Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_C02
(663 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 33 0.91
BC098576-1|AAH98576.1| 918|Homo sapiens inner centromere protei... 31 3.7
AY714053-1|AAU04398.1| 918|Homo sapiens inner centromere protei... 31 3.7
AF282265-1|AAF87584.1| 919|Homo sapiens inner centromere protei... 31 3.7
AF163441-1|AAF34136.1| 460|Homo sapiens golgin 67 protein. 31 3.7
AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD p... 30 6.4
M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein. 30 8.5
M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein. 30 8.5
BC150329-1|AAI50330.1| 636|Homo sapiens GOLGA8A protein protein. 30 8.5
BC093673-1|AAH93673.1| 603|Homo sapiens golgi autoantigen, golg... 30 8.5
AF204231-1|AAF28463.1| 631|Homo sapiens 88-kDa Golgi protein pr... 30 8.5
AB020662-1|BAA74878.1| 632|Homo sapiens KIAA0855 protein protein. 30 8.5
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 33.1 bits (72), Expect = 0.91
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = -2
Query: 359 SGAGSDDLRSVERDTVNSXQDDSRRV----RGLREGGDCRNHTGSDECSVVQXRSYQRRS 192
SG+ S ER V+ Q SR V R ++ GD H+GS R S
Sbjct: 1839 SGSHHSHTTSQERSDVSRGQSGSRSVSRQTRNEKQSGDGSRHSGSRHHEASSRADSSRHS 1898
Query: 191 VDHXGAVLGQRTNSRHDSAVGQRS 120
G G RT+ S+V Q S
Sbjct: 1899 QVGQGQSSGPRTSRNQGSSVSQDS 1922
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = -2
Query: 293 SRRVRGLREGGDCRNHTGSDECSVVQXRSYQRRSVDHXGAVLGQRTNSRHDSAVGQRS 120
SR R + GD H+GS R S G G R + R S+V Q S
Sbjct: 3810 SRETRNEEQSGDGSRHSGSRHHEASTQADSSRHSQSGQGESAGSRRSRRQGSSVSQDS 3867
>BC098576-1|AAH98576.1| 918|Homo sapiens inner centromere protein
antigens 135/155kDa protein.
Length = 918
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 360 ERRGQRRPQECREGHR*QHXGRQQESAGLERGRRLQEPHRERRVQRCTXQ-ELPE 199
+R +RR QE RE R + R+QE E+ R+L E R R +R + EL E
Sbjct: 687 QREQERREQERREQERREQERREQERR--EQERQLAEQERRREQERLQAERELQE 739
>AY714053-1|AAU04398.1| 918|Homo sapiens inner centromere protein
protein.
Length = 918
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 360 ERRGQRRPQECREGHR*QHXGRQQESAGLERGRRLQEPHRERRVQRCTXQ-ELPE 199
+R +RR QE RE R + R+QE E+ R+L E R R +R + EL E
Sbjct: 687 QREQERREQERREQERREQERREQERR--EQERQLAEQERRREQERLQAERELQE 739
>AF282265-1|AAF87584.1| 919|Homo sapiens inner centromere protein
INCENP protein.
Length = 919
Score = 31.1 bits (67), Expect = 3.7
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -1
Query: 360 ERRGQ-RRPQECREGHR*QHXGRQQESAGLERGRRLQEPHRERRVQRCTXQ-ELPE 199
ERR Q RR QE RE R + R+QE E+ R+L E R R +R + EL E
Sbjct: 687 ERREQERREQERREQERREQERREQERR--EQERQLAEQERRREQERLQAERELQE 740
>AF163441-1|AAF34136.1| 460|Homo sapiens golgin 67 protein.
Length = 460
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -2
Query: 275 LREGGDCRNHTGSDECSVVQXRSYQRRSVDHXGAVLGQRTNSRHDSAVGQRSHQAWFGXG 96
L E D R H E +Q R + R + +L + +S D+A G HQA G G
Sbjct: 281 LEEKADLREHVEKLELGFIQYR--RERCHQNVHRLLTEPGDSAKDAAPGGGHHQAGPGRG 338
Query: 95 GRE 87
G E
Sbjct: 339 GEE 341
>AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD
phosphatase protein.
Length = 961
Score = 30.3 bits (65), Expect = 6.4
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = -2
Query: 365 EVSGAGSDDLRSVERDTVNSXQDDSRRVRGLREGGDCRNHTGSDECSVVQX--RSYQRRS 192
++ G GSDD S +R ++ R G R G D R S+ + R ++R+
Sbjct: 863 DILGEGSDDSDSEKRRPEEQEEEPQPRKPGTRRGADARAPASSERSAAGGRGPRGHKRKL 922
Query: 191 VDHXGAVLGQRTNSRHD 141
+ A R +S D
Sbjct: 923 NEEDAASESSRESSNED 939
>M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein.
Length = 1084
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = -2
Query: 293 SRRVRGLREGGDCRNHTGSDECSVVQXRSYQRRSVDHXGAVLGQRTNSRHDSAVGQRS 120
SR R + GD H+GS R S G G R + R S+V Q S
Sbjct: 833 SRETRNEEQSGDGSRHSGSRHHEASTQADSSRHSQSGQGESAGSRRSRRQGSSVSQDS 890
>M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein.
Length = 797
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = -2
Query: 293 SRRVRGLREGGDCRNHTGSDECSVVQXRSYQRRSVDHXGAVLGQRTNSRHDSAVGQRS 120
SR R + GD H+GS R S G G R + R S+V Q S
Sbjct: 546 SRETRNEEQSGDGSRHSGSRHHEASTQADSSRHSQSGQGESAGSRRSRRQGSSVSQDS 603
>BC150329-1|AAI50330.1| 636|Homo sapiens GOLGA8A protein protein.
Length = 636
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 275 LREGGDCRNHTGSDECSVVQXRSYQRRSVDHXGAVLGQRTNSRHDSAVGQRSHQAWFGXG 96
L E D R H E +Q R + R + +L + +S D++ G HQA G G
Sbjct: 457 LEEKADLREHVEKLELGFIQYR--RERCHQNVHRLLTEPGDSAKDASPGGGHHQAGPGQG 514
Query: 95 GRE 87
G E
Sbjct: 515 GEE 517
>BC093673-1|AAH93673.1| 603|Homo sapiens golgi autoantigen, golgin
subfamily a, 8A protein.
Length = 603
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 275 LREGGDCRNHTGSDECSVVQXRSYQRRSVDHXGAVLGQRTNSRHDSAVGQRSHQAWFGXG 96
L E D R H E +Q R + R + +L + +S D++ G HQA G G
Sbjct: 424 LEEKADLREHVEKLELGFIQYR--RERCHQNVHRLLTEPGDSAKDASPGGGHHQAGPGQG 481
Query: 95 GRE 87
G E
Sbjct: 482 GEE 484
>AF204231-1|AAF28463.1| 631|Homo sapiens 88-kDa Golgi protein
protein.
Length = 631
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 275 LREGGDCRNHTGSDECSVVQXRSYQRRSVDHXGAVLGQRTNSRHDSAVGQRSHQAWFGXG 96
L E D R H E +Q R + R + +L + +S D++ G HQA G G
Sbjct: 452 LEEKADLREHVEKLELGFIQYR--RERCHQNVHRLLTEPGDSAKDASPGGGHHQAGPGQG 509
Query: 95 GRE 87
G E
Sbjct: 510 GEE 512
>AB020662-1|BAA74878.1| 632|Homo sapiens KIAA0855 protein protein.
Length = 632
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 275 LREGGDCRNHTGSDECSVVQXRSYQRRSVDHXGAVLGQRTNSRHDSAVGQRSHQAWFGXG 96
L E D R H E +Q R + R + +L + +S D++ G HQA G G
Sbjct: 453 LEEKADLREHVEKLELGFIQYR--RERCHQNVHRLLTEPGDSAKDASPGGGHHQAGPGQG 510
Query: 95 GRE 87
G E
Sbjct: 511 GEE 513
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,203,727
Number of Sequences: 237096
Number of extensions: 1486267
Number of successful extensions: 3324
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3321
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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