Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_C07
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   5.6  
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    23   9.8  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   9.8  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   9.8  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 178 RIHSAQGQTAQGRNHIQQIETAARLWTVSWRHD 276
           R+HS +G  A  +   ++ ET    W  +W  D
Sbjct: 868 RVHSRRGTAAGAQLRKEERETTIAEWQATWDSD 900


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 518 IIFHPSVFQLNQKLCTIANLLHLPLEHQEV 429
           I+F P V +L   LC + N L + L+H ++
Sbjct: 804 IVFDPFV-ELFITLCIVVNTLFMALDHHDM 832


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 20  VLQFYVDEKMSRSQKMLLRVQSPEGTARVEVLDSDVTA 133
           V Q++ + K  RS +     Q  EGTARV  L++ + A
Sbjct: 166 VQQWFEELKEKRSLQEKSTNQGAEGTARVRELEARLEA 203


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = -2

Query: 578 LRPKVLTGYSERICH*DYVDIIFHPSVFQLNQKLCTIANLLHLPLEHQEVGRVL 417
           L  K+L+   +R+      ++  H      N   C  A  LHLP  HQ    +L
Sbjct: 79  LHDKLLSPVPQRLDGGAAYELEQHTKQSLSNYFRCAGAGTLHLPASHQSDANML 132


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 521 RHNLNGKCVHCTPLEPWDEEY 583
           +HNL     H T + P+D+E+
Sbjct: 305 KHNLENPWRHGTRMAPFDQEF 325


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 521 RHNLNGKCVHCTPLEPWDEEY 583
           +HNL     H T + P+D+E+
Sbjct: 305 KHNLENPWRHGTRMAPFDQEF 325


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,557
Number of Sequences: 2352
Number of extensions: 18159
Number of successful extensions: 75
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)