Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_C04
         (487 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4QPR8 Cluster: IP03474p; n=5; Endopterygota|Rep: IP034...    84   2e-15
UniRef50_Q4T4I3 Cluster: Chromosome undetermined SCAF9631, whole...    66   5e-10
UniRef50_UPI00015B5790 Cluster: PREDICTED: similar to GA13019-PA...    64   2e-09
UniRef50_UPI0000E49E6A Cluster: PREDICTED: similar to GA13019-PA...    55   1e-06
UniRef50_Q9NAA4 Cluster: Putative uncharacterized protein; n=2; ...    50   2e-05
UniRef50_UPI000155BE11 Cluster: PREDICTED: hypothetical protein,...    37   0.21 
UniRef50_Q54KD0 Cluster: TPR repeat-containing protein; n=1; Dic...    37   0.28 
UniRef50_A6WJW1 Cluster: RarD protein, DMT superfamily transport...    34   2.0  
UniRef50_UPI0000519D97 Cluster: PREDICTED: similar to polyribonu...    33   3.4  
UniRef50_Q8KU95 Cluster: EF0064; n=1; Enterococcus faecalis|Rep:...    33   4.5  
UniRef50_Q7S2X8 Cluster: Predicted protein; n=5; Pezizomycotina|...    32   6.0  
UniRef50_P41820 Cluster: Brefeldin A resistance protein; n=2; Sc...    32   6.0  
UniRef50_Q6LSI7 Cluster: Putative uncharacterized protein; n=2; ...    32   7.9  

>UniRef50_Q4QPR8 Cluster: IP03474p; n=5; Endopterygota|Rep: IP03474p
           - Drosophila melanogaster (Fruit fly)
          Length = 82

 Score = 83.8 bits (198), Expect = 2e-15
 Identities = 33/60 (55%), Positives = 45/60 (75%)
 Frame = +2

Query: 95  MGNWKLEVGRMAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQD 274
           MG W LEV +M MY +FPV LF  FNQP+YFEEWVT  KR+++PPE++   E +Q+ I++
Sbjct: 1   MGTWVLEVAKMGMYMAFPVTLFHLFNQPEYFEEWVTKKKRELYPPESKSHHEELQRAIRE 60


>UniRef50_Q4T4I3 Cluster: Chromosome undetermined SCAF9631, whole
           genome shotgun sequence; n=13; Euteleostomi|Rep:
           Chromosome undetermined SCAF9631, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 78

 Score = 65.7 bits (153), Expect = 5e-10
 Identities = 26/65 (40%), Positives = 44/65 (67%)
 Frame = +2

Query: 107 KLEVGRMAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKK 286
           K+E+ RM +Y SFPV +F+  NQ +YFEE++   KR+IFPP+ +  R+ ++   + MR +
Sbjct: 4   KIEIFRMMLYLSFPVAMFWISNQAEYFEEYIVKRKREIFPPDEEFHRKHLEDFKERMRAR 63

Query: 287 QMQSL 301
           + Q +
Sbjct: 64  KEQRI 68


>UniRef50_UPI00015B5790 Cluster: PREDICTED: similar to GA13019-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA13019-PA - Nasonia vitripennis
          Length = 89

 Score = 64.1 bits (149), Expect = 2e-09
 Identities = 28/68 (41%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = +2

Query: 104 WKLEVGRMAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMR- 280
           W+ EV +M MY SFPV  F +FN P+ FEE VT  K+  +PP +   RE I+ +I+++  
Sbjct: 10  WQWEVAKMFMYMSFPVMCFHYFNTPQIFEEEVTKIKKLHYPPTSPEQREEIENMIREVNA 69

Query: 281 KKQMQSLE 304
           K+++++L+
Sbjct: 70  KRELRALK 77


>UniRef50_UPI0000E49E6A Cluster: PREDICTED: similar to GA13019-PA;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to GA13019-PA - Strongylocentrotus purpuratus
          Length = 79

 Score = 54.8 bits (126), Expect = 1e-06
 Identities = 22/60 (36%), Positives = 40/60 (66%)
 Frame = +2

Query: 125 MAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKKQMQSLE 304
           M++Y  FPV +F++FNQ   FE +V+   ++++PPE++  R+ ++ L Q MR K  + L+
Sbjct: 1   MSIYVMFPVTMFYYFNQTDLFETYVSKKVKEMYPPESKMHRQELESLRQRMRIKYEEKLK 60


>UniRef50_Q9NAA4 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 90

 Score = 50.4 bits (115), Expect = 2e-05
 Identities = 23/68 (33%), Positives = 39/68 (57%)
 Frame = +2

Query: 95  MGNWKLEVGRMAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQD 274
           MG WKLE GR  +  +FPVG F+ FNQP  F+E++   +       ++   E  ++L+  
Sbjct: 1   MGGWKLETGRFLLLITFPVGAFWLFNQPTIFKEFMRGYRIPDSSAGDKAMAEFKEQLLAT 60

Query: 275 MRKKQMQS 298
            RK++ ++
Sbjct: 61  KRKEEYEN 68


>UniRef50_UPI000155BE11 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein, partial - Ornithorhynchus anatinus
          Length = 71

 Score = 37.1 bits (82), Expect = 0.21
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 125 MAMYTSFPVGLFFFFNQPKYFEEWVTNTK 211
           M +Y SFPV +F+  NQ  YFEE+V   K
Sbjct: 1   MVLYLSFPVAMFWISNQADYFEEYVIKRK 29


>UniRef50_Q54KD0 Cluster: TPR repeat-containing protein; n=1;
           Dictyostelium discoideum AX4|Rep: TPR repeat-containing
           protein - Dictyostelium discoideum AX4
          Length = 1663

 Score = 36.7 bits (81), Expect = 0.28
 Identities = 22/71 (30%), Positives = 38/71 (53%)
 Frame = +2

Query: 158 FFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKKQMQSLESK*TKFINNII 337
           FF+F  P Y EE V+   +  F  E Q  +E ++KL Q++ K   +S E +    ++++ 
Sbjct: 504 FFYFRDPYYLEE-VSQMDKNNFVSEGQRSKEKLEKLKQEIIKSPFKSSEYRRPTNLSDV- 561

Query: 338 *FLLSNVIKYI 370
             L  ++ KYI
Sbjct: 562 --LYEDLEKYI 570


>UniRef50_A6WJW1 Cluster: RarD protein, DMT superfamily transporter
           precursor; n=2; Shewanella baltica|Rep: RarD protein,
           DMT superfamily transporter precursor - Shewanella
           baltica OS185
          Length = 302

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 259 LNRFSIMLVFWWEDLSFCIGYPFFKIFWLVEKKEQSN 149
           LN+  I     W  L+ C+GYP +  FWL +K + +N
Sbjct: 149 LNQLVISQTLAWPTLAICLGYPIY--FWLRQKTDTNN 183


>UniRef50_UPI0000519D97 Cluster: PREDICTED: similar to
           polyribonucleotide nucleotidyltransferase 1; n=2;
           Coelomata|Rep: PREDICTED: similar to polyribonucleotide
           nucleotidyltransferase 1 - Apis mellifera
          Length = 770

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 18/64 (28%), Positives = 38/64 (59%)
 Frame = +2

Query: 179 KYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKKQMQSLESK*TKFINNII*FLLSNV 358
           ++  E+V+N  R+IF   + HD+ +    I D+R + ++ +++  +K+I N +  + SN+
Sbjct: 282 EFVREFVSNELREIFN-YHFHDKISRDNAIFDLRNRMLEKIKNHDSKYIENAL-KIFSNI 339

Query: 359 IKYI 370
            K I
Sbjct: 340 SKEI 343


>UniRef50_Q8KU95 Cluster: EF0064; n=1; Enterococcus faecalis|Rep:
          EF0064 - Enterococcus faecalis (Streptococcus faecalis)
          Length = 47

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 2  VDVINCDKLANREKSKYNNLISKNLKR 82
          V  ++CD+LA RE  KYN+L+  N K+
Sbjct: 2  VAYVDCDQLARRELGKYNHLMYSNCKK 28


>UniRef50_Q7S2X8 Cluster: Predicted protein; n=5;
           Pezizomycotina|Rep: Predicted protein - Neurospora
           crassa
          Length = 91

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 95  MGNWKLEVGRMAMYTSFPVGLFFFF 169
           MG   LEV +  MY  FP+G+ F+F
Sbjct: 1   MGGLNLEVFKFGMYLMFPIGIMFYF 25


>UniRef50_P41820 Cluster: Brefeldin A resistance protein; n=2;
            Schizosaccharomyces pombe|Rep: Brefeldin A resistance
            protein - Schizosaccharomyces pombe (Fission yeast)
          Length = 1530

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 262  FLNRFSIMLVFWWEDLSFCIGYPFFKIF 179
            FL RFS+     W +L   +GY FF IF
Sbjct: 1476 FLERFSMRYTHRWRNLGIFVGYVFFNIF 1503


>UniRef50_Q6LSI7 Cluster: Putative uncharacterized protein; n=2;
           Photobacterium profundum|Rep: Putative uncharacterized
           protein - Photobacterium profundum (Photobacterium sp.
           (strain SS9))
          Length = 116

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -2

Query: 327 FINLVHLDSRLCICFFLISCINF*IASLSCWFSGGKICLFVLVTHSSKYFGWLKKKNN 154
           FINL    S LC    L    +F +  +S  F  G I L V    ++ YF +L+ K+N
Sbjct: 52  FINLTF--SALCAYLILKLIFDFWLNIISLSFVSGSIALIVTSLGNAVYFSYLRSKHN 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,454,922
Number of Sequences: 1657284
Number of extensions: 7752842
Number of successful extensions: 21157
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21154
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)