Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_B05
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   6.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.9  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 727 ELRPDDSALGLTVPTGP 777
           +++PD S LG   P GP
Sbjct: 27  DMKPDASTLGQFSPQGP 43


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 184 PFFYL*STHGHNWXLVDEKX*PIPLITAL 98
           PFF   +     W +  E   PIPL+  L
Sbjct: 428 PFFTFCNVLMEMWNIPRENIDPIPLVVVL 456


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 133 HRLXTSYVRVLITNKKMASAGAVLLEARPFRPF 231
           H L T Y ++   N+K     +V+ E +  + F
Sbjct: 93  HLLETQYAKIRTENQKKIFDESVIFERKVMKNF 125


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 217 AEPPGVRHQRSPFFYL*STHGHN 149
           A P   +H+ + F +  + HGHN
Sbjct: 272 ASPLAYQHEYNSFNWTANGHGHN 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,267
Number of Sequences: 336
Number of extensions: 3445
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)