Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_B22
         (799 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    33   0.008
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    32   0.024
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        28   0.29 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   4.7  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   4.7  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 33.5 bits (73), Expect = 0.008
 Identities = 23/77 (29%), Positives = 37/77 (48%)
 Frame = +2

Query: 221 EDRQRGTVFGLPQLLQRKPTVPRGQQRARQGSQDPQQDPGARRERLRHPGLHQG*LGQNS 400
           + +Q+G  +  PQL Q++    + QQR RQ  Q  QQ    + ER   P L Q    +  
Sbjct: 256 QQQQQGERYVPPQLRQQR----QQQQRPRQQQQQQQQQQQQQGERYVPPQLRQ---QRQQ 308

Query: 401 DAHERAHHSEQRQRHYE 451
             H++    +Q+QR  +
Sbjct: 309 QQHQQQQQQQQQQRQQQ 325



 Score = 31.1 bits (67), Expect = 0.041
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = +2

Query: 221 EDRQRGTVFGLPQLLQRKPTVPRGQQRARQGSQDPQQDPGARRERLRHPGLHQG*LGQNS 400
           + +Q+G  +  PQL Q++      QQ+ +Q  Q  QQ    +R++ +     Q    Q  
Sbjct: 289 QQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQ-QQQQR 347

Query: 401 DAHERAHHSEQRQRHYE 451
              +R    +Q+Q+H +
Sbjct: 348 QQQQRQQQQQQQQQHQQ 364



 Score = 30.3 bits (65), Expect = 0.072
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 221 EDRQRGTVFGLPQL-LQRKPTVPRGQQRARQGSQDPQQD-PGARRERLRHP 367
           + +Q+G  +  PQL  QR+   P+ QQ+ R   Q PQQ  P  +R + R P
Sbjct: 443 QQQQQGERYVPPQLRQQRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQRKP 493


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 31.9 bits (69), Expect = 0.024
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +2

Query: 284 PRGQQRARQGSQDPQQDPGARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQR 442
           PR QQ+ +Q  Q PQQ     + R +    HQG         ++AH  +QRQ+
Sbjct: 254 PRSQQQPQQ-QQQPQQKQQQLQRRQQQQQQHQGQRYVPPQLRQQAHQQQQRQQ 305


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 28.3 bits (60), Expect = 0.29
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 509 LGLYRHSVDDDHADALVNDSRNVSGAVRNDGRAHERHYFDRVI 381
           L L   + D    +A+ N  R +S  ++ND   H R Y+ +++
Sbjct: 64  LTLIYEASDTSFGNAVSNTKRELSSVIQNDNIDHTRSYYKQLL 106


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 375 CKPGCRSRSRRAPGSCWGSCDPCR 304
           C   C S+SRRA      +CD CR
Sbjct: 228 CTEACFSQSRRASFKRAKTCDWCR 251


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +1

Query: 664 CRPGTTTRQ*LSRSPCKMITSVLLSRSWSTDSC 762
           CRP TT      +    ++T+     SW  D+C
Sbjct: 16  CRPTTTNNDDCLQEQRTLLTTPTEGGSWHNDTC 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 782,605
Number of Sequences: 2352
Number of extensions: 16279
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)