Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_B04
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical pr...    28   8.8  
AL034488-2|CAA22448.1|  210|Caenorhabditis elegans Hypothetical ...    28   8.8  

>Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical
           protein C35D6.10 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 310 NVIIMYTYIIS*KINNXHIYLFVYITYVNS*PIFFIP 200
           N I    Y+ S ++NN +IY+F  IT V    + +IP
Sbjct: 201 NKIRKLAYLESTQLNNLYIYIFWLITTVVMFKVIYIP 237


>AL034488-2|CAA22448.1|  210|Caenorhabditis elegans Hypothetical
           protein Y54G11A.2 protein.
          Length = 210

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -2

Query: 510 IEFGW*T-VWFHSNSFNGAH-YLVLH 439
           I++GW   VWFH +  + AH YL LH
Sbjct: 29  IKYGWPEDVWFHVDKLSSAHVYLRLH 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,842,492
Number of Sequences: 27780
Number of extensions: 306697
Number of successful extensions: 492
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)