Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_C01
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34921| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 7e-33
SB_128| Best HMM Match : SH3BP5 (HMM E-Value=3.3) 66 3e-11
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18) 30 2.1
SB_20969| Best HMM Match : DUF164 (HMM E-Value=0.6) 29 2.8
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) 28 6.5
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_34921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 137 bits (332), Expect = 7e-33
Identities = 61/167 (36%), Positives = 100/167 (59%)
Frame = +1
Query: 211 MSWGVELXDQYDNLAAHTHKGIEFLDKYGNFVKERCAIELEYAGKLRRLVKNYQPKRKXX 390
MSWGV+L DQ+D +AAH+ +GI+ + + F KERC IE EYA +LR+L K++ K+K
Sbjct: 1 MSWGVDLWDQFDLVAAHSERGIDLVKRISRFAKERCRIEAEYAKELRKLAKSFHTKKKHE 60
Query: 391 DEYQYTACKAFKQLLQELGDFAGQREVVAENLQSNVVRELHLLAKELREERKQHLNEGAK 570
DE QY++ KAF +++E D AGQ E++AEN+ + + +ELH L EL E+++H ++ K
Sbjct: 61 DELQYSSHKAFSDVVKETDDKAGQHELIAENMSAEIYKELHKLHSELEHEKRKHCSDAKK 120
Query: 571 QMGVLNTSIGXXXXXXXXXXXXXXXXXXXXXTFQKADADLNLSRAXL 711
+ ++ S+ +QKA+ D N+++ +
Sbjct: 121 EQDDMDHSMRALDTSKKAYEKAKFEAEQALQAYQKAEQDSNIAKVQI 167
>SB_128| Best HMM Match : SH3BP5 (HMM E-Value=3.3)
Length = 410
Score = 66.1 bits (154), Expect = 3e-11
Identities = 29/66 (43%), Positives = 46/66 (69%)
Frame = +1
Query: 352 RLVKNYQPKRKXXDEYQYTACKAFKQLLQELGDFAGQREVVAENLQSNVVRELHLLAKEL 531
+L KN+QPK+K +E ++T K F +++E D AGQ E++ ENL S+V++EL L EL
Sbjct: 2 KLAKNFQPKKKAEEELKFTFHKGFFDVVKETDDIAGQHELIVENLNSSVLKELQDLHSEL 61
Query: 532 REERKQ 549
+ +RK+
Sbjct: 62 KTDRKK 67
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 37.9 bits (84), Expect = 0.008
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Frame = +1
Query: 229 LXDQYDNLAAHTHKGIEFLDKYGNFVKERCAIELEYAGKLRRLVKNYQP---KRKXXDEY 399
L +Q A T + FL + K+ +E EY+ L RL + K K +
Sbjct: 25 LSEQLKGYDARTEGKVLFLADLQEYCKKMSEVETEYSKNLDRLSDRFLDRLQKFKAQRKE 84
Query: 400 QYTACKAFKQLLQELGDFAGQREVVAENLQSNVVRELHLLAKELREERKQHLNEGAKQMG 579
+ T + +LL E + A QR+ ++NL +N+ ++ + + K+ L + G
Sbjct: 85 RSTTMDVWHKLLVETKNRAKQRQSFSDNLANNIANRFMSMSDDYQRISKKKLRKYHTMFG 144
Query: 580 VLNTS 594
T+
Sbjct: 145 ESKTA 149
>SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18)
Length = 808
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 475 AENLQSNVVRELHLLAKELREERKQHLNEGAKQMGVLNTS 594
++ +QS + RE K+LR E+KQ +NE K +L TS
Sbjct: 109 SKKIQSALERENREQQKKLRLEKKQAVNETEKAKEILRTS 148
>SB_20969| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 478
Score = 29.5 bits (63), Expect = 2.8
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Frame = +1
Query: 223 VELXDQYDNLAAHTHKGIEFLDKYGNFVKERCAI-ELEYAGKLRRLV-KNYQPKRKXXDE 396
++ DQ D + H+ E L + N +KE + E ++ L+++ K ++ K + E
Sbjct: 79 IKKDDQVDEYSQQIHQLQEALAEKTNEIKESMFMTEKKHKDTLQQMEHKFFEEKVRLQQE 138
Query: 397 YQYT----ACKAFKQLLQELGDFAGQREVVAENLQSNVVRELHLLAKELREERKQHLNEG 564
A +A + + L + R V EN++ N E H+ E ++ + HL E
Sbjct: 139 ASKKIAELAERAHTEAISNLDETT--RSVYKENVRVNAALEFHMKEGEELKKERDHLLED 196
Query: 565 AKQM 576
K++
Sbjct: 197 NKEL 200
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 28.7 bits (61), Expect = 4.9
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Frame = +1
Query: 241 YDNLAAHTHKGIEFLDKYGNFVKERCAIELEYAGKLRRLVKNYQPKRKXXDE--YQYTAC 414
Y A K ++ LD N KE +E EY + L R+ DE ++
Sbjct: 586 YHEKIAELEKLVQSLDARPNNTKE---LE-EYKAECEILQDEVAQYRRLSDEDRHRLDEY 641
Query: 415 KAFKQLLQELGDFAG----QREVVAENLQSNVVRELHLLAKELREERKQHLNE 561
KAF + LQ+ D Q+ S++V++LH KE +ERK+ +E
Sbjct: 642 KAFAKQLQDNLDKISLEKLQQSQEHSKKISDLVKQLHSFNKEKEKERKKWKDE 694
>SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12)
Length = 695
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 468 SCRGKSSIKCSPRVAPARQRI--ARGKKATFKRRSKTNGSSEHF 593
SC G + C+P+ +P RI A G+ +R+ +TN S + F
Sbjct: 652 SCPGACASSCAPKCSPGCCRILSATGQNRRRQRQVETNKSKKDF 695
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 495 CSPRVAPARQRIARG--KKATFKRRSKTNGSSEH 590
CS RVA + QR+A G +KA+ R + S H
Sbjct: 1076 CSHRVASSSQRVASGSHRKASGSHRERRGASGSH 1109
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,746,288
Number of Sequences: 59808
Number of extensions: 393247
Number of successful extensions: 1028
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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