Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_B13
(863 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009977-1|AAQ22446.1| 1287|Drosophila melanogaster RE56428p pro... 136 4e-32
AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein... 136 4e-32
AE014134-1780|AAF52874.2| 1287|Drosophila melanogaster CG5722-PA... 136 4e-32
AE014298-3064|AAF50873.1| 1223|Drosophila melanogaster CG12092-P... 94 2e-19
BT003621-1|AAO39624.1| 767|Drosophila melanogaster GH04473p pro... 31 2.7
AE013599-2026|AAF58158.2| 767|Drosophila melanogaster CG33466-P... 31 2.7
AF454393-1|AAL51006.1| 705|Drosophila melanogaster follistatin ... 30 4.7
BT021388-1|AAX33536.1| 843|Drosophila melanogaster LD32875p pro... 29 8.3
AY075446-1|AAL68259.1| 861|Drosophila melanogaster RE06111p pro... 29 8.3
>BT009977-1|AAQ22446.1| 1287|Drosophila melanogaster RE56428p
protein.
Length = 1287
Score = 136 bits (329), Expect = 4e-32
Identities = 59/180 (32%), Positives = 103/180 (57%), Gaps = 3/180 (1%)
Frame = +1
Query: 301 CIWYGVCANSTEHKMVNCFYDGPAKPIEEKAMKIIEQYCPEIAKGGYS--CCNYEQLNQL 474
C+WYGVC + NC Y+G AK + ++++++ C + + + CC+ Q+ L
Sbjct: 33 CVWYGVCNTNDFSHSQNCPYNGTAKEMATDGLELLKKRCGFLLENSENKFCCDKNQVELL 92
Query: 475 KVNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQFNGTHRRISEIDYYL 654
N+ LA N+L RCP+C +N ++ IC C+ Q++++ V T++ IS +D ++
Sbjct: 93 NKNVELAGNILDRCPSCMENLVRHICQFTCSPKQAEFMHVVATQKNKKGDEYISSVDLHI 152
Query: 655 SKTFMDGIYNSCSEVKLTSTNERSIKVMCGQW-GDACSAQRWFDNMGDASNYQVPFXINY 831
S +++ Y SCS+V + T + + +MCG + C+ +WF+ MGDA+N VPF I Y
Sbjct: 153 STEYINKTYKSCSQVSVPQTGQLAFDLMCGAYSASRCNPTKWFNFMGDATNPYVPFQITY 212
>AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein
protein.
Length = 1287
Score = 136 bits (329), Expect = 4e-32
Identities = 59/180 (32%), Positives = 103/180 (57%), Gaps = 3/180 (1%)
Frame = +1
Query: 301 CIWYGVCANSTEHKMVNCFYDGPAKPIEEKAMKIIEQYCPEIAKGGYS--CCNYEQLNQL 474
C+WYGVC + NC Y+G AK + ++++++ C + + + CC+ Q+ L
Sbjct: 33 CVWYGVCNTNDFSHSQNCPYNGTAKEMATDGLELLKKRCGFLLENSENKFCCDKNQVELL 92
Query: 475 KVNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQFNGTHRRISEIDYYL 654
N+ LA N+L RCP+C +N ++ IC C+ Q++++ V T++ IS +D ++
Sbjct: 93 NKNVELAGNILDRCPSCMENLVRHICQFTCSPKQAEFMHVVATQKNKKGDEYISSVDLHI 152
Query: 655 SKTFMDGIYNSCSEVKLTSTNERSIKVMCGQW-GDACSAQRWFDNMGDASNYQVPFXINY 831
S +++ Y SCS+V + T + + +MCG + C+ +WF+ MGDA+N VPF I Y
Sbjct: 153 STEYINKTYKSCSQVSVPQTGQLAFDLMCGAYSASRCNPTKWFNFMGDATNPYVPFQITY 212
>AE014134-1780|AAF52874.2| 1287|Drosophila melanogaster CG5722-PA
protein.
Length = 1287
Score = 136 bits (329), Expect = 4e-32
Identities = 59/180 (32%), Positives = 103/180 (57%), Gaps = 3/180 (1%)
Frame = +1
Query: 301 CIWYGVCANSTEHKMVNCFYDGPAKPIEEKAMKIIEQYCPEIAKGGYS--CCNYEQLNQL 474
C+WYGVC + NC Y+G AK + ++++++ C + + + CC+ Q+ L
Sbjct: 33 CVWYGVCNTNDFSHSQNCPYNGTAKEMATDGLELLKKRCGFLLENSENKFCCDKNQVELL 92
Query: 475 KVNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQFNGTHRRISEIDYYL 654
N+ LA N+L RCP+C +N ++ IC C+ Q++++ V T++ IS +D ++
Sbjct: 93 NKNVELAGNILDRCPSCMENLVRHICQFTCSPKQAEFMHVVATQKNKKGDEYISSVDLHI 152
Query: 655 SKTFMDGIYNSCSEVKLTSTNERSIKVMCGQW-GDACSAQRWFDNMGDASNYQVPFXINY 831
S +++ Y SCS+V + T + + +MCG + C+ +WF+ MGDA+N VPF I Y
Sbjct: 153 STEYINKTYKSCSQVSVPQTGQLAFDLMCGAYSASRCNPTKWFNFMGDATNPYVPFQITY 212
>AE014298-3064|AAF50873.1| 1223|Drosophila melanogaster CG12092-PA
protein.
Length = 1223
Score = 94.3 bits (224), Expect = 2e-19
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 11/175 (6%)
Frame = +1
Query: 367 PAKPIEEKAMK-IIEQYCPEIAKG--GYS-------CCNYEQLNQLKVNIALAENLLGRC 516
PA+P+ + I + CP + K G S CC+ Q+ ++ ++ A+ + RC
Sbjct: 14 PARPLNSPTSEAIFAKRCPMLYKEYKGESGEDELSLCCDAAQIETMESGLSQADGVFSRC 73
Query: 517 PTCFQNFLKPICGMACAVDQSKYLKPVKTEQFNGTHRRISEIDYYLSKTFMDGIYNSCSE 696
PTC +N +C M CA + + +L G + IDY L+ + IYNSC
Sbjct: 74 PTCTRNMALTVCAMTCAKNHTLFLTAYNDTNDAGVD-YVKYIDYRLTDDTVSKIYNSCIG 132
Query: 697 VKLTSTNERSIKVMCGQW-GDACSAQRWFDNMGDASNYQVPFXINYKATDVPVDG 858
++ T T ++ + CG + C+ +RW++ MGD S VPF INYK ++ +G
Sbjct: 133 IQHTQTGRPAMDLGCGSYNAKTCNYRRWYEFMGDVSGDYVPFQINYKWSEDAEEG 187
>BT003621-1|AAO39624.1| 767|Drosophila melanogaster GH04473p
protein.
Length = 767
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 457 EQLNQLKVNIALAENLLGRCPTCFQNFL-KPICGMACAVDQSKYLKPVKTEQFNGTHRRI 633
+ L L + + L L TC+Q L CG + D S+ ++ F+ T R +
Sbjct: 192 QPLMALLIGLLLLNFRLAAAGTCWQTHLGSGKCGQVFSTDISRSECCGSSQSFSYTDREL 251
Query: 634 SEIDYYLSKTFMDGIYNS-CSE 696
S ++Y+ + G+ S C E
Sbjct: 252 SSVEYFFATAIGGGVECSPCME 273
>AE013599-2026|AAF58158.2| 767|Drosophila melanogaster CG33466-PA
protein.
Length = 767
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 457 EQLNQLKVNIALAENLLGRCPTCFQNFL-KPICGMACAVDQSKYLKPVKTEQFNGTHRRI 633
+ L L + + L L TC+Q L CG + D S+ ++ F+ T R +
Sbjct: 192 QPLMALLIGLLLLNFRLAAAGTCWQTHLGSGKCGQVFSTDISRSECCGSSQSFSYTDREL 251
Query: 634 SEIDYYLSKTFMDGIYNS-CSE 696
S ++Y+ + G+ S C E
Sbjct: 252 SSVEYFFATAIGGGVECSPCME 273
>AF454393-1|AAL51006.1| 705|Drosophila melanogaster follistatin
protein.
Length = 705
Score = 29.9 bits (64), Expect = 4.7
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 457 EQLNQLKVNIALAENLLGRCPTCFQNFL-KPICGMACAVDQSKYLKPVKTEQFNGTHRRI 633
+ L L + + L L TC+Q L CG + D S+ ++ F+ T R +
Sbjct: 130 QPLMALLIGLLLLNFRLTAAGTCWQTHLGSGKCGQVFSTDISRSECCGSSQSFSYTDREL 189
Query: 634 SEIDYYLSKTFMDGIYNS-CSE 696
S ++Y+ + G+ S C E
Sbjct: 190 SSVEYFFATAIGGGVECSPCME 211
>BT021388-1|AAX33536.1| 843|Drosophila melanogaster LD32875p
protein.
Length = 843
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 349 NCFYDGPAKPIEEKAMKIIEQYCPEIAKGGYSCCNYEQLNQLKVNIALAENLLGRCP 519
NC D P+KP + A+ II Y P+ QL +NI +N+ G P
Sbjct: 34 NCLLDLPSKPSSDTALHIICNYGPDNTPEIMEVVKKILQRQLNINI---QNIKGETP 87
>AY075446-1|AAL68259.1| 861|Drosophila melanogaster RE06111p
protein.
Length = 861
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 349 NCFYDGPAKPIEEKAMKIIEQYCPEIAKGGYSCCNYEQLNQLKVNIALAENLLGRCP 519
NC D P+KP + A+ II Y P+ QL +NI +N+ G P
Sbjct: 52 NCLLDLPSKPSSDTALHIICNYGPDNTPEIMEVVKKILQRQLNINI---QNIKGETP 105
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,190,751
Number of Sequences: 53049
Number of extensions: 726336
Number of successful extensions: 2309
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2301
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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