Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_C07
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical ... 94 1e-19
AF003386-5|AAK82898.1| 529|Caenorhabditis elegans Hypothetical ... 94 1e-19
AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical ... 94 1e-19
AF003386-1|AAK82899.1| 529|Caenorhabditis elegans Hypothetical ... 94 1e-19
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 31 0.64
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 31 1.1
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 31 1.1
Z75543-5|CAA99872.2| 270|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z50858-4|CAA90724.2| 156|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical p... 29 4.5
Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical p... 29 4.5
>AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.4a protein.
Length = 527
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Frame = +2
Query: 452 DEVDLQLYKVSGLIERQRDEKLCRHNLNGKCVHCTPLEPWDEEYLKEHNIKHMSFHSYLR 631
++VD+ L G I+R + CRH + KC +C P++P+DEEYLKE +IKHMSFH+++R
Sbjct: 12 NDVDVFLSTQDGQIQRPKGPN-CRHPVRQKCTNCLPVDPFDEEYLKEKDIKHMSFHAHVR 70
Query: 632 KITSXNFVS------LEELSCKIKPGCREHPAXPRGICSKC 736
K+ LE C +KP C H P+GIC+KC
Sbjct: 71 KLLGSQGKGTTLKKPLENFRCSLKPNCDAHKPFPKGICTKC 111
>AF003386-5|AAK82898.1| 529|Caenorhabditis elegans Hypothetical
protein F59E12.4b protein.
Length = 529
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Frame = +2
Query: 452 DEVDLQLYKVSGLIERQRDEKLCRHNLNGKCVHCTPLEPWDEEYLKEHNIKHMSFHSYLR 631
++VD+ L G I+R + CRH + KC +C P++P+DEEYLKE +IKHMSFH+++R
Sbjct: 12 NDVDVFLSTQDGQIQRPKGPN-CRHPVRQKCTNCLPVDPFDEEYLKEKDIKHMSFHAHVR 70
Query: 632 KITSXNFVS------LEELSCKIKPGCREHPAXPRGICSKC 736
K+ LE C +KP C H P+GIC+KC
Sbjct: 71 KLLGSQGKGTTLKKPLENFRCSLKPNCDAHKPFPKGICTKC 111
>AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.5a protein.
Length = 527
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Frame = +2
Query: 452 DEVDLQLYKVSGLIERQRDEKLCRHNLNGKCVHCTPLEPWDEEYLKEHNIKHMSFHSYLR 631
++VD+ L G I+R + CRH + KC +C P++P+DEEYLKE +IKHMSFH+++R
Sbjct: 12 NDVDVFLSTQDGQIQRPKGPN-CRHPVRQKCTNCLPVDPFDEEYLKEKDIKHMSFHAHVR 70
Query: 632 KITSXNFVS------LEELSCKIKPGCREHPAXPRGICSKC 736
K+ LE C +KP C H P+GIC+KC
Sbjct: 71 KLLGSQGKGTTLKKPLENFRCSLKPNCDAHKPFPKGICTKC 111
>AF003386-1|AAK82899.1| 529|Caenorhabditis elegans Hypothetical
protein F59E12.5b protein.
Length = 529
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Frame = +2
Query: 452 DEVDLQLYKVSGLIERQRDEKLCRHNLNGKCVHCTPLEPWDEEYLKEHNIKHMSFHSYLR 631
++VD+ L G I+R + CRH + KC +C P++P+DEEYLKE +IKHMSFH+++R
Sbjct: 12 NDVDVFLSTQDGQIQRPKGPN-CRHPVRQKCTNCLPVDPFDEEYLKEKDIKHMSFHAHVR 70
Query: 632 KITSXNFVS------LEELSCKIKPGCREHPAXPRGICSKC 736
K+ LE C +KP C H P+GIC+KC
Sbjct: 71 KLLGSQGKGTTLKKPLENFRCSLKPNCDAHKPFPKGICTKC 111
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 702 CSLQPGLILQESSSSDTKXLDVIFRKYEWNDMCLMLCSFKYSSSQG 565
C L PG+ L+ + TK +D I R++ N M C +KY +G
Sbjct: 253 CKLSPGIPLKPMLAHPTKGIDEIMRRFR-NQ--TMTCEWKYDGERG 295
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 95 TARVEVLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRKEEITSSKSRQLR 247
T V+VLD +T +++ +N+N F KDR+ + K+ LR
Sbjct: 79 TLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTEVLR 129
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 95 TARVEVLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRKEEITSSKSRQLR 247
T V+VLD +T +++ +N+N F KDR+ + K+ LR
Sbjct: 79 TLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTEVLR 129
>Z75543-5|CAA99872.2| 270|Caenorhabditis elegans Hypothetical
protein K01D12.5 protein.
Length = 270
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 333 RPTGNPSVKV-PDQFSHQSQVLPRLKSHYQYPPHL 434
RP P ++ P + QVLP +++YQYP +L
Sbjct: 53 RPYNQPQLQQKPSVLTQSYQVLPESRNYYQYPQYL 87
>Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical
protein Y70C5C.2 protein.
Length = 414
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 717 RGQAGCSLQPGLILQESSSSDTKXLDVIFRKYEWNDMCL 601
R Q C Q G I+ S ++ + + +F +YE NDM +
Sbjct: 177 RAQQNCENQCGSIVSILSPNENRYVGALFPRYESNDMII 215
>Z50858-4|CAA90724.2| 156|Caenorhabditis elegans Hypothetical
protein F44A6.4 protein.
Length = 156
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 47 MSRSQKMLLRVQS--PEGTARVEVLDSDVTAHLFERIYEALNLNSFAFTLHKDRQRKEEI 220
M + K ++R+Q +G + + VTAHL+ Y L FA ++QRKE
Sbjct: 42 MLTTLKFVIRLQQGHAQGNLKPNCFNDTVTAHLYTFPYNILTNCIFACEDFINKQRKESA 101
Query: 221 TSSKSRQ 241
+ K Q
Sbjct: 102 ENLKRSQ 108
>Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical
protein F32D8.12b protein.
Length = 460
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 315 SLPQAQRPTGNPSVKVPDQFSHQSQVLPRLKSHYQYPPHLLVLQ 446
SLP Q+ GN SV+ + Q R +SH+ PP +VL+
Sbjct: 17 SLPDLQKIVGNSSVRTQESVRRQ---FARDESHFIAPPPAVVLE 57
>Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical
protein F32D8.12a protein.
Length = 474
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 315 SLPQAQRPTGNPSVKVPDQFSHQSQVLPRLKSHYQYPPHLLVLQ 446
SLP Q+ GN SV+ + Q R +SH+ PP +VL+
Sbjct: 17 SLPDLQKIVGNSSVRTQESVRRQ---FARDESHFIAPPPAVVLE 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,897,989
Number of Sequences: 27780
Number of extensions: 386556
Number of successful extensions: 1225
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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