Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_B02
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical ... 230 8e-61
AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z81086-5|CAB03119.2| 182|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z78419-1|CAB01705.1| 306|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical ... 30 1.7
AF067947-5|AAO25993.2| 380|Caenorhabditis elegans Hypothetical ... 30 1.7
AF040647-4|AAY55829.1| 152|Caenorhabditis elegans Hypothetical ... 29 3.9
AF016447-5|AAX22290.1| 397|Caenorhabditis elegans Serpentine re... 29 3.9
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 29 5.2
Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF024498-2|AAF39804.2| 318|Caenorhabditis elegans Serpentine re... 28 6.8
Z68134-2|CAA92223.1| 182|Caenorhabditis elegans Hypothetical pr... 28 9.0
U00065-3|AAK68286.3| 981|Caenorhabditis elegans Hypothetical pr... 28 9.0
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 28 9.0
>AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical
protein W08E12.7 protein.
Length = 391
Score = 230 bits (563), Expect = 8e-61
Identities = 106/198 (53%), Positives = 148/198 (74%), Gaps = 1/198 (0%)
Frame = +1
Query: 28 SXKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEK 207
S +P TEN +T+ I K +AE+G PIE MLSHQL++ IDGEK IIQN E Q+ E EK
Sbjct: 167 SLRPDTENTTITKNIDKTAAEFGLTPIENMLSHQLERNEIDGEKKIIQNSGEKQKGEIEK 226
Query: 208 ATLEKYEVYAMDVLISTGEAVGREMDTRCTIYKKTDEV-YQLKLKASRMFYSEVRNKHGN 384
++K+E YA+D+L STG+ ++MDTR T+++K ++V YQLK+KASR+F+S+V HG
Sbjct: 227 IKIDKHEAYAIDILFSTGKGQPKDMDTRTTVFRKNEQVSYQLKMKASRVFFSDVNKVHGP 286
Query: 385 MPFNLRSFDKETSARLGVVECINHKLIEPFQVLYERPGELVAQFKFTALLLPSGTHRITG 564
MPF+LRSF++E A++GVVEC + L+ P+ VLYE+ GELVAQFK T L++P+G +I G
Sbjct: 287 MPFSLRSFEEEVKAKMGVVECEKYGLLVPYPVLYEKEGELVAQFKATVLVMPNGLLKIAG 346
Query: 565 LPFDKSQCKSERSIKDPE 618
LPFD +S+ ++KDPE
Sbjct: 347 LPFDSDVYQSDLTVKDPE 364
>AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical
protein Y116A8A.9 protein.
Length = 444
Score = 52.4 bits (120), Expect = 4e-07
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Frame = +1
Query: 46 ENYAVTEAIQKISAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKY 225
E + ++ Y KPI + H + Q+RI K++ P K E+ +E+
Sbjct: 269 EEVMTSHEVELDGKSYVVKPIRNLNGHSIAQYRIHAGKTV---PIV---KGGEQTKMEEN 322
Query: 226 EVYAMDVLISTGEA-VGREMDTRCTI--YKKTDEVYQLKLKASRMFYSEVRNKHGNMPFN 396
E+YA++ STG+ V +M+T + ++ DE L+L+ S+ + + + F
Sbjct: 323 EIYAIETFGSTGKGYVHDDMETSHYMKNFELADEKIPLRLQKSKGLLNLIDKNFATLAFC 382
Query: 397 LRSFDK--ETSARLGVVECINHKLIEPFQVLYERPGELVAQFKFTALLLPS 543
R D+ ET + + + + +++P+ L + G AQ++ T L+ P+
Sbjct: 383 RRWIDRLGETKYLMALKDLCDKGIVDPYPPLCDVKGCYTAQWEHTILMRPT 433
>Z81086-5|CAB03119.2| 182|Caenorhabditis elegans Hypothetical
protein F53B6.5 protein.
Length = 182
Score = 31.1 bits (67), Expect = 0.97
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +1
Query: 100 KPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEAVGR- 276
KPI + + Q RI EK++ P K E+A +E+ E+YA++ STG+
Sbjct: 38 KPIGSLNGQSIAQCRIHTEKTV---PIV---KGGEQARMEENEIYAIETFGSTGKGYFHD 91
Query: 277 EMDTRCTI--YKKTDEVYQLKLKASRMFYSEVRNKHGNMPF 393
+M+T + ++ DE L+L+ S+ + + + F
Sbjct: 92 DMETSHYMKNFELADEKIPLRLQKSKGLLNLIDKNFATLAF 132
>Z78419-1|CAB01705.1| 306|Caenorhabditis elegans Hypothetical
protein F26A3.1 protein.
Length = 306
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 307 KTDEVYQLKLKASRMFYSEVRNKHGNMPFNLR-SFDKETSARLGVVECINHKL 462
K DE Q LK +FY+ H MP +L+ + R+ + E +NHKL
Sbjct: 50 KKDEDEQKNLKNQYLFYTVSSLNHVRMPDHLKDDGEHRNHDRISLEEQVNHKL 102
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/101 (21%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +1
Query: 43 TENYAVTEAIQKISAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEK 222
T + A +++ A Y K + + H ++ + +++ + ++ EK LEK
Sbjct: 153 TNDPAYNSRLKQRLATYKAKYRDAVHRHNKLVDDVNTTRKLLETTQDECLQKVEKLRLEK 212
Query: 223 YEVYAMDVLISTGEAVGRE-MDTRCTIYKKTDEVYQLKLKA 342
+ A + S G G+E ++ +C YK+ E ++K+K+
Sbjct: 213 -RILAEKLSNSAGNGDGKEELEKKCEDYKRMLEQCKIKIKS 252
>AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical
protein Y39A1B.2 protein.
Length = 1003
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -3
Query: 407 KLRRLNGMLPCLLRTSL*NILEAFSFNWYTSSVFLYIVHLVSISRPTASPVDIRTSIAYT 228
+L+ ++ +LPC + S+ I F+W S +L I ++S + AS V I Y
Sbjct: 290 RLQLIHMLLPCFVCVSIFTIACCCVFSWRRSRPWLAIGGVISAAMAIASAVGILLLAGYG 349
Query: 227 SYFSSVAFS 201
+SVA+S
Sbjct: 350 --MTSVAYS 356
>AF067947-5|AAO25993.2| 380|Caenorhabditis elegans Hypothetical
protein T10B5.2 protein.
Length = 380
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 414 FIKTAQIEWHVAMFVTNLTIEHSGSL*FQLVHLISFFVYCTSGVH 280
+I T Q+ W + V N T++ + VHLI YC S +H
Sbjct: 216 YILTPQLHWDLGFLVQNTTLDL-----YSAVHLIQQTFYCISDLH 255
>AF040647-4|AAY55829.1| 152|Caenorhabditis elegans Hypothetical
protein F54D12.10 protein.
Length = 152
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 311 VFLYIVHLVSISRPT-ASPVDIRTSIAYTSYFSSVAFSCSLRCASDGFCIILFSPSIRNC 135
+FL+ + ++S+ SPV+ TS ++ + SC RC CI++ S S+ C
Sbjct: 9 LFLFPITILSVFVSVRGSPVN-STSYVSKTFLNLTWKSCITRCVIVADCILVHSNSLNRC 67
Query: 134 F 132
+
Sbjct: 68 Y 68
>AF016447-5|AAX22290.1| 397|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 19 protein.
Length = 397
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -3
Query: 386 MLPCLLRTSL*NILEAFSFNWYTSSVFLYIVHLV-SISRPTASPVDIRTSIAYTSYFSSV 210
MLP +R L NI+ F + ++ H+ S + P +R I++ + F +
Sbjct: 114 MLPSNVRV-LVNIILILMFTHSIDMIIFHVYHIFRSYKAVESDPCSVRVKISFCAPFRYI 172
Query: 209 AFSCSLRCASDGFCIIL 159
C+L A +C+ +
Sbjct: 173 YSFCTLGLAFCQYCVYI 189
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 376 HGNMPFNLRSFDKETSARLGVVECINHKLIEPFQVL 483
HG +P N+R +E ARL + + I+ K E V+
Sbjct: 78 HGALPENMREVTREMYARLALFDEISDKKFEKLNVM 113
>Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical
protein C49F5.2 protein.
Length = 708
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 227 SYFSSVAFSCSLRCASDGFC 168
+Y+++V F+CS +CA G C
Sbjct: 423 TYYNTVGFACSPKCACKGAC 442
>AF024498-2|AAF39804.2| 318|Caenorhabditis elegans Serpentine
receptor, class x protein101 protein.
Length = 318
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = -2
Query: 591 LTLAFIKRQASNTMCATRKQKSRELKLCHQFSWTLIENLEWLNEFVVDALNNT 433
L LA K Q ++ RKQKSR+L F + I+ +WL F +D++N+T
Sbjct: 211 LVLAINKNQLDSSTVRRRKQKSRKL-----FIQSCIQ--DWL--FAIDSINST 254
>Z68134-2|CAA92223.1| 182|Caenorhabditis elegans Hypothetical
protein T27A8.3 protein.
Length = 182
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +1
Query: 100 KPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEAVGR- 276
KPI + + Q RI K++ P K E+A +E+ E+YA++ STG+
Sbjct: 38 KPIGSLNGQSIAQCRIHTGKTV---PIV---KGGEQARMEENEIYAIETFGSTGKGYFHD 91
Query: 277 EMDTRCTI--YKKTDEVYQLKLKASR 348
+M+T + ++ DE L+L+ S+
Sbjct: 92 DMETSHYMKNFELADEKIPLRLQKSK 117
>U00065-3|AAK68286.3| 981|Caenorhabditis elegans Hypothetical
protein D1044.8 protein.
Length = 981
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 417 LFIKTAQIEWHVAMFVTNLTIEHSGSL 337
L IK ++++WHVA + L +H SL
Sbjct: 261 LSIKNSRLQWHVAWTLAQLAEQHETSL 287
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 27.9 bits (59), Expect = 9.0
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +1
Query: 277 EMDTRCTIYKKTDEVYQLKLKASRMFYSEVRNKHGNMPFNLRSFDKETSARLGVV--ECI 450
+++ R ++ KK D+ LKASR + EV+ H N+ + S ++ V C
Sbjct: 559 KLEARKSLQKKKDD-----LKASRKSWEEVKINHNNILSSNNSNEENIKTAFDQVLYPCF 613
Query: 451 -NHKLIEPFQVL--YERPGELVAQFK 519
N ++I F ++ Y+ E AQF+
Sbjct: 614 TNQQVIGTFNIIRSYDEVQEGFAQFE 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,138,404
Number of Sequences: 27780
Number of extensions: 381798
Number of successful extensions: 1251
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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