Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_B04
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   4.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.2  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   8.2  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 164 VFGLTLRECTLFYLFIF*LNCIPIN 90
           +F +TLR  TLFY     + C+ I+
Sbjct: 230 IFNITLRRKTLFYTVNLIIPCVGIS 254


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 254 NMXIIYLSRDNVGIHYNNILTQSK 325
           N   ++ +  N+G+H NN+L  ++
Sbjct: 488 NAHSVHAANSNMGLHLNNLLCDAE 511


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 411 KHEIIFQQFQYITYKKNIKM 352
           KH  +F Q   +TY++ +K+
Sbjct: 664 KHNAVFDQLDLVTYEEVVKV 683


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,948
Number of Sequences: 2352
Number of extensions: 12138
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)