Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_C07
(738 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15061| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_2359| Best HMM Match : zf-NPL4 (HMM E-Value=2.8e-12) 46 2e-05
SB_57324| Best HMM Match : ig (HMM E-Value=1e-26) 32 0.42
SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_49090| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_37261| Best HMM Match : rve (HMM E-Value=2.1e-08) 30 1.7
SB_28745| Best HMM Match : RVT_1 (HMM E-Value=0.01) 30 1.7
SB_14127| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_4582| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.7) 30 1.7
SB_38430| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_58439| Best HMM Match : L15 (HMM E-Value=1e-05) 30 2.3
SB_49950| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-29) 29 5.2
SB_42716| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_32366| Best HMM Match : Kinesin (HMM E-Value=0) 28 6.9
SB_51486| Best HMM Match : F5_F8_type_C (HMM E-Value=3.3e-22) 28 9.1
SB_41285| Best HMM Match : ITAM (HMM E-Value=3.1) 28 9.1
SB_39853| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 9.1
SB_19278| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 9.1
SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 28 9.1
SB_20001| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_18969| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-38) 28 9.1
SB_5362| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-38) 28 9.1
>SB_15061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 63.3 bits (147), Expect = 2e-10
Identities = 44/141 (31%), Positives = 65/141 (46%)
Frame = +2
Query: 149 IYEALNLNSFAFTLHKDRQRKEEITSSKSRQLRDCGLCHGDMIYLNPVNGAVLFEQSSTS 328
+ E L++ ++++ DR + I SS + + L HGDM+YL V S+ +
Sbjct: 95 VAEQLSIPKRGWSVYTDRSKSTRIESSSRKTVASVPLKHGDMVYLFKTGAGV----SNVT 150
Query: 329 SETHRKPLSESSRPVQSSEPGPSTSKVTLXXXXXXXXXXEEDEVDLQLYKVSGLIERQRD 508
SE +Q ++P EEDE+D+ L K GLI R+RD
Sbjct: 151 SEVS----------LQDTKPENQV---------------EEDEIDVLLSKQDGLIHRKRD 185
Query: 509 EKLCRHNLNGKCVHCTPLEPW 571
+C H N KCVHC PLE +
Sbjct: 186 PHMCHHGDNSKCVHCVPLEDY 206
>SB_2359| Best HMM Match : zf-NPL4 (HMM E-Value=2.8e-12)
Length = 66
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 659 LEELSCKIKPGCREHPAXPRGICSKC 736
L+++SCKIK GC EHP P GIC+KC
Sbjct: 2 LKDISCKIKEGCAEHPPWPGGICTKC 27
>SB_57324| Best HMM Match : ig (HMM E-Value=1e-26)
Length = 947
Score = 32.3 bits (70), Expect = 0.42
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Frame = +2
Query: 47 MSRSQKMLLRVQS-PEGTARVE-VLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRKE-- 214
++R + L R+Q P+ A + ++ V + + ER+YE + N + H RKE
Sbjct: 246 VTRLRGQLARLQKEPDIRAEYDAIIKQQVESGIIERVYELESANKVHYLPHHAVVRKEAK 305
Query: 215 ----EITSSKSRQLRDCGLCHGDMIYLNPVNGAVLFE 313
I S + R G+C D +++ P +L+E
Sbjct: 306 TTKVRIVYDASSKERKRGVCLNDCLHVGPALTPLLYE 342
>SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 32.3 bits (70), Expect = 0.42
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Frame = +2
Query: 47 MSRSQKMLLRVQS-PEGTARVE-VLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRKE-- 214
++R + L R+Q P+ A + ++ V + + ER+YE + N + H RKE
Sbjct: 365 VTRLRGQLARLQKEPDIRAEYDAIIKQQVESGIIERVYELESANKVHYLPHHAVVRKEAK 424
Query: 215 ----EITSSKSRQLRDCGLCHGDMIYLNPVNGAVLFE 313
I S + R G+C D +++ P +L+E
Sbjct: 425 TTKVRIVYDASSKERKRGVCLNDCLHVGPALTPLLYE 461
>SB_49090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Frame = +2
Query: 47 MSRSQKMLLRVQS-PEGTARVE-VLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRKE-- 214
++R + L R+Q P+ A + ++ V + + ER+YE + N + H RKE
Sbjct: 40 VTRLRGQLARLQKEPDIRAEYDAIIKQQVESGIIERVYELESANKVHYLPHHAVVRKEAK 99
Query: 215 ----EITSSKSRQLRDCGLCHGDMIYLNPVNGAVLFE 313
I S + R G+C D +++ P +L++
Sbjct: 100 TTKVRIVYDASSKERKRGVCLNDCLHVGPALTPLLYK 136
>SB_37261| Best HMM Match : rve (HMM E-Value=2.1e-08)
Length = 757
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +2
Query: 110 VLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRKE------EITSSKSRQLRDCGLCHGD 271
++ V + + ER+YE + N + H RKE I S + R G+C D
Sbjct: 15 IIKQQVESGIIERVYELESANKVHYLPHHAVVRKEAKTTKVRIVYDASSKERKRGVCLND 74
Query: 272 MIYLNPVNGAVLFE 313
+++ P +L+E
Sbjct: 75 CLHVGPALTPLLYE 88
>SB_28745| Best HMM Match : RVT_1 (HMM E-Value=0.01)
Length = 315
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +2
Query: 110 VLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRKE------EITSSKSRQLRDCGLCHGD 271
++ V + + ER+YE + N + H RKE I S + R G+C D
Sbjct: 15 IIKQQVESGIIERVYELESANKVHYLPHHAVVRKEAKTTKVRIVYDASSKERKRGVCLND 74
Query: 272 MIYLNPVNGAVLFE 313
+++ P +L+E
Sbjct: 75 CLHVGPALTPLLYE 88
>SB_14127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1185
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 278 YLNPVNGAVLFEQSSTSSETHRKPLSESSRPVQSSEPGPSTSKV 409
++ VNG V+ SST S + KP++ V SS P ++S +
Sbjct: 648 HVKTVNGKVVSSSSSTISTSSGKPMTSEGPTVTSSNPTVTSSSM 691
>SB_4582| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.7)
Length = 420
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 47 MSRSQKMLLRVQS-PEGTARVE-VLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRKEEI 220
++R + L R+Q P+ A + ++ V + + ER+YE + N + H RKE
Sbjct: 256 VTRLRGQLARLQKEPDIRAEYDAIIKQQVESGIIERVYELESANKVHYLPHHAVVRKEAK 315
Query: 221 TSSKSRQLRDC 253
T+ S+++ DC
Sbjct: 316 TTKVSKEI-DC 325
>SB_38430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 596 NIKHMSFHSYLRKI---TSXNFVSLEELSCKIKPGCREHPAXPRGICSKC 736
N K + S L K+ T+ N+ +EL ++K G E + P GI +KC
Sbjct: 153 NSKPDFWKSLLEKLGTNTTMNYEQFQELLRRLKIGTDERTSTPNGITNKC 202
>SB_58439| Best HMM Match : L15 (HMM E-Value=1e-05)
Length = 203
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 134 HLFERIYEALNLNSFAFTLHKDR-QRKEEIT 223
H FE++YE LNLN + + R KE+IT
Sbjct: 51 HGFEKVYEPLNLNRLQYLIDSGRLNPKEQIT 81
>SB_49950| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-29)
Length = 349
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = -2
Query: 524 VDIIFHPSVFQLNQKLCTIANLLHLPLEHQEVGRVLVM*L*TWKDLALMTELVWN 360
+ I+ H +V L++ + I +L + L E GR++++ + L + +LVWN
Sbjct: 104 ISILSHIAVITLDKYIYIIYSLRYASLVTGERGRLVILLIWALSLLVALIQLVWN 158
>SB_42716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 369
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 579 NT*RNITLNTCHSTHTYGRLHLXTLCHLKNFPAKSN 686
NT ITL+ + HTY + H+ CH N +++
Sbjct: 151 NTILFITLSVVYYQHTYSKCHVPATCHKCNLKKRND 186
>SB_32366| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1492
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = -2
Query: 263 DTVHNLAAVSICWM*FLPCAVCPCAE*MRKSSDSELRIFARIDAPSHRSPAPPLALYL 90
D V L+++++ W+ P VC CA+ D L+ P H +P + L +
Sbjct: 890 DPVRKLSSLNVRWLYSYPVVVCCCADIHGNPEDGPLK-----PLPDHHAPFASMKLVI 942
>SB_51486| Best HMM Match : F5_F8_type_C (HMM E-Value=3.3e-22)
Length = 181
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 560 LEPWDEEYLKEHNIKHMSFHSYLR-KITSXNFVSLEELSCKIKP 688
L+ W +Y E++ + FHSYL K+ N +LS +KP
Sbjct: 31 LDQWVTQYKLEYSQNRVHFHSYLSGKVFQGNHDRNSKLSHILKP 74
>SB_41285| Best HMM Match : ITAM (HMM E-Value=3.1)
Length = 254
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 62 KMLLRVQSPEGTARVEVLDSDVTAHLFERIYEALNLNS 175
++ ++ P+GT DS+ T ER+YEAL +S
Sbjct: 57 RLEVKSDGPQGTFTFLTRDSEKTGLFLERLYEALGESS 94
>SB_39853| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 254
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 560 LEPWDEEYLKEHNIKHMSFHSYLR-KITSXNFVSLEELSCKIKP 688
L+ W +Y E++ + FHSYL K+ N +LS +KP
Sbjct: 80 LDQWVTQYKLEYSQNRVHFHSYLSGKVFQGNHDRNSKLSHILKP 123
>SB_19278| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 303
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 560 LEPWDEEYLKEHNIKHMSFHSYLR-KITSXNFVSLEELSCKIKP 688
L+ W +Y E++ + FHSYL K+ N +LS +KP
Sbjct: 74 LDQWVTQYKLEYSQNRVHFHSYLSGKVFQGNHDRNSKLSHILKP 117
>SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 318 LPQA--QRPTGNPSVKVPDQFSHQSQVLPRLKSHYQYPP 428
+PQA Q PTGNP P + + P YQ PP
Sbjct: 468 IPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQGYQQPP 506
>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
Length = 1086
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 320 STSSETHRKPLSESSRPVQSSEPGPSTSKVTL 415
S+SS + +PLS +SRP + +P S+ L
Sbjct: 692 SSSSSANEEPLSTTSRPQPAQQPAQSSGATPL 723
>SB_20001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 560 LEPWDEEYLKEHNIKHMSFHSYLR-KITSXNFVSLEELSCKIKP 688
L+ W +Y E++ + FHSYL K+ N +LS +KP
Sbjct: 279 LDQWVTQYKLEYSQNRVHFHSYLSGKVFQGNHDRNSKLSHILKP 322
>SB_18969| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-38)
Length = 488
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 560 LEPWDEEYLKEHNIKHMSFHSYLR-KITSXNFVSLEELSCKIKP 688
L+ W +Y E++ + FHSYL K+ N +LS +KP
Sbjct: 407 LDQWVTQYKLEYSQNRVHFHSYLSGKVFQGNHDRNSKLSHILKP 450
>SB_5362| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-38)
Length = 199
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 560 LEPWDEEYLKEHNIKHMSFHSYLR-KITSXNFVSLEELSCKIKP 688
L+ W +Y E++ + FHSYL K+ N +LS +KP
Sbjct: 126 LDQWVTQYKLEYSQNRVHFHSYLSGKVFQGNHDRNSKLSHILKP 169
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,467,457
Number of Sequences: 59808
Number of extensions: 522584
Number of successful extensions: 1624
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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