Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_B06
(633 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 178 1e-43
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 153 4e-36
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 148 1e-34
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 143 3e-33
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 139 4e-32
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 136 5e-31
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 133 4e-30
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 132 9e-30
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 130 3e-29
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 123 3e-27
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 123 3e-27
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 123 3e-27
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 122 5e-27
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 118 2e-25
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 118 2e-25
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 117 3e-25
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 116 4e-25
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 115 1e-24
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 114 1e-24
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 105 7e-22
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 103 3e-21
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 102 6e-21
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 102 6e-21
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 101 1e-20
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 96 7e-19
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 94 3e-18
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 94 3e-18
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 94 3e-18
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 94 3e-18
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 92 9e-18
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 89 6e-17
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 84 3e-15
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 83 5e-15
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 79 7e-14
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 78 2e-13
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 76 6e-13
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 75 2e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 74 2e-12
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 73 8e-12
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 73 8e-12
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 71 2e-11
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 63 5e-09
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 62 8e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 61 2e-08
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 59 8e-08
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 58 2e-07
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 56 5e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 54 3e-06
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 54 4e-06
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 52 9e-06
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 52 1e-05
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 52 1e-05
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 51 2e-05
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 49 1e-04
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 48 1e-04
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 47 3e-04
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 47 4e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 47 4e-04
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 46 6e-04
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 46 6e-04
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 46 8e-04
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 46 8e-04
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 45 0.002
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 44 0.002
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 44 0.003
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 44 0.004
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 44 0.004
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 42 0.009
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 42 0.009
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 42 0.012
UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Ya... 42 0.016
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 42 0.016
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 41 0.022
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 41 0.022
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 41 0.028
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 41 0.028
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 40 0.038
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 40 0.038
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 40 0.050
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 40 0.066
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 39 0.087
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 38 0.15
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 38 0.20
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 38 0.26
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 37 0.35
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 37 0.46
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 37 0.46
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 37 0.46
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 37 0.46
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 36 0.61
UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=... 36 0.61
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 34 2.5
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 34 2.5
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 34 2.5
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 34 3.3
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 10.0
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 178 bits (433), Expect = 1e-43
Identities = 96/185 (51%), Positives = 104/185 (56%)
Frame = +2
Query: 77 K*IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXX 256
K +YSTNHKDIGTLYF AELG PGSL GDDQIYNT VTAHA
Sbjct: 2 KWLYSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFI 61
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N LVPL+LGAPD+AFPR+NN+ F IVENGAGT
Sbjct: 62 MIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGT 121
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPLSSNIAH G SV LA F LHLA R+ N+SFDQ+PLF
Sbjct: 122 GWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLF 181
Query: 617 V*AVG 631
V AVG
Sbjct: 182 VWAVG 186
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 153 bits (370), Expect = 4e-36
Identities = 78/141 (55%), Positives = 90/141 (63%)
Frame = -1
Query: 534 DEIPAKCSGXIARXTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 355
+E PAKC+ I TD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 354 IRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXXXXXXXXVL*I*SSPINDPGFPNSAR 175
IRGNA+SGAP++ GTNQFPNPP L I S PI PG PNSAR
Sbjct: 138 IRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSAR 196
Query: 174 IKSLKDVPIIPDQIPKIKYNV 112
IKSL DVP +P PK+KYNV
Sbjct: 197 IKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 148 bits (358), Expect = 1e-34
Identities = 78/150 (52%), Positives = 87/150 (58%)
Frame = +2
Query: 182 ELGNPGSLXGDDQIYNTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 361
ELG PGSL GDDQIYNT VTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 362 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXX 541
+ F IVENGAGTG TVYPPLSSNIAH G SV LA F LHLA
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 542 XXXXXXXXXXXXRLXNISFDQLPLFV*AVG 631
R+ +SFDQ+PLF+ AVG
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVG 162
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 143 bits (347), Expect = 3e-33
Identities = 81/182 (44%), Positives = 93/182 (51%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXX 262
++STNHKDIGTLY AELG PG+L GDDQIYN VTAHA
Sbjct: 8 LFSTNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMI 67
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 442
N LVPL++GAPD+AFPR+NN+ F VE GAGTG
Sbjct: 68 FFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGW 127
Query: 443 TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV* 622
TVYPPL+ N+AH G SV LA F LHLA + IS Q PLFV
Sbjct: 128 TVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVW 187
Query: 623 AV 628
+V
Sbjct: 188 SV 189
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 139 bits (337), Expect = 4e-32
Identities = 79/181 (43%), Positives = 89/181 (49%)
Frame = +2
Query: 86 YSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXX 265
+STNHKDIGTLY AEL PG+L GDDQIYN VTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 266 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 445
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 68 FMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 446 VYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV*A 625
VYPPL+ N+AH G SV L F LHLA + IS Q PLFV A
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWA 187
Query: 626 V 628
V
Sbjct: 188 V 188
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 136 bits (328), Expect = 5e-31
Identities = 77/181 (42%), Positives = 89/181 (49%)
Frame = +2
Query: 86 YSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXX 265
+STNHKDIGTLY AEL PG+L GDDQIYN VTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 266 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 445
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 68 FMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 446 VYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV*A 625
VYPPL+ N+AH G SV L F LHLA + I+ Q PLFV +
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWS 187
Query: 626 V 628
V
Sbjct: 188 V 188
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 133 bits (321), Expect = 4e-30
Identities = 74/182 (40%), Positives = 90/182 (49%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXX 262
++STNHKDIGTLY AELG PG+L G+D IYN VTAHA
Sbjct: 7 LFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMI 66
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 442
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG
Sbjct: 67 FFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGW 126
Query: 443 TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV* 622
TVYPPL+ N +H G SV L F LHLA + ++ Q PLFV
Sbjct: 127 TVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVW 186
Query: 623 AV 628
+V
Sbjct: 187 SV 188
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 132 bits (318), Expect = 9e-30
Identities = 71/181 (39%), Positives = 88/181 (48%)
Frame = +2
Query: 86 YSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXX 265
+S NHKDIG+LY EL +PGS+ GDD +YN VTAHA
Sbjct: 9 FSCNHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIF 68
Query: 266 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 445
N VPL++GAPD+AFPR+NNI F +VE GAGTG T
Sbjct: 69 FLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWT 128
Query: 446 VYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV*A 625
VYPPL+S AH G SV +A F LHLA R ++ ++PLFV +
Sbjct: 129 VYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWS 188
Query: 626 V 628
V
Sbjct: 189 V 189
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 130 bits (314), Expect = 3e-29
Identities = 74/177 (41%), Positives = 85/177 (48%)
Frame = +2
Query: 98 HKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXXXXX 277
HKDIGTLY AEL PG+L GDDQIYN VTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 278 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 457
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 458 LSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV*AV 628
L+ N+AH G SV L F LHLA + IS Q PLFV AV
Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAV 177
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 123 bits (297), Expect = 3e-27
Identities = 72/184 (39%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
+YSTN KDIGTLY EL PG L GD Q+YN +TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPLS +H G SV LA F LHL+ R ++ +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 617 V*AV 628
V A+
Sbjct: 185 VWAI 188
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 123 bits (297), Expect = 3e-27
Identities = 72/184 (39%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
+YSTN KDIGTLY EL PG L GD Q+YN +TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPLS +H G SV LA F LHL+ R ++ +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 617 V*AV 628
V A+
Sbjct: 185 VWAI 188
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 123 bits (297), Expect = 3e-27
Identities = 72/184 (39%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
+YSTN KDIGTLY EL PG L GD Q+YN +TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPLS +H G SV LA F LHL+ R ++ +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 617 V*AV 628
V A+
Sbjct: 185 VWAI 188
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 122 bits (295), Expect = 5e-27
Identities = 69/184 (37%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
++STNHKDIGTLYF EL PG L G+ Q+YN +TAHA
Sbjct: 8 LFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFL 67
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N VP+++GAPD+AFPR+NNI F +VE G+GT
Sbjct: 68 MIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGT 127
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPLS +H G +V LA F LHL+ R ++ +LPLF
Sbjct: 128 GWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLF 187
Query: 617 V*AV 628
V +V
Sbjct: 188 VWSV 191
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 118 bits (283), Expect = 2e-25
Identities = 70/181 (38%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
+YSTN KDI LYF EL PGS L G+ Q++N V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N L+PL++GA D AFPRINNI F +VE+GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGT 125
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPLSS AH G SV LA F LHL R ++ +LPLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 617 V 619
V
Sbjct: 186 V 186
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 118 bits (283), Expect = 2e-25
Identities = 70/181 (38%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
+YSTN KDI LYF EL PGS L G+ Q++N V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N L+PL++GA D AFPRINNI F +VE+GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGT 125
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPLSS AH G SV LA F LHL R ++ +LPLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 617 V 619
V
Sbjct: 186 V 186
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 117 bits (281), Expect = 3e-25
Identities = 65/149 (43%), Positives = 76/149 (51%)
Frame = +2
Query: 182 ELGNPGSLXGDDQIYNTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 361
ELG PGS G+DQ+YN VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 362 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXX 541
+ F VE+GAGTG TVYPPLS N AH G SV LA F LHLA
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 542 XXXXXXXXXXXXRLXNISFDQLPLFV*AV 628
R + + + LFV +V
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSV 171
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 116 bits (280), Expect = 4e-25
Identities = 68/181 (37%), Positives = 85/181 (46%), Gaps = 2/181 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
I+STNHKDIGTLY EL P + L G+ QIYN +TAHA
Sbjct: 13 IFSTNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFL 72
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N LVP+++G+PD+AFPR+NNI F +VE G GT
Sbjct: 73 MIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGT 132
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPLSS +H G +V LA F LH++ R S ++PLF
Sbjct: 133 GWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLF 192
Query: 617 V 619
V
Sbjct: 193 V 193
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 115 bits (276), Expect = 1e-24
Identities = 67/184 (36%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
+YSTN KDI +YF EL PGS L G+ Q++N V HA
Sbjct: 6 LYSTNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N ++PL++GA D++FPRIN+I F +VE+GAGT
Sbjct: 66 MIFFLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGT 125
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPLSS AH G SV LA F LHL R +S ++PLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLF 185
Query: 617 V*AV 628
V A+
Sbjct: 186 VWAI 189
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 114 bits (275), Expect = 1e-24
Identities = 67/184 (36%), Positives = 84/184 (45%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
+YSTN KDI LYF EL PG L G++Q++N V HA
Sbjct: 6 LYSTNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAIL 65
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N ++PL++GA D AFPRINNI F +VE+GAGT
Sbjct: 66 MIFFMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGT 125
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPL+S AH G SV LA F LH+ R ++ +LPLF
Sbjct: 126 GWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 617 V*AV 628
V A+
Sbjct: 186 VWAI 189
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 105 bits (253), Expect = 7e-22
Identities = 64/184 (34%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
++STN KDI LYF EL N GS L G+ Q +N +TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N L+PL+LGA D+AF R+NNI F +VE GAGT
Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGT 130
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVY PL+ +H G +V LA F LHL+ R + ++ +PLF
Sbjct: 131 GWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLF 190
Query: 617 V*AV 628
AV
Sbjct: 191 AWAV 194
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 103 bits (248), Expect = 3e-21
Identities = 56/145 (38%), Positives = 71/145 (48%)
Frame = +2
Query: 182 ELGNPGSLXGDDQIYNTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 361
ELG PGSL G+DQIYN+ VT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 362 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXX 541
+ F + G GTG TVYPPLS + H G SV L F LHLA
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 542 XXXXXXXXXXXXRLXNISFDQLPLF 616
R + D++ LF
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLF 168
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 102 bits (245), Expect = 6e-21
Identities = 63/181 (34%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPG-SLXGDDQIYNTXVTAHAXXXXX 265
STN KDIGTLY EL PG ++Q+YN+ +TAHA
Sbjct: 37 STNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIF 96
Query: 266 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 445
N L+PL++G PD+AFPR+NNI F I+E G GTG T
Sbjct: 97 FMVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWT 156
Query: 446 V----YPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPL 613
+ YPPLS +H G SV LA F LHL+ R I +L L
Sbjct: 157 LLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLAL 216
Query: 614 F 616
F
Sbjct: 217 F 217
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 102 bits (245), Expect = 6e-21
Identities = 63/181 (34%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPG-SLXGDDQIYNTXVTAHAXXXXX 265
S+N KDIG LY EL PG D+Q+YN+ +TAHA
Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIF 68
Query: 266 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 445
N L+PL LG PD+ FPR+NNI + +ENG GTG T
Sbjct: 69 FMVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWT 128
Query: 446 VYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV*A 625
+YPPLS +H G SV LA F LHL+ R I +L LF A
Sbjct: 129 LYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWA 188
Query: 626 V 628
V
Sbjct: 189 V 189
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 101 bits (242), Expect = 1e-20
Identities = 57/127 (44%), Positives = 65/127 (51%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXX 262
+ STNHKD GTL AELG PG+L GDDQ N VTAHA
Sbjct: 8 LXSTNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMI 67
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 442
N LVPL++GAPD+AFPR+NN+ F VE GAGTG
Sbjct: 68 FXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGW 127
Query: 443 TVYPPLS 463
TVYPPL+
Sbjct: 128 TVYPPLA 134
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 95.9 bits (228), Expect = 7e-19
Identities = 56/181 (30%), Positives = 75/181 (41%), Gaps = 1/181 (0%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPG-SLXGDDQIYNTXVTAHAXXXXX 265
S+N KDI LY EL PG D+Q+YN+ +T+H
Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIF 94
Query: 266 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 445
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T
Sbjct: 95 FMVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWT 154
Query: 446 VYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV*A 625
+YPPLS +H V L F LHL+ R I +L LF A
Sbjct: 155 LYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWA 214
Query: 626 V 628
V
Sbjct: 215 V 215
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 93.9 bits (223), Expect = 3e-18
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELG--NPGSLXGDDQIYNTXVTAHAXX 256
++STN ++I LY EL NP L + Q++N +TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G T+YPPL+S +H G S+ +A F LHL+ R + + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 617 V*AV 628
V +V
Sbjct: 203 VWSV 206
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 93.9 bits (223), Expect = 3e-18
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELG--NPGSLXGDDQIYNTXVTAHAXX 256
++STN ++I LY EL NP L + Q++N +TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G T+YPPL+S +H G S+ +A F LHL+ R + + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 617 V*AV 628
V +V
Sbjct: 203 VWSV 206
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 93.9 bits (223), Expect = 3e-18
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELG--NPGSLXGDDQIYNTXVTAHAXX 256
++STN ++I LY EL NP L + Q++N +TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G T+YPPL+S +H G S+ +A F LHL+ R + + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 617 V*AV 628
V +V
Sbjct: 203 VWSV 206
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 93.9 bits (223), Expect = 3e-18
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELG--NPGSLXGDDQIYNTXVTAHAXX 256
++STN ++I LY EL NP L + Q++N +TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G T+YPPL+S +H G S+ +A F LHL+ R + + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 617 V*AV 628
V +V
Sbjct: 203 VWSV 206
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 92.3 bits (219), Expect = 9e-18
Identities = 59/184 (32%), Positives = 72/184 (39%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
I++TNHK IG LY EL PG L G+ YN T H
Sbjct: 9 IFTTNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVL 68
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N VP+++GAPD++FPR+NN F E G GT
Sbjct: 69 MLFVVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGT 128
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G TVYPPLSS +H G SV L F HL + + LPLF
Sbjct: 129 GWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLF 188
Query: 617 V*AV 628
V +V
Sbjct: 189 VWSV 192
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 89.4 bits (212), Expect = 6e-17
Identities = 53/132 (40%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
+YSTN KDIGTLY EL PG L GD Q+YN +TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 437 G*TVYPPLSSNI 472
G TV LS I
Sbjct: 125 GWTVKCKLSQII 136
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 83.8 bits (198), Expect = 3e-15
Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
++STNHKDIGTLY EL PG+ L G+ Q+YN +TAHA
Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFL 68
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N VP+++G+PD+AFPR+NNI F +VE G G+
Sbjct: 69 MIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGS 128
Query: 437 G*TV 448
G TV
Sbjct: 129 GWTV 132
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 83.0 bits (196), Expect = 5e-15
Identities = 64/200 (32%), Positives = 81/200 (40%), Gaps = 20/200 (10%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPG-------SLXGD------DQIY- 226
STNHKDIGTLY AEL PG + D DQ Y
Sbjct: 33 STNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYH 92
Query: 227 --NTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 400
N +TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 401 XXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXX 568
V NGAGTG TVY PLS++ G +V +A LH+A
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 569 XXXRLXNISFDQLPLFV*AV 628
R ++ ++PLFV +V
Sbjct: 212 LNMRAPGMTLHKMPLFVWSV 231
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 79.4 bits (187), Expect = 7e-14
Identities = 51/137 (37%), Positives = 58/137 (42%)
Frame = +2
Query: 113 TLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXXXXXXXXXX 292
TLYF ELG PGSL DDQ+YN VTAH
Sbjct: 1 TLYFIFGIWSGLLGTSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIG 60
Query: 293 XXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 472
N LVPL+LGAPD+AFPR+NN+ F + G + PL
Sbjct: 61 GFGNWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVT 118
Query: 473 AHRGRSVXLAXFPLHLA 523
G SV LA FPLHLA
Sbjct: 119 ISAGPSVDLAIFPLHLA 135
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 77.8 bits (183), Expect = 2e-13
Identities = 48/132 (36%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
++STN KDI LYF EL N GS L G+ Q +N +TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N L+PL+LGA D+AF R+NNI F +VE GAGT
Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGT 130
Query: 437 G*TVYPPLSSNI 472
G TV SS +
Sbjct: 131 GWTVKKICSSKM 142
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 76.2 bits (179), Expect = 6e-13
Identities = 47/104 (45%), Positives = 54/104 (51%)
Frame = +2
Query: 317 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVX 496
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SV
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 497 LAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV*AV 628
LA F LH+A R ++ ++PLFV AV
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAV 107
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/64 (56%), Positives = 42/64 (65%)
Frame = +2
Query: 317 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVX 496
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SV
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 497 LAXF 508
LA +
Sbjct: 61 LAIY 64
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 74.1 bits (174), Expect = 2e-12
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Frame = +2
Query: 179 AELGNPGSLXG--DDQIYNTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 352
A LG L G D ++N +T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 353 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXX 532
+NN+ + +++ GAG G T YPP+S+ R+V A F +H++
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 533 XXXXXXXXXXXXXXXRLXNISFDQLPLFV*AV 628
R ++ ++PLF +V
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSV 294
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 72.5 bits (170), Expect = 8e-12
Identities = 41/145 (28%), Positives = 60/145 (41%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
S NHKDIGT+Y EL +PG +Y++ +T HA
Sbjct: 11 SVNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFF 70
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 448
N +PL++ D++ PR+NN+ + G G G T+
Sbjct: 71 FVMPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTM 130
Query: 449 YPPLSSNIAHRGRSVXLAXFPLHLA 523
YPPLS++ G + LA F LH+A
Sbjct: 131 YPPLSNSEFMDGLPIDLAVFSLHMA 155
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 72.5 bits (170), Expect = 8e-12
Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
+YSTN KDI LYF EL PG+ L G+ Q++N V HA
Sbjct: 6 LYSTNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVL 65
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N L+PL++GA D++F R+NNI F +VE+GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGT 125
Query: 437 G*TV 448
G TV
Sbjct: 126 GWTV 129
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 71.3 bits (167), Expect = 2e-11
Identities = 47/181 (25%), Positives = 66/181 (36%), Gaps = 2/181 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHAXX 256
I + NHK IGT Y EL +PG G Q+YN+ +T H
Sbjct: 16 INTVNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVL 75
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 436
N ++PL+LGAP++AFPR+N + F + G G+
Sbjct: 76 MIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGS 135
Query: 437 G*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
T YPPLS S+ LH R ++ DQ+ +F
Sbjct: 136 SWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMF 194
Query: 617 V 619
V
Sbjct: 195 V 195
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 63.3 bits (147), Expect = 5e-09
Identities = 40/146 (27%), Positives = 53/146 (36%), Gaps = 2/146 (1%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELG--NPGSLXGDDQIYNTXVTAHAXXXX 262
S +HK IG Y EL G L GD Q YN +T+H
Sbjct: 10 SVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMV 69
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 442
N +P++ G PD+ FPR+NN+ F + E G G G
Sbjct: 70 FAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGW 129
Query: 443 TVYPPLSSNIAHRGRSVXLAXFPLHL 520
T+YP L H + F +HL
Sbjct: 130 TLYPTLICIDFHSSLACDFVMFAVHL 155
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 62.5 bits (145), Expect = 8e-09
Identities = 57/143 (39%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Frame = +2
Query: 98 HKDIGTLYFXXXX-XXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXXXX 274
HKD GTL F L G + G QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 275 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 454
L PL +GAP +A PR+ N+ F + G G VYP
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120
Query: 455 PLSSNIAHRGRSVXLAXFPLHLA 523
P SS +AH +V L F LHLA
Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHLA 143
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 60.9 bits (141), Expect = 2e-08
Identities = 45/179 (25%), Positives = 64/179 (35%), Gaps = 1/179 (0%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXX 262
I +T+HKDIG LY +L P S Y VT H
Sbjct: 16 ITTTDHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIML 75
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG 439
N +VPL +GA D+AFPR+N + + E+GA G
Sbjct: 76 LWFASPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVG 134
Query: 440 *TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
T+Y PL++ I G + LA + L R I + ++P+F
Sbjct: 135 WTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMF 193
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 59.3 bits (137), Expect = 8e-08
Identities = 53/184 (28%), Positives = 70/184 (38%), Gaps = 8/184 (4%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+ +HKDIG LY EL +PG + YN+ +T+H
Sbjct: 91 TVDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFL 150
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXX--XXXXXXXXXXXIVE-NGAGTG 439
N L+PL++GA D+AFPRIN I F I E A TG
Sbjct: 151 FATPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTG 209
Query: 440 *TVYPPLS-----SNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQ 604
T+Y PLS N A+ G V L LHL+ R N+S+
Sbjct: 210 WTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWAN 267
Query: 605 LPLF 616
L +F
Sbjct: 268 LDIF 271
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 58.0 bits (134), Expect = 2e-07
Identities = 43/179 (24%), Positives = 64/179 (35%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXX 262
+ + +HK IG ++ EL PG D YN T H
Sbjct: 30 LLTQDHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMI 89
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 442
N L+P+++GA D+AFP++N + F +V+ GA TG
Sbjct: 90 FLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGW 148
Query: 443 TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV 619
T Y P S+ + V L F L + R + + +LPLFV
Sbjct: 149 TFYTPYSTTTITKVVPVLLGAFILGFS---SILTGLNFIVTTHTMRAPGMGWTRLPLFV 204
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 56.4 bits (130), Expect = 5e-07
Identities = 43/147 (29%), Positives = 54/147 (36%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXX 262
I S NH D+ LYF +L P L D +YN VT H
Sbjct: 4 IMSVNHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMV 61
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 442
N L+P PD+ FPR+N + F ++ + A G
Sbjct: 62 FFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNALSF-----WLMPFSLSLLLFSMASAGW 116
Query: 443 TVYPPLSSNIAHRGRSVXLAXFPLHLA 523
T YPPLSS SV + F LHLA
Sbjct: 117 TFYPPLSS----LSPSVEFSVFSLHLA 139
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 54.0 bits (124), Expect = 3e-06
Identities = 43/182 (23%), Positives = 63/182 (34%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXX 262
+ + +HK IG ++ EL PG D YN T H
Sbjct: 37 LLTVDHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMI 96
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 442
N ++PL+LGA D+AFPR+N + ++ G TG
Sbjct: 97 FLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGW 155
Query: 443 TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV* 622
T Y P S AH +V F + R I++ ++PLFV
Sbjct: 156 TFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVW 212
Query: 623 AV 628
A+
Sbjct: 213 AI 214
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 53.6 bits (123), Expect = 4e-06
Identities = 32/128 (25%), Positives = 46/128 (35%), Gaps = 1/128 (0%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDD-QIYNTXVTAHAXXX 259
I++T+HK +G LY EL G DD +YNT + H
Sbjct: 9 IFTTDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAM 68
Query: 260 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 439
N +PL++GA D+AFPR+N + + +
Sbjct: 69 ILAFQIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIM 128
Query: 440 *TVYPPLS 463
T YPP S
Sbjct: 129 WTGYPPYS 136
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 52.4 bits (120), Expect = 9e-06
Identities = 39/178 (21%), Positives = 59/178 (33%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXX 262
I + +HK +G +Y A+L P + D YN T H
Sbjct: 48 ITTVDHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMI 107
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 442
N +VPL +GA D+AFP +NN+ F ++ G
Sbjct: 108 IFMAMPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGW 166
Query: 443 TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
T Y PL+SN G L +A R ++ ++P+F
Sbjct: 167 TSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMF 224
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 52.0 bits (119), Expect = 1e-05
Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPG-SLXGDDQI--YNTXVTAHAX 253
I + NHK +G Y EL + + + + YN T H
Sbjct: 9 ITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGI 68
Query: 254 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 433
N +P++ G+P++A+PRIN+I E G G
Sbjct: 69 IMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGG 128
Query: 434 TG*TVYPPLSSNI 472
TG T+YPPLS+++
Sbjct: 129 TGWTLYPPLSTSL 141
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 52.0 bits (119), Expect = 1e-05
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+T+HK +G +Y AEL PG ++ +N T H
Sbjct: 35 TTDHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLL 94
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*T 445
N ++PL +GAPD+AFPR+N F + GA G T
Sbjct: 95 YGTPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWT 153
Query: 446 VYPPLSSNIAHRG 484
+Y PLS I G
Sbjct: 154 MYSPLSDAIHSPG 166
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 51.2 bits (117), Expect = 2e-05
Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 3/135 (2%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDD-QIYNTXVTAHAXXX 259
S NHK IG Y EL G + D +IYN T H
Sbjct: 14 SGNHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIM 73
Query: 260 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 439
N L P++LG D+ +PR+N +E G+GTG
Sbjct: 74 VFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTG 133
Query: 440 *TVYPPLSSNIAHRG 484
T+YPPLS+++++ G
Sbjct: 134 WTLYPPLSTSLSNVG 148
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 48.8 bits (111), Expect = 1e-04
Identities = 37/142 (26%), Positives = 50/142 (35%)
Frame = +2
Query: 194 PGSLXGDDQIYNTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 373
PG D + YN +T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 374 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXX 553
I N T T YPP S N + L F +HL
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 554 XXXXXXXXRLXNISFDQLPLFV 619
R +F + LFV
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFV 141
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 48.4 bits (110), Expect = 1e-04
Identities = 32/133 (24%), Positives = 46/133 (34%), Gaps = 1/133 (0%)
Frame = +2
Query: 224 YNTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 403
Y T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 404 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXR 580
G AG G T Y PLS+N+ G L + + R
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 581 LXNISFDQLPLFV 619
+++ +LPL +
Sbjct: 206 APGMTYMRLPLTI 218
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = +2
Query: 413 IVENGAGTG*TVYPPLSSNIAHRGRSVXLAXFPLHLA 523
+VE G G G TVYPPL+S + H G SV A F LHLA
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLA 48
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 46.8 bits (106), Expect = 4e-04
Identities = 37/179 (20%), Positives = 58/179 (32%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXX 262
+ + +HK IG +Y +L P + +++N T H
Sbjct: 27 VSTLDHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMV 86
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 442
N VPL++GA D+AFPR+N+ F + + G
Sbjct: 87 FLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGW 145
Query: 443 TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV 619
Y PLSS + V L + R +S ++PLFV
Sbjct: 146 FSYVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFV 204
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 46.8 bits (106), Expect = 4e-04
Identities = 34/126 (26%), Positives = 46/126 (36%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+TNHKDIG LY EL + G+ YN V+ H
Sbjct: 19 TTNHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFW 78
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 448
N LVPL +GA D+AFPR+N + + G T+
Sbjct: 79 FISPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTM 137
Query: 449 YPPLSS 466
Y PL++
Sbjct: 138 YAPLNT 143
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 46.4 bits (105), Expect = 6e-04
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Frame = +2
Query: 77 K*IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHA 250
K +Y+ NHK I Y EL +P S GD Y VTAH
Sbjct: 53 KYVYTINHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHG 112
Query: 251 XXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 370
N L+P +G+ D+A+PR+N+I F
Sbjct: 113 LIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 46.4 bits (105), Expect = 6e-04
Identities = 40/178 (22%), Positives = 60/178 (33%), Gaps = 2/178 (1%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+ +HKDIG LY EL +YN +T+H
Sbjct: 65 TVDHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFL 124
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG* 442
N +PL++ A D+AFPRIN I F ++ A T
Sbjct: 125 FGTPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSW 183
Query: 443 TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
T+Y PLS ++ +V + LHL R ++ + L +F
Sbjct: 184 TMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIF 239
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 46.0 bits (104), Expect = 8e-04
Identities = 39/177 (22%), Positives = 56/177 (31%)
Frame = +2
Query: 86 YSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXX 265
+ +HK IG Y EL P ++YN +T H
Sbjct: 23 FCVDHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIF 82
Query: 266 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 445
N L+PL++G D+AFPR+N + F V G T
Sbjct: 83 LWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWT 140
Query: 446 VYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
YPPLS G + + L L R+ ++ +PLF
Sbjct: 141 SYPPLSLLSGKWGEELWI--LSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLF 195
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 46.0 bits (104), Expect = 8e-04
Identities = 30/127 (23%), Positives = 43/127 (33%), Gaps = 1/127 (0%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+ +HK IG +Y +L P + + YN +T H
Sbjct: 21 TVDHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFF 80
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*T 445
N +VPL+LGA D+A PR+N + GA G T
Sbjct: 81 FIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWT 140
Query: 446 VYPPLSS 466
Y P S+
Sbjct: 141 FYYPFSA 147
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 44.8 bits (101), Expect = 0.002
Identities = 37/177 (20%), Positives = 56/177 (31%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+T+HK IG +Y +LG P + +YN T H
Sbjct: 28 TTDHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFL 87
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 448
N +VPL++GA D+AFPR+N + V G
Sbjct: 88 GLMPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFA 146
Query: 449 YPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV 619
Y PL+ V + L R ++ +++PLFV
Sbjct: 147 YAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFV 203
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 44.4 bits (100), Expect = 0.002
Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 6/150 (4%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLX----GDDQIYNTXVTAHAXX 256
+T+HK IG LY EL G + IYN +T H
Sbjct: 15 TTSHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLI 74
Query: 257 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF-XXXXXXXXXXXXXXIVENGAG 433
N L+P+++G +++ PR+N I F ++
Sbjct: 75 MLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPIS 134
Query: 434 TG*TVYPPLSSNIAHR-GRSVXLAXFPLHL 520
+G T+YPPLS+ A G ++ L+ +H+
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 44.0 bits (99), Expect = 0.003
Identities = 40/181 (22%), Positives = 61/181 (33%), Gaps = 3/181 (1%)
Frame = +2
Query: 86 YSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXX 265
++T+ K IG Y EL P + D +YN T H
Sbjct: 32 FNTDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLF 91
Query: 266 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG* 442
N L+P ++GAPD+AFP++N F G A +G
Sbjct: 92 LFLFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGW 150
Query: 443 TVYPPLS--SNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
YPP+S + + H L + L+ R + F ++P+F
Sbjct: 151 WSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVF 210
Query: 617 V 619
V
Sbjct: 211 V 211
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 218 QIYNTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 397
+ Y VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 398 XXXXXIVE-NGAGTG*TVYPPLS 463
+ +GA G T YPPLS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLS 168
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 455 PLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV*AV 628
PL+S+IAH G SV +A F LHLA R ++ D++PLF+ AV
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAV 129
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 42.3 bits (95), Expect = 0.009
Identities = 34/176 (19%), Positives = 55/176 (31%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+ NH D+G ++ A+L P S + YN T H
Sbjct: 26 TVNHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFL 85
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 448
L+P +LG+ D+AFPR+ F + +G +
Sbjct: 86 FAIPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFM 144
Query: 449 YPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
YPPLSS + G + + R +S ++P+F
Sbjct: 145 YPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIF 200
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 42.3 bits (95), Expect = 0.009
Identities = 30/127 (23%), Positives = 44/127 (34%), Gaps = 2/127 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXG-DDQIYNTXVTAHAXXX 259
++S + K I Y +LG PG+ D Y +T H
Sbjct: 33 VFSQDAKVIAIQYSLTASAIGLVALVLSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIM 92
Query: 260 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGT 436
N L+PL++GA D+ FP +N + + V G G
Sbjct: 93 VIYLLTALFLGGFGNYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGA 152
Query: 437 G*TVYPP 457
G T+YPP
Sbjct: 153 GWTLYPP 159
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 41.9 bits (94), Expect = 0.012
Identities = 38/145 (26%), Positives = 48/145 (33%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
S +HK IG LYF L +P +YN VT H
Sbjct: 107 SLDHKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFF 166
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 448
N +P+ L D+ PR+N++ G G G T+
Sbjct: 167 FLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTL 224
Query: 449 YPPLSSNIAHRGRSVXLAXFPLHLA 523
YPPLS G V F LHLA
Sbjct: 225 YPPLSI-WEGSGFGVDYLMFSLHLA 248
>UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2;
Yarrowia lipolytica|Rep: Cytochrome c oxidase subunit I
- Yarrowia lipolytica (Candida lipolytica)
Length = 399
Score = 41.5 bits (93), Expect = 0.016
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHA 250
++STN KDI LYF EL N GS L G+ Q +N +TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 41.5 bits (93), Expect = 0.016
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTAHA 250
+YSTN KDI LYF EL PGS L G+ Q++N V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 41.1 bits (92), Expect = 0.022
Identities = 24/64 (37%), Positives = 27/64 (42%)
Frame = +1
Query: 286 NXRIXKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI 465
N I KL P NK +KIL TPL Y N C K C + +NSLP
Sbjct: 59 NSGIRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCC 118
Query: 466 *YRT 477
Y T
Sbjct: 119 KYLT 122
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 41.1 bits (92), Expect = 0.022
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS-LXGDDQIYNTXVTAHAXXX 259
++ST+H D+G LY AEL PG+ D +N T H
Sbjct: 15 MFSTHHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHG-TT 73
Query: 260 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 370
N VP+++ D+A+P++N I F
Sbjct: 74 LIFLFILPFASAVGNYFVPIMVRYKDMAYPKLNAIAF 110
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 40.7 bits (91), Expect = 0.028
Identities = 39/178 (21%), Positives = 55/178 (30%), Gaps = 1/178 (0%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS-LXGDDQIYNTXVTAHAXXXXX 265
+ +HK IG Y +L P + G D+ YN T H
Sbjct: 26 TVDHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMF 84
Query: 266 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 445
LVPL++G IAFPR+N + V+ G G
Sbjct: 85 LFAVPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWF 143
Query: 446 VYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV 619
Y PLS G+ + + R +S D++PLFV
Sbjct: 144 AYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFV 201
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 40.7 bits (91), Expect = 0.028
Identities = 34/128 (26%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNP-GSLXG--DDQIYNTXVTAHAXXX 259
S +HK IG +Y +L G G + Y+ TAH
Sbjct: 52 SVDHKKIGVMYIIVAMIMLLRGFADALMMRTQLAMATGGAHGVFPPEHYDQIFTAHGVIM 111
Query: 260 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 439
N +VPL +GA D+AFP +N++ F V N A TG
Sbjct: 112 IIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTG 170
Query: 440 *TVYPPLS 463
YPPL+
Sbjct: 171 WVAYPPLA 178
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 40.3 bits (90), Expect = 0.038
Identities = 31/176 (17%), Positives = 57/176 (32%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+ NH D+G ++ A+L +P S + Y T H
Sbjct: 26 TVNHTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFL 85
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 448
L+P +LG+ D+A+PR++ F + +G +
Sbjct: 86 FAIPMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFM 144
Query: 449 YPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
YPPL+S + G + + R +S D++P++
Sbjct: 145 YPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIY 200
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 40.3 bits (90), Expect = 0.038
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 302 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSS 466
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST 141
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 39.9 bits (89), Expect = 0.050
Identities = 33/143 (23%), Positives = 44/143 (30%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+T+HK IG LY +L P YN +T HA
Sbjct: 29 TTDHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFF 88
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 448
N +PL LG D+A PR+N G T
Sbjct: 89 FLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTF 148
Query: 449 YPPLSSNIAHRGRSVXLAXFPLH 517
Y PL+ + G SV + L+
Sbjct: 149 YYPLTMDGNQTGVSVFMVAVILN 171
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 39.5 bits (88), Expect = 0.066
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYN 229
++STNHKDIGTLY EL PG+ L G+ Q+YN
Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 39.1 bits (87), Expect = 0.087
Identities = 35/176 (19%), Positives = 56/176 (31%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+ +HK I LY +L P + Q YN +T H
Sbjct: 21 TVDHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFL 80
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 448
N +VPL +GA D++FP +N + F + G T
Sbjct: 81 AAMPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTS 139
Query: 449 YPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
Y LS + +G + L ++ R +++ +LPLF
Sbjct: 140 YASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLF 193
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 38.3 bits (85), Expect = 0.15
Identities = 39/178 (21%), Positives = 56/178 (31%), Gaps = 2/178 (1%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAE--LGNPGSLXGDDQIYNTXVTAHAXXXX 262
ST+HK IG +Y A+ +G G D T H
Sbjct: 73 STDHKKIGIMYVVLALVMLTRAIAEAVLMRAQGAVGLGGGFLSSDHFAQLFST-HGTIMI 131
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 442
N +VPL +GA D+AFP +N+I +V + G
Sbjct: 132 FFMAMPFLTGLI-NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGW 190
Query: 443 TVYPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
YPP + + + G V + L LA R + +PLF
Sbjct: 191 FGYPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLF 248
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 37.9 bits (84), Expect = 0.20
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 302 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 463
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLS 172
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 37.5 bits (83), Expect = 0.26
Identities = 27/105 (25%), Positives = 38/105 (36%)
Frame = +2
Query: 302 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 481
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 482 GRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLF 616
G V + L L+ R + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIF 228
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 37.1 bits (82), Expect = 0.35
Identities = 36/139 (25%), Positives = 48/139 (34%), Gaps = 11/139 (7%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNP-------GSLXG---DDQIYNT 232
I++TNHK IG LY +L P G D YN
Sbjct: 27 IFTTNHKQIGLLYILTSLFFFIGGGVMALLMRVQLAIPRYDLVKYSIFSGRFLDALQYNQ 86
Query: 233 XVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXX 412
VT H L+PL +G+ D+ +PR+N + +
Sbjct: 87 LVTIHGLTMLIWFLGPLGTGFGIY-LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGF 145
Query: 413 IVENG-AGTG*TVYPPLSS 466
+ G TG TVY PLSS
Sbjct: 146 FLPGGNLDTGWTVYEPLSS 164
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 36.7 bits (81), Expect = 0.46
Identities = 23/92 (25%), Positives = 35/92 (38%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXX 262
+ + +HK IG +Y +L PG + +N T HA
Sbjct: 24 VATVDHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMI 83
Query: 263 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 358
N +PL++GA D+AFPR+N
Sbjct: 84 FLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 36.7 bits (81), Expect = 0.46
Identities = 21/82 (25%), Positives = 31/82 (37%)
Frame = +2
Query: 218 QIYNTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 397
+ Y T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 398 XXXXXIVENGAGTG*TVYPPLS 463
G G T YP L+
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLA 171
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 36.7 bits (81), Expect = 0.46
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYN 229
++STNHKDIGT Y EL PG+ L G+ Q+YN
Sbjct: 9 LFSTNHKDIGTPYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 36.7 bits (81), Expect = 0.46
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXV 238
+YSTN KDI LYF EL PGS L G+ Q++N V
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 36.3 bits (80), Expect = 0.61
Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 4/140 (2%)
Frame = +2
Query: 212 DDQIYNTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 391
+ + Y VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 392 XXXXXXXIVENGAGTG-*TVYPPLSS---NIAHRGRSVXLAXFPLHLAXXXXXXXXXXXX 559
+E G +G +YPPLS+ ++ G + + + L
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 560 XXXXXXRLXNISFDQLPLFV 619
R+ +SF +LPL +
Sbjct: 218 TTVINLRVKGMSFTRLPLTI 237
>UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=1;
Saccharomyces cerevisiae|Rep: Putative COX1/OXI3 intron
1 protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 834
Score = 36.3 bits (80), Expect = 0.61
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 83 IYSTNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGS--LXGDDQIYNTXVTA 244
+YSTN KDI LYF EL PGS L G+ Q++N T+
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNGAPTS 61
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 34.3 bits (75), Expect = 2.5
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +2
Query: 188 GNPGSLXGDDQIYNTXVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 367
G PG + + Y + +T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 368 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS 466
F + +G +G T Y LS+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSA 167
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 34.3 bits (75), Expect = 2.5
Identities = 21/107 (19%), Positives = 39/107 (36%)
Frame = +2
Query: 308 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 487
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 488 SVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV*AV 628
+ + ++ +S +++P+FV AV
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAV 211
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 34.3 bits (75), Expect = 2.5
Identities = 21/104 (20%), Positives = 38/104 (36%)
Frame = +2
Query: 308 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 487
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 488 SVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV 619
S + LA R +S ++P+ +
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILM 227
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 33.9 bits (74), Expect = 3.3
Identities = 34/177 (19%), Positives = 54/177 (30%)
Frame = +2
Query: 89 STNHKDIGTLYFXXXXXXXXXXXXXXXXXXAELGNPGSLXGDDQIYNTXVTAHAXXXXXX 268
+ +HK IG Y +L P + Y++ T H
Sbjct: 46 TVDHKRIGLRYIVTAFVFLLLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFL 105
Query: 269 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 448
N L PL+LG+ D+AFPR+ + + G
Sbjct: 106 YALPVLSGFA-NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFN 164
Query: 449 YPPLSSNIAHRGRSVXLAXFPLHLAXXXXXXXXXXXXXXXXXXRLXNISFDQLPLFV 619
Y PL+S G ++ + + L R +S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIV 221
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 10.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 379 TPLPYIINFKKNCRKWCRN 435
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,572,026
Number of Sequences: 1657284
Number of extensions: 6233375
Number of successful extensions: 10764
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 10446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10687
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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