Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_B17
         (301 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99288-6|CAB16549.2|  286|Caenorhabditis elegans Hypothetical pr...    27   3.3  
U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z68227-7|CAA92520.1|  305|Caenorhabditis elegans Hypothetical pr...    26   5.8  
U40422-5|AAA81448.2|  494|Caenorhabditis elegans Hypothetical pr...    25   7.6  

>Z99288-6|CAB16549.2|  286|Caenorhabditis elegans Hypothetical
           protein ZK262.7 protein.
          Length = 286

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 173 NGYDYPLFFLFFN-ILYCFY 229
           NGY   LFF+F N ++ CFY
Sbjct: 149 NGYFLTLFFIFVNTLISCFY 168


>U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical protein
            C25F6.3 protein.
          Length = 1059

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 16/69 (23%), Positives = 33/69 (47%)
 Frame = -1

Query: 211  IEKQKKKRIIITIYHTTLPYFISYNKKKN*MXCIMILKYIXXPTASFRXLVR*HTVMTDV 32
            IEK +K + I+      +P+F  Y  ++  +  I + +     T ++    R  T ++ V
Sbjct: 870  IEKHQKGKPILLQGQKKMPFFGKYRDEREKLEAIKLSESNLLDTENYHFASRPDTQVSRV 929

Query: 31   THVQNKIGR 5
              V++ IG+
Sbjct: 930  PTVEDVIGK 938


>Z68227-7|CAA92520.1|  305|Caenorhabditis elegans Hypothetical
           protein F49C12.9 protein.
          Length = 305

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 250 KYLLFKIIKTI*NIEKQKKKRIIITIYHTTLPY 152
           + +L   +KT  +IE+++K RI I +   T PY
Sbjct: 70  RVVLLPPLKTNNHIEEEQKNRISIALKECTAPY 102


>U40422-5|AAA81448.2|  494|Caenorhabditis elegans Hypothetical
           protein T24D8.1 protein.
          Length = 494

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 140 VAYKIWQRCMVNGYDYPLFFLFFNILY-CFY 229
           VA +I +RC +    +P+ FL FN+ Y  FY
Sbjct: 463 VAQRIDERCRIV---FPMIFLLFNVAYWSFY 490


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,541,186
Number of Sequences: 27780
Number of extensions: 68918
Number of successful extensions: 153
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)