Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_C07
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   3.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   4.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.5  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 488 LIERQRDEKLCRHNLNGKCVHC 553
           L E  R+E + RH ++G+ + C
Sbjct: 244 LFEASREEYVTRHLIDGRIIGC 265


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 314 QSSTSSETHRKPLSESSRPVQSSEPGP 394
           QSS SS +H+       RP  +S   P
Sbjct: 242 QSSGSSRSHQPATKSKPRPAPASRNAP 268


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 528 LCRHNFSSLCLSIKPETLYN 469
           + R+NF  LC  +K  T +N
Sbjct: 240 IARYNFERLCNKLKRATRFN 259


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +3

Query: 318 LPQAQRPTGNPSVKVPDQFSHQSQVLPRLKSHYQYPP 428
           LP       +PSV V   +  QS + P      + PP
Sbjct: 701 LPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPP 737


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +3

Query: 318 LPQAQRPTGNPSVKVPDQFSHQSQVLPRLKSHYQYPP 428
           LP       +PSV V   +  QS + P      + PP
Sbjct: 593 LPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPP 629


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 312 NSLPQAQRPTGNPSVKVPDQFSHQSQVLPRLKSHYQYPPHLLVLQRKMK 458
           +S PQ   PTG P V+   +  H+    PR     Q    LL L++K +
Sbjct: 91  SSSPQTSAPTGPPIVRCALR-KHKPNRKPRTPFTTQ---QLLALEKKFR 135


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +2

Query: 290 VNGAVLFEQSSTSSETHRKPLSESSRPVQSSEPGPSTS 403
           +NG +  E    + ++   P+S S     ++ P P+T+
Sbjct: 2   MNGGIYEESPPPAPQSAATPISSSGMTSPAAAPPPATT 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,700
Number of Sequences: 336
Number of extensions: 4093
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)