Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_B22
(799 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X94552-1|CAA64245.1| 915|Homo sapiens glutamate receptor protein. 31 3.6
U92458-1|AAB51763.1| 915|Homo sapiens metabotropic glutamate re... 31 3.6
AF458054-1|AAM47559.1| 906|Homo sapiens metabotropic glutamate ... 31 3.6
AF458053-1|AAM47558.1| 911|Homo sapiens metabotropic glutamate ... 31 3.6
AF458052-1|AAM47557.1| 924|Homo sapiens metabotropic glutamate ... 31 3.6
AB209214-1|BAD92451.1| 656|Homo sapiens Metabotropic glutamate ... 31 3.6
BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein. 31 6.4
BC004217-1|AAH04217.1| 325|Homo sapiens neural proliferation, d... 31 6.4
AL807752-28|CAI12775.1| 325|Homo sapiens neural proliferation, ... 31 6.4
AL807752-27|CAI12774.1| 403|Homo sapiens neural proliferation, ... 31 6.4
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 31 6.4
AK074793-1|BAC11212.1| 325|Homo sapiens protein ( Homo sapiens ... 31 6.4
AF327349-1|AAL56010.1| 325|Homo sapiens NPDC-1 protein protein. 31 6.4
AF283247-1|AAF82603.1| 287|Homo sapiens NPDC-1 protein. 31 6.4
AF272357-1|AAF76225.1| 325|Homo sapiens NPDC1-like protein prot... 31 6.4
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 31 6.4
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 31 6.4
U96136-1|AAC63103.1| 1225|Homo sapiens delta-catenin protein. 30 8.4
BC021855-1|AAH21855.1| 371|Homo sapiens zinc finger and BTB dom... 30 8.4
AB013805-1|BAA36163.1| 1225|Homo sapiens neural plakophilin-rela... 30 8.4
>X94552-1|CAA64245.1| 915|Homo sapiens glutamate receptor protein.
Length = 915
Score = 31.5 bits (68), Expect = 3.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 375 CKPGCRSRSRRAPGSCWGSCDPC 307
CKPG R ++++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>U92458-1|AAB51763.1| 915|Homo sapiens metabotropic glutamate
receptor 7 protein.
Length = 915
Score = 31.5 bits (68), Expect = 3.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 375 CKPGCRSRSRRAPGSCWGSCDPC 307
CKPG R ++++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AF458054-1|AAM47559.1| 906|Homo sapiens metabotropic glutamate
receptor 7 variant 5 protein.
Length = 906
Score = 31.5 bits (68), Expect = 3.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 375 CKPGCRSRSRRAPGSCWGSCDPC 307
CKPG R ++++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AF458053-1|AAM47558.1| 911|Homo sapiens metabotropic glutamate
receptor 7 variant 4 protein.
Length = 911
Score = 31.5 bits (68), Expect = 3.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 375 CKPGCRSRSRRAPGSCWGSCDPC 307
CKPG R ++++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AF458052-1|AAM47557.1| 924|Homo sapiens metabotropic glutamate
receptor 7 variant 3 protein.
Length = 924
Score = 31.5 bits (68), Expect = 3.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 375 CKPGCRSRSRRAPGSCWGSCDPC 307
CKPG R ++++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AB209214-1|BAD92451.1| 656|Homo sapiens Metabotropic glutamate
receptor 7 variant protein.
Length = 656
Score = 31.5 bits (68), Expect = 3.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 375 CKPGCRSRSRRAPGSCWGSCDPC 307
CKPG R ++++ CW +C+PC
Sbjct: 282 CKPGQRKKTQKGTPCCW-TCEPC 303
>BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein.
Length = 719
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 366 GCRSRSRRAP-GSCWGSCDPCRARC-*PLGTVGLRCSSC 256
GC S + P GS G+CDP +C G GLRC C
Sbjct: 270 GCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDRC 308
>BC004217-1|AAH04217.1| 325|Homo sapiens neural proliferation,
differentiation and control, 1 protein.
Length = 325
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 74 PHSPSSPTPCPNVXLXSPYSVPAVH 148
P +P +PTP P+ L SP S VH
Sbjct: 145 PSTPGTPTPTPHTSLGSPVSSDPVH 169
>AL807752-28|CAI12775.1| 325|Homo sapiens neural proliferation,
differentiation and control, 1 protein.
Length = 325
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 74 PHSPSSPTPCPNVXLXSPYSVPAVH 148
P +P +PTP P+ L SP S VH
Sbjct: 145 PSTPGTPTPTPHTSLGSPVSSDPVH 169
>AL807752-27|CAI12774.1| 403|Homo sapiens neural proliferation,
differentiation and control, 1 protein.
Length = 403
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 74 PHSPSSPTPCPNVXLXSPYSVPAVH 148
P +P +PTP P+ L SP S VH
Sbjct: 223 PSTPGTPTPTPHTSLGSPVSSDPVH 247
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 366 GCRSRSRRAP-GSCWGSCDPCRARC-*PLGTVGLRCSSC 256
GC S + P GS G+CDP +C G GLRC C
Sbjct: 788 GCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDRC 826
>AK074793-1|BAC11212.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ90312 fis, clone NT2RP2001276, moderately
similar to NPDC-1 PROTEIN PRECURSOR. ).
Length = 325
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 74 PHSPSSPTPCPNVXLXSPYSVPAVH 148
P +P +PTP P+ L SP S VH
Sbjct: 145 PSTPGTPTPTPHTSLGSPVSSDPVH 169
>AF327349-1|AAL56010.1| 325|Homo sapiens NPDC-1 protein protein.
Length = 325
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 74 PHSPSSPTPCPNVXLXSPYSVPAVH 148
P +P +PTP P+ L SP S VH
Sbjct: 145 PSTPGTPTPTPHTSLGSPVSSDPVH 169
>AF283247-1|AAF82603.1| 287|Homo sapiens NPDC-1 protein.
Length = 287
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 74 PHSPSSPTPCPNVXLXSPYSVPAVH 148
P +P +PTP P+ L SP S VH
Sbjct: 107 PSTPGTPTPTPHTSLGSPVSSDPVH 131
>AF272357-1|AAF76225.1| 325|Homo sapiens NPDC1-like protein
protein.
Length = 325
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 74 PHSPSSPTPCPNVXLXSPYSVPAVH 148
P +P +PTP P+ L SP S VH
Sbjct: 145 PSTPGTPTPTPHTSLGSPVSSDPVH 169
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 366 GCRSRSRRAP-GSCWGSCDPCRARC-*PLGTVGLRCSSC 256
GC S + P GS G+CDP +C G GLRC C
Sbjct: 769 GCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDRC 807
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 366 GCRSRSRRAP-GSCWGSCDPCRARC-*PLGTVGLRCSSC 256
GC S + P GS G+CDP +C G GLRC C
Sbjct: 788 GCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDRC 826
>U96136-1|AAC63103.1| 1225|Homo sapiens delta-catenin protein.
Length = 1225
Score = 30.3 bits (65), Expect = 8.4
Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Frame = +2
Query: 62 HTLWPHSPSSPTPCPNV----XLXSPYSVPAVHRAVQAAQAPLYWSADRTCRLLGRGEDR 229
H P P P P L S + +P A AA A LY+S+ T RG
Sbjct: 212 HLAGPEPAPPPPPPPREPFAPSLGSAFHLPDAPPA--AAAAALYYSSS-TLPAPPRGGSP 268
Query: 230 QRGTVFGLPQLLQRKPTVPRGQQRARQGSQDPQQDP 337
G P LQR + P G A P+Q P
Sbjct: 269 LAAPQGGSPTKLQRGGSAPEGATYAAPRGSSPKQSP 304
>BC021855-1|AAH21855.1| 371|Homo sapiens zinc finger and BTB domain
containing 47 protein.
Length = 371
Score = 30.3 bits (65), Expect = 8.4
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 269 RKPTVPRGQQRARQGSQDPQQDPGARRERLRHPGLHQG*LGQNSDAHERAHHSEQR 436
R+ P ++ R+G + P+ PG R P G LG E+ HH Q+
Sbjct: 10 RRRGTPEPEEAGRRGGKRPKPPPGVASASARGPPATDG-LGAKVKLEEKQHHPCQK 64
>AB013805-1|BAA36163.1| 1225|Homo sapiens neural plakophilin-related
arm-repeat protein (NPRAP) protein.
Length = 1225
Score = 30.3 bits (65), Expect = 8.4
Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Frame = +2
Query: 62 HTLWPHSPSSPTPCPNV----XLXSPYSVPAVHRAVQAAQAPLYWSADRTCRLLGRGEDR 229
H P P P P L S + +P A AA A LY+S+ T RG
Sbjct: 212 HLAGPEPAPPPPPPPREPFAPSLGSAFHLPDAPPA--AAAAALYYSSS-TLPAPPRGGSP 268
Query: 230 QRGTVFGLPQLLQRKPTVPRGQQRARQGSQDPQQDP 337
G P LQR + P G A P+Q P
Sbjct: 269 LAAPQGGSPTKLQRGGSAPEGATYAAPRGSSPKQSP 304
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,617,909
Number of Sequences: 237096
Number of extensions: 2554149
Number of successful extensions: 15568
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 14678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15555
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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