Sbjct: 378 DKLLNPDLGLSLLQVAQIFKNLLENHYEEFVR 409


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 465 RPNDCKKRCLC 433
           RP DC++ C+C
Sbjct: 558 RPADCQQNCMC 568


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 465 RPNDCKKRCLC 433
           RP DC + C+C
Sbjct: 558 RPPDCGQNCMC 568


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,321
Number of Sequences: 336
Number of extensions: 3616
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)