Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_C08
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical p...    85   7e-17
Z79602-2|CAB01889.1|  380|Caenorhabditis elegans Hypothetical pr...    42   4e-04
AC084152-6|AAK39316.1|  286|Caenorhabditis elegans Hypothetical ...    41   9e-04
Z81536-8|CAB04369.2|  352|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL034488-1|CAA22455.1|  625|Caenorhabditis elegans Hypothetical ...    29   2.8  

>Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical
           protein C50F4.12 protein.
          Length = 439

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
 Frame = +2

Query: 116 VDXSFGFYXQYFDLSGKNVRCLATTQPKLITYNLHHVKCNTFAIKEEMGFKDEEIKMLLL 295
           +D   G+  Q F LS K  R +   +P++I +    ++       +E+ F   ++KML++
Sbjct: 259 IDSRLGWLQQQFKLSAKATREIIVKEPRIIMFGTGPIERLVKMFNKELNFTTNQLKMLVM 318

Query: 296 NKPKLWMINQRMLIERFNYIHNIMKIPHTTILENAGVLLSRVFRIKQRHLFLQSLGRAQY 475
             P+++M++ +++ + + Y+ ++MKI + TILE+  +L   +  IK RH FL+ LGRA Y
Sbjct: 319 EDPRIFMMDSKLVSKTYKYVRDVMKINNETILEHPFILRCSLSVIKSRHDFLKRLGRANY 378

Query: 476 D--PKKVNYVPIKALVEKTDVEFCNNFAKCDIDDFNMFL 586
               KK + + I    E TD E  +    CD+     FL
Sbjct: 379 QLAEKKESKIDIS---EVTDPEGSSK-ESCDLVSLEHFL 413


>Z79602-2|CAB01889.1|  380|Caenorhabditis elegans Hypothetical
           protein K09E9.2 protein.
          Length = 380

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = -2

Query: 756 FYRSIGHFATNICAIIGGVFTVAGIFDALLYHSINAFENKLLLGK 622
           F +S   F  ++CAI+GGVF +A + D  +YHS    ++++  GK
Sbjct: 334 FRQSFASFLVSLCAIVGGVFAMAQLVDITIYHSSRYMKSRIAGGK 378


>AC084152-6|AAK39316.1|  286|Caenorhabditis elegans Hypothetical
           protein Y102A11A.6 protein.
          Length = 286

 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = -2

Query: 735 FATNICAIIGGVFTVAGIFDALLYHSINAFENKLLLGK 622
           F T+ICA++GG FTVAGI D+  + +I+    K  LGK
Sbjct: 248 FLTSICAVVGGTFTVAGIIDSTFF-TISELVKKQRLGK 284


>Z81536-8|CAB04369.2|  352|Caenorhabditis elegans Hypothetical
           protein F40D4.11 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 609 IITVHKVFKNILKSSISH-FAKLLQNSTSVFST 514
           IITVHK ++N +K  IS    KL++  TSV  T
Sbjct: 311 IITVHKHYRNAVKHIISQCVGKLIKRDTSVRDT 343


>AL034488-1|CAA22455.1|  625|Caenorhabditis elegans Hypothetical
           protein Y54G11A.1 protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +2

Query: 407 LLSRVFRIKQRHLFLQSLGRAQYDPKKVNYVPIKALVEKTDVEFCNNF 550
           LLS++ R       + ++ + ++  KK+   P+++ VEK +  F  NF
Sbjct: 560 LLSKMPRNSHNFYIIDTVRKIEFYRKKMRCAPLRSTVEKIEFYFLKNF 607


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,001,495
Number of Sequences: 27780
Number of extensions: 308720
Number of successful extensions: 769
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)