Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_C05
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          26   1.5  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    26   1.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.4  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    25   3.4  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    24   4.5  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/51 (21%), Positives = 28/51 (54%)
 Frame = +2

Query: 314 TMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQR 466
           T+ +N     L+DN + +P   +   ++ ++  L P QL ++++ +  +Q+
Sbjct: 183 TVPVNTQYNALNDNYVTSPQPSQVTSRQLQQQQLQPNQLHQQLQQQQQQQQ 233


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +2

Query: 431 IKKVKSRYDKQREKTILNVKPKLQNFQKINSNLSVSAIFPSGNMTN 568
           +K V  +   QR++ +LNV  ++ N++ I     V AI+ + NM N
Sbjct: 263 LKMVLGQTQDQRQRVLLNVAKEVPNWEIIVK--KVKAIYHTLNMFN 306


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 15/61 (24%), Positives = 30/61 (49%)
 Frame = +2

Query: 344  LSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 523
            ++DN ++T ++KKHR   K  +     Q  + +K++    R +  ++     Q+   I S
Sbjct: 2968 ITDNLVLTILKKKHRRSVKYSNLTSDSQSYETIKNKNSLMRFECCIDCS---QDASSITS 3024

Query: 524  N 526
            N
Sbjct: 3025 N 3025


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 339 RRFRFNFIVLLVSFCFLFAI 280
           RR+R+ F +  +SFC L  I
Sbjct: 29  RRYRYKFRLAFLSFCLLVVI 48


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 452 YDKQREKTILNVKPKLQNFQKINSNLSVSAIFPSGNMT 565
           +D Q     L++  KLQ   K   +L V  +FP+ + T
Sbjct: 162 FDAQEFIRSLSICAKLQRIPKDRRDLYVQGVFPNDDKT 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,738
Number of Sequences: 2352
Number of extensions: 11480
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)