Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_B02
         (808 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185...   183   1e-46
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387...    54   2e-07
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170...    51   9e-07
05_03_0244 + 10857139-10857516                                         29   3.3  

>05_03_0633 +
           16416913-16417009,16417976-16418060,16418398-16418551,
           16418808-16419023,16419105-16419241,16419317-16419408,
           16419622-16419804,16421722-16421819,16422021-16422070,
           16424605-16424756,16424944-16425069,16426315-16426523
          Length = 532

 Score =  183 bits (446), Expect = 1e-46
 Identities = 97/195 (49%), Positives = 135/195 (69%), Gaps = 2/195 (1%)
 Frame = +1

Query: 34  KPGTENYAVTEAIQKISAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKAT 213
           +PG +N  VTEAIQK++A Y CK +EG+LSHQLKQF IDG K ++ + S A  K  + A 
Sbjct: 108 RPGKKNKDVTEAIQKVAAAYDCKIVEGVLSHQLKQFVIDGNK-VVLSVSNADTKVDD-AE 165

Query: 214 LEKYEVYAMDVLISTGEAVGREMDTR-CTIYKKT-DEVYQLKLKASRMFYSEVRNKHGNM 387
            E+ EVYA+D++ STGE   + +D +  TIYK+  D+ Y LK+KASR  +SE+  K   M
Sbjct: 166 FEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIM 225

Query: 388 PFNLRSFDKETSARLGVVECINHKLIEPFQVLYERPGELVAQFKFTALLLPSGTHRITGL 567
           PF  R+ + E  ARLG+VEC+NH+L++P+ VL+E+PG+LVA  KFT LLLPSG+ R+T  
Sbjct: 226 PFTARALE-EKRARLGLVECMNHELLQPYPVLHEKPGDLVAHIKFTVLLLPSGSQRVTSH 284

Query: 568 PFDKSQCKSERSIKD 612
              + Q    +SI+D
Sbjct: 285 SLQELQ--PTKSIED 297


>12_02_1200 +
           26937624-26937674,26937913-26938005,26938582-26938728,
           26940299-26940379,26940711-26940849,26940977-26941013,
           26941095-26941202,26941434-26941533,26941638-26941783,
           26941862-26941953,26942086-26942180,26942435-26942531,
           26942623-26942766,26942912-26943129,26943213-26943323
          Length = 552

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
 Frame = +1

Query: 100 KPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEAVGRE 279
           K +  +  H +  ++I   KS+   P     K  E+  +E+ E YA++   STG+   RE
Sbjct: 397 KSVRNLNGHSIGPYQIHAGKSV---PIV---KGGEQTKMEEGEFYAIETFGSTGKGFVRE 450

Query: 280 MDTRCTIYKKTDEVYQLKLKASR--MFYSEVRNKHGNMPFNLRSFDK--ETSARLGVVEC 447
            D  C+ Y K  +V  + L+ ++       + N  G + F  R  D+  ET   + +   
Sbjct: 451 -DLECSHYMKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRLGETKYLMALKNL 509

Query: 448 INHKLIEPFQVLYERPGELVAQFKFTALLLPS 543
            +  +++P+  L +  G  V+QF+ T LL P+
Sbjct: 510 CDVGIVQPYPPLCDVRGSYVSQFEHTILLRPT 541


>08_02_1441 -
           27116242-27116354,27116646-27116742,27116841-27117058,
           27117279-27117422,27117512-27117608,27117932-27118026,
           27118140-27118231,27118326-27118471,27118565-27118664,
           27118857-27118964,27119040-27119085,27119210-27119345,
           27119847-27120044
          Length = 529

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
 Frame = +1

Query: 193 KEHEKATLEKYEVYAMDVLISTGEAVGREMDTRCTIYKKTDEVYQLKLKA--SRMFYSEV 366
           K  E+  +E+ E YA++   STG+   RE D  C+ Y K  +V  + L+A  ++     +
Sbjct: 366 KGGEQTKMEEGEFYAIETFGSTGKGYVRE-DLECSHYMKNFDVGHVPLRAAKAKQLLVTI 424

Query: 367 RNKHGNMPFNLRSFDK--ETSARLGVVECINHKLIEPFQVLYERPGELVAQFKFTALLLP 540
            N  G + F  R  D+  ET   + +    +  ++EP   + +  G  V+Q + T LL P
Sbjct: 425 NNNFGTLAFCRRYLDRLGETKYLMALKNLCDAGIVEPCPPMCDVRGSYVSQSEHTILLRP 484

Query: 541 SGTHRIT-GLPFDKSQ-CKSER 600
           +    I+ GLP +     KS R
Sbjct: 485 TCKEVISRGLPSNSDMLAKSNR 506


>05_03_0244 + 10857139-10857516
          Length = 125

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -3

Query: 314 SVFLYI-VHLVSISRPTASPVDIRTSIAYTSYFSSVAFSCSLRCASDGFCIILFSPSIRN 138
           +VFL++ V LV +S   ASP  +    +     SS  +SCS + A+   C+ + SP    
Sbjct: 5   TVFLFLLVALVVVSAAEASPEPLPARRSRFLLTSSSFYSCSKKSAA-AVCLAVGSPGATC 63

Query: 137 CFSWC 123
           C   C
Sbjct: 64  CGGRC 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,461,914
Number of Sequences: 37544
Number of extensions: 410881
Number of successful extensions: 966
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)