Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_B09
(927 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 179 3e-45
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 171 5e-43
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 163 2e-40
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 145 2e-39
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 54 1e-07
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 33 0.43
02_05_0250 + 27153048-27154453,27154546-27154885 31 0.98
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 1.7
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 30 2.3
08_02_0610 + 19307537-19308011,19308187-19310846 30 3.0
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 29 4.0
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 29 5.2
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 29 5.2
11_06_0437 - 23533218-23536382 29 6.9
05_01_0297 - 2314687-2316021 29 6.9
03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068 29 6.9
03_05_1012 + 29670310-29670512,29670856-29671001,29671169-296712... 28 9.2
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 179 bits (435), Expect = 3e-45
Identities = 77/136 (56%), Positives = 107/136 (78%), Gaps = 2/136 (1%)
Frame = +1
Query: 139 FPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTH 318
+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H VGIDIFNGKK EDI PS+H
Sbjct: 21 YPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSH 80
Query: 319 NMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDF-DSGKELL 492
N DVPHV R DYQL DIS+DG+++L+ ++G+ ++DL++P D L Q++ F + GK+++
Sbjct: 81 NCDVPHVDRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDDTLTNQIKNGFGEEGKDMI 140
Query: 493 CTVLKSCGEECVIAVK 540
TV+ + GEE + AVK
Sbjct: 141 LTVMSAMGEEQICAVK 156
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 171 bits (417), Expect = 5e-43
Identities = 76/139 (54%), Positives = 106/139 (76%), Gaps = 5/139 (3%)
Frame = +1
Query: 139 FPMQCSALRKNGFVMLKGRPCK----IVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDIC 306
+P Q +RKNG++++K RPCK +VE+STSKTGKHGHAK H V IDIFNGKK EDI
Sbjct: 34 YPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIV 93
Query: 307 PSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGK 483
PS+HN DVPHV R +YQL DIS+DG+++L+ ++G+ ++DL++P D L Q++T F GK
Sbjct: 94 PSSHNCDVPHVNRTEYQLIDISEDGFVSLLTESGNTKDDLRLPTDDSLLGQIKTGFGEGK 153
Query: 484 ELLCTVLKSCGEECVIAVK 540
+L+ TV+ + GEE + A+K
Sbjct: 154 DLVVTVMSAMGEEQICALK 172
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 163 bits (395), Expect = 2e-40
Identities = 77/148 (52%), Positives = 104/148 (70%), Gaps = 14/148 (9%)
Frame = +1
Query: 139 FPMQCSALRKNGFVMLKGRPCK-------------IVEMSTSKTGKHGHAKVHLVGIDIF 279
+P Q +RKNG +++K RPCK +VE+STSKTGKHGHAK H V IDIF
Sbjct: 1343 YPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVSTSKTGKHGHAKCHFVAIDIF 1402
Query: 280 NGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQ 456
NGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ ++G ++DL++P D L TQ
Sbjct: 1403 NGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLRLPSDEALLTQ 1462
Query: 457 LRTDFDSGKELLCTVLKSCGEECVIAVK 540
++ F GK+L+ TV+ + GEE + A+K
Sbjct: 1463 IKDGFAEGKDLIVTVMSAMGEEQICALK 1490
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 145 bits (351), Expect(2) = 2e-39
Identities = 64/114 (56%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Frame = +1
Query: 202 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 381
K+VE+STSKTGKHGHAK H V IDIF KK EDI PS+HN DVPHV R +YQL DIS+DG
Sbjct: 74 KVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDG 133
Query: 382 YLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 540
+++L+ +NG+ ++DL++P D +L +Q++ F GK+L+ TV+ + GEE + A+K
Sbjct: 134 FVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICALK 187
Score = 35.9 bits (79), Expect(2) = 2e-39
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 139 FPMQCSALRKNGFVMLKGRPCK 204
+P Q +RKNG++++K RPCK
Sbjct: 21 YPQQAGTIRKNGYIVIKNRPCK 42
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +1
Query: 334 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFDSGKELLCTVLK 507
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 508 SCG 516
+ G
Sbjct: 106 AMG 108
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 122 PGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPE 235
P PQPP PC PC K C + C PKP+
Sbjct: 81 PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPK 117
>02_05_0250 + 27153048-27154453,27154546-27154885
Length = 581
Score = 31.5 bits (68), Expect = 0.98
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 397 ADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTA 552
A GD DL IPD + TQ+ T+ S C V S G C AV A+ +
Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPASNS 298
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 325 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 444
D P+ RE +++ ++ D Y+T D+G L ED+K+ G+
Sbjct: 38 DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 113 PETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPESTATLKFTWLGLISSMVKS 292
P TP P PP P P ++ + P K T T+ +W L +S++KS
Sbjct: 283 PPTPTPTPPPPAMTSPPKLNLAAKPNGTSGTVTSTPTVKRRVTETV--SWDSLPTSLIKS 340
Query: 293 MKI 301
+K+
Sbjct: 341 VKV 343
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 107 EVCXFDVTHCCVLNLTTVRNDM 42
+VC FD+ CC L T+ NDM
Sbjct: 835 DVCHFDLRTCCALPPATLENDM 856
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 29.5 bits (63), Expect = 4.0
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = -1
Query: 522 LLTAGFQHGAQQFLAAVEVSTQLCAEVTIRDFEVLTQVTVVSHQGQVAIIRDISQLVVFA 343
++ AG H ++ FLA ++ T + +E +++ VL+ +T ++ V D L V
Sbjct: 1035 MVEAGTHHTSKPFLAPLKELT-IYSESSVQSMAVLSSLTSLTRLRLV----DCDNLTV-- 1087
Query: 342 LHVGYVHVVCGGTDIFILFTIEDINPNQVNFSVA 241
VG+ V+ G +++ DI+ N SVA
Sbjct: 1088 --VGFDPVMTGSLSELVIYNKPDIDDNNHRCSVA 1119
>12_01_1024 -
10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1
Query: 403 NGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 546
N D D I G GTQ D +L +VLKS + CV A KA+
Sbjct: 730 NRDTDIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKAS 777
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 433 PDGDLGTQLRTDFDSGKELLCTVLKSCGE 519
PDGDL ++R +SGKEL L G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 244 HAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 381
HA LV + I N +K DI D+ H K+E Y+L + G
Sbjct: 179 HACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGG 224
>05_01_0297 - 2314687-2316021
Length = 444
Score = 28.7 bits (61), Expect = 6.9
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 358 LTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCG 516
+ D + +G L + AD D+R + DGD G +LR F S +LL V S G
Sbjct: 91 VVDCTGEGVLFVEAD-ADVRLEELEEDGDGGGELRPPFPSMDQLLLDVEGSGG 142
>03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068
Length = 145
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 107 RVPETPGPQPPSPCNVRP-CVKTVSLC*RVVHARLLKCPHP 226
+ PE P PP C + P C C ++ +LL+ HP
Sbjct: 6 QAPENESPPPPPHCWIYPECTLVTRSCCLLLRLKLLRHGHP 46
>03_05_1012 +
29670310-29670512,29670856-29671001,29671169-29671245,
29671329-29671451,29671558-29671660,29672100-29672173,
29672249-29672329,29672411-29672563,29672780-29672881
Length = 353
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 348 FALHVGYVHVV-CGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLAW 196
F L GY+ + GT++F F + NP+ + ++ G C F+ LA+
Sbjct: 63 FYLETGYIGIEEKTGTELFYYFVESETNPDTDPLVLWLVGGPRCSAFSGLAY 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,787,289
Number of Sequences: 37544
Number of extensions: 511710
Number of successful extensions: 1650
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1638
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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