Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_B22
(799 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 32 0.55
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 32 0.55
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 32 0.55
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 32 0.55
AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 30 2.2
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 29 2.9
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 29 2.9
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 29 2.9
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 29 2.9
AF025464-2|AAN84804.1| 496|Caenorhabditis elegans Prion-like-(q... 29 5.1
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 29 5.1
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 28 6.7
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 6.7
U29488-4|AAL27235.1| 401|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 8.9
AF100306-1|AAC68921.1| 423|Caenorhabditis elegans Hypothetical ... 28 8.9
AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical ... 28 8.9
AF067220-6|AAC16980.2| 303|Caenorhabditis elegans Hypothetical ... 28 8.9
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Frame = -2
Query: 381 P*CKPGCRSRSRRAPGSCWGSCDP------CRARC*PLGTVGLRCS-SCGSPN 244
P C P C+ PG C CDP C + C +GT GL CS SC N
Sbjct: 119 PDCNPPCKKGKCIEPGKC--ECDPGYGGKYCASSC-SVGTWGLGCSKSCDCEN 168
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Frame = -2
Query: 381 P*CKPGCRSRSRRAPGSCWGSCDP------CRARC*PLGTVGLRCS-SCGSPN 244
P C P C+ PG C CDP C + C +GT GL CS SC N
Sbjct: 119 PDCNPPCKKGKCIEPGKC--ECDPGYGGKYCASSC-SVGTWGLGCSKSCDCEN 168
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Frame = -2
Query: 381 P*CKPGCRSRSRRAPGSCWGSCDP------CRARC*PLGTVGLRCS-SCGSPN 244
P C P C+ PG C CDP C + C +GT GL CS SC N
Sbjct: 119 PDCNPPCKKGKCIEPGKC--ECDPGYGGKYCASSC-SVGTWGLGCSKSCDCEN 168
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Frame = -2
Query: 381 P*CKPGCRSRSRRAPGSCWGSCDP------CRARC*PLGTVGLRCS-SCGSPN 244
P C P C+ PG C CDP C + C +GT GL CS SC N
Sbjct: 119 PDCNPPCKKGKCIEPGKC--ECDPGYGGKYCASSC-SVGTWGLGCSKSCDCEN 168
>AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical
protein Y110A2AR.1 protein.
Length = 251
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 141 PYIGQYKLLKLPFTGALIEHVDYW---GEGRIVNGGLYSGFRNCY 266
P IG +K+LK P LIE + YW G IV+ L + + +C+
Sbjct: 17 PVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCF 61
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +2
Query: 125 PYSVPAVHRAVQAAQAPLYWSADRTCRLLGRGEDRQRGTVFGLPQLLQRKPTVPRGQQRA 304
P P+ +V A Y SA + ++RG G Q Q +P+ QQ+
Sbjct: 100 PQQPPSATTSVSGAAGAPYQSASGGNKEFMMQHQQRRGNQSGQQQ--QNQPSQQNNQQQQ 157
Query: 305 RQGS--QDPQQDPGARRERLRHPGLHQG*LGQNSDAHERAHHSEQ 433
QG+ Q PQQ ++ +HQ ++ HH Q
Sbjct: 158 NQGARQQHPQQMQQQQQSNQSAHFMHQQLQAVQQQQAQQMHHRLQ 202
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 643 WICCSSTCRPGTTTRQ-*LSRSPC 711
W CS++C PGT RQ +R PC
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPC 845
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 562 PTTSCPLTYRSRQ*WTRTWLSSTSNFLWICCSSTCRPGTTTR 687
PT +CP+T +S + W + + LW C++TC G R
Sbjct: 687 PTDTCPITDQSSSVYRGQWGTWS---LWTSCTATCGGGYRKR 725
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 643 WICCSSTCRPGTTTRQ-*LSRSPC 711
W CS++C PGT RQ +R PC
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPC 845
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 562 PTTSCPLTYRSRQ*WTRTWLSSTSNFLWICCSSTCRPGTTTR 687
PT +CP+T +S + W + + LW C++TC G R
Sbjct: 687 PTDTCPITDQSSSVYRGQWGTWS---LWTSCTATCGGGYRKR 725
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 643 WICCSSTCRPGTTTRQ-*LSRSPC 711
W CS++C PGT RQ +R PC
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPC 845
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 562 PTTSCPLTYRSRQ*WTRTWLSSTSNFLWICCSSTCRPGTTTR 687
PT +CP+T +S + W + + LW C++TC G R
Sbjct: 687 PTDTCPITDQSSSVYRGQWGTWS---LWTSCTATCGGGYRKR 725
>AF025464-2|AAN84804.1| 496|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform a protein.
Length = 496
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +2
Query: 224 DRQRGTVFGLPQLLQRKPTVPRGQQRARQGSQDPQQDPGARRERLRHPGLHQG*LGQNSD 403
++QR +P+ Q+ + QQ Q SQ+P Q P ++ + + P L Q
Sbjct: 185 EQQRRAQTQMPRHQQQYQAPQQQQQNYHQNSQNPYQQPNYQQNQYQ-PQLQQFQQNPRQQ 243
Query: 404 AHERAHHSEQRQRHYE 451
H ++ + Q++Y+
Sbjct: 244 QHVYSNPQQGYQQNYQ 259
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +2
Query: 224 DRQRGTVFGLPQLLQRKPTVPRGQQRARQGSQDPQQDPGARRERLRHPGLHQG*LGQNSD 403
++QR +P+ Q+ + QQ Q SQ+P Q P ++ + + P L Q
Sbjct: 207 EQQRRAQTQMPRHQQQYQAPQQQQQNYHQNSQNPYQQPNYQQNQYQ-PQLQQFQQNPRQQ 265
Query: 404 AHERAHHSEQRQRHYE 451
H ++ + Q++Y+
Sbjct: 266 QHVYSNPQQGYQQNYQ 281
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 266 QRKPTVPRGQQRARQGSQDPQQDPGARRERLRHPGLHQG 382
+R + + +ARQ Q QQ P ++R+ PG+ QG
Sbjct: 537 RRSESAATQRTKARQQHQHQQQQPQQPQQRIAAPGVPQG 575
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 302 ARQGSQDPQQDPGARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHYE 451
A+ Q Q PGA HP +H L Q+ ++ HH E H++
Sbjct: 1150 AQMMMQQQHQHPGAGGHLQLHPQMHMQMLPQHH--QQQQHHEEMMMMHHQ 1197
>U29488-4|AAL27235.1| 401|Caenorhabditis elegans Hypothetical
protein C56C10.7a protein.
Length = 401
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -3
Query: 458 NDSRNVSGAVRNDGRAHERHYFDRVILDVSPGVAVVLVAHRDPVGDLATLVGP 300
N +++V + + ++ + ++V LD S V +AH D GD+ L+ P
Sbjct: 185 NANQDVYLEAQIENTSNANMFLEKVELDPSQHYNVTSIAHEDEFGDVGKLLKP 237
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +2
Query: 338 GARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHY 448
GA E H G H G + H HHS+ ++ +
Sbjct: 690 GAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQH 726
>AF100306-1|AAC68921.1| 423|Caenorhabditis elegans Hypothetical
protein T24C4.2 protein.
Length = 423
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 71 WPHSPSSPTPCPNVXLXSPYSV-PAVHRAVQAAQAP 175
WP S PTP P +P V PA+ +V +AP
Sbjct: 308 WPASSLVPTPAPPFLTPTPSQVSPALSSSVDENEAP 343
>AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical
protein ZK1055.5 protein.
Length = 369
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 366 RAYIKDDSVKIVTLMSAPIIPNSARDITRIVNERVGMVVIYGM 494
RAYI D + + I+ ARD+ R+V++ G+ + Y M
Sbjct: 134 RAYIPDGEQRDYLMNKYNIVTWHARDVLRLVDDMSGISMHYAM 176
>AF067220-6|AAC16980.2| 303|Caenorhabditis elegans Hypothetical
protein C33E10.8 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 603 MDSHVAFLNKQLLMDLLFKYVS--TGDYNKAVTITKSLQDDNVGFVIKELV 749
MD+H +K+L D LFK ++ K++TIT+S D+ + +EL+
Sbjct: 89 MDNHEVVFDKRLTADQLFKKLAPFLRKLPKSITITES--SDDCFYFFRELI 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,811,439
Number of Sequences: 27780
Number of extensions: 357609
Number of successful extensions: 1174
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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