Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_B22
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    26   0.40 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   3.7  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   6.5  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 15  APPLLSPCLAGRAXRP 62
           APPL+SP LA  A RP
Sbjct: 200 APPLVSPFLAAMAHRP 215


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 20/69 (28%), Positives = 28/69 (40%)
 Frame = +3

Query: 201 VDYWGEGRIVNGGLYSGFRNCYNVNRQYQEVSNGPDKGRKIPNRIPVRDENDCDTRAYIK 380
           V Y GE   + G   +G     N    +   SN    G +  N IPV  +      AY++
Sbjct: 100 VAYPGELLAILGSSGAGKTTLLNT-LTFHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQ 158

Query: 381 DDSVKIVTL 407
            D + I TL
Sbjct: 159 QDDLFIGTL 167


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 20/69 (28%), Positives = 28/69 (40%)
 Frame = +3

Query: 201 VDYWGEGRIVNGGLYSGFRNCYNVNRQYQEVSNGPDKGRKIPNRIPVRDENDCDTRAYIK 380
           V Y GE   + G   +G     N    +   SN    G +  N IPV  +      AY++
Sbjct: 100 VAYPGELLAILGSSGAGKTTLLNT-LTFHTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQ 158

Query: 381 DDSVKIVTL 407
            D + I TL
Sbjct: 159 QDDLFIGTL 167


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -1

Query: 745 SSLITKPTLSSCKDFVIVTALL*SPVDTYLNSRSIRSCLLRKATCESIIV 596
           +S +TK  + +   F++  +LL  P  TY      ++ L     C  II+
Sbjct: 278 NSKMTKDGVYNTLFFIVYVSLLLGPHPTYFGKTGRKTVLKTNKYCNFIIL 327


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 613  TWLSSTSNFLWICCSSTCRPGTTTR 687
            TW SST+   W   ++T R  TTTR
Sbjct: 1041 TWWSSTTTSPW-WTTTTTRRTTTTR 1064


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +3

Query: 261 CYNVNRQYQEVSNGPDKGRKIPNRIPVRDENDCDTRAYIKD 383
           C+  N  Y+ + NG +    +   + + ++N C  R  +KD
Sbjct: 12  CFERNLSYKVMYNGNNNVTDLVEYVLLNEDNPC-ARKCVKD 51


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 497 RHSVDDDHADALVNDSRNVS 438
           R  V +D   AL+NDSR V+
Sbjct: 199 RFRVINDGIQALINDSRKVT 218


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 21  PLLSPCLAGRAXRPTLSGPIXQAPQLRVPTWXXSLRTQSLP 143
           P  +P   G   +PT+       PQ   PT   S  TQ+ P
Sbjct: 56  PYAAPA-PGHGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHP 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,788
Number of Sequences: 336
Number of extensions: 3575
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)