Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_C02
(663 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 26 0.37
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 26 0.37
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.85
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 6.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 7.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 7.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 7.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 7.9
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 25.8 bits (54), Expect = 0.37
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -2
Query: 374 FCLEVSGAGSDDLRSVERDTVNSXQDDSRRVRGLREGGDCRNHTGSDECSVV 219
+CL + + DD +V+ D + D + R G C +GSD C+ +
Sbjct: 75 YCLLEAFSLVDDEANVDEDIMLGLLPDQLQERAQSVMGKCLPTSGSDNCNKI 126
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 25.8 bits (54), Expect = 0.37
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -2
Query: 374 FCLEVSGAGSDDLRSVERDTVNSXQDDSRRVRGLREGGDCRNHTGSDECSVV 219
+CL + + DD +V+ D + D + R G C +GSD C+ +
Sbjct: 75 YCLLEAFSLVDDEANVDEDIMLGLLPDQLQERAQSVMGKCLPTSGSDNCNKI 126
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.85
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Frame = -2
Query: 347 SDDLRSVERDTVNSXQDDSRRVRGLREGGDCRNHTGSDECSVVQXRSYQR--RSVDHXGA 174
S+ LRS R + SR E G+ + G CS + R Y++ R D
Sbjct: 214 SNSLRSRSRSFQRTSSCHSRYEDSRHEDGNSYRNDGERSCSRDRSREYKKKDRRYDQLHN 273
Query: 173 V----LGQRTNSRHDSAVGQRSHQAW 108
V L +RT+ R S +R +++
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSY 299
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 6.0
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 564 W*LPHRK*TDLKRLLYYCETLP-NKFCIIL 650
W LPH LLYY ++L + F +IL
Sbjct: 303 WQLPHNSTNPPNILLYYRDSLALSVFALIL 332
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.9
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = -2
Query: 347 SDDLRSVERDTVNSXQDDSRRVRGLREGGDCRNHTGSDECSVVQXRSYQR--RSVDHXGA 174
S+ LRS R + SR E + + G CS + R Y++ R D
Sbjct: 214 SNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHN 273
Query: 173 V----LGQRTNSRHDSAVGQRSHQAW 108
V L +RT+ R S +R +++
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSY 299
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.9
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = -2
Query: 347 SDDLRSVERDTVNSXQDDSRRVRGLREGGDCRNHTGSDECSVVQXRSYQR--RSVDHXGA 174
S+ LRS R + SR E + + G CS + R Y++ R D
Sbjct: 214 SNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHN 273
Query: 173 V----LGQRTNSRHDSAVGQRSHQAW 108
V L +RT+ R S +R +++
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSY 299
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.9
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = -2
Query: 347 SDDLRSVERDTVNSXQDDSRRVRGLREGGDCRNHTGSDECSVVQXRSYQR--RSVDHXGA 174
S+ LRS R + SR E + + G CS + R Y++ R D
Sbjct: 214 SNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHN 273
Query: 173 V----LGQRTNSRHDSAVGQRSHQAW 108
V L +RT+ R S +R +++
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSY 299
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.9
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = -2
Query: 347 SDDLRSVERDTVNSXQDDSRRVRGLREGGDCRNHTGSDECSVVQXRSYQR--RSVDHXGA 174
S+ LRS R + SR E + + G CS + R Y++ R D
Sbjct: 214 SNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHN 273
Query: 173 V----LGQRTNSRHDSAVGQRSHQAW 108
V L +RT+ R S +R +++
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSY 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,381
Number of Sequences: 438
Number of extensions: 2929
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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