Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_A21
         (394 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical ...   128   1e-30
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    28   2.1  
Z99710-6|CAB16869.1|  362|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z83221-5|CAB05706.2|  578|Caenorhabditis elegans Hypothetical pr...    27   6.3  
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr...    27   6.3  
AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical ...    27   6.3  
AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical ...    27   6.3  
Z72507-1|CAA96633.2|  172|Caenorhabditis elegans Hypothetical pr...    26   8.4  
AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical...    26   8.4  

>AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical
           protein Y48B6A.2 protein.
          Length = 91

 Score =  128 bits (309), Expect = 1e-30
 Identities = 53/85 (62%), Positives = 70/85 (82%)
 Frame = +1

Query: 70  KRLELLGKSGTRYGASLRKMVKKLEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVA 249
           K++ ++GK GTRYGASLRKM KKLEV QH++YTCSFCGK+AMKR   GIW+C +C + VA
Sbjct: 6   KKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKCHKVVA 65

Query: 250 GGAWVFSTTAASSCRSAVRRLREVK 324
           GGA+V+ T  A++ RS +RRLR++K
Sbjct: 66  GGAYVYGTVTAATVRSTIRRLRDLK 90


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 151 QHAKYTCSFCGKDAMKRSCVGIWSCKRC 234
           ++ KY C+ C      R   G+WSCK C
Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254


>Z99710-6|CAB16869.1|  362|Caenorhabditis elegans Hypothetical
           protein F08A8.6 protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +1

Query: 58  PNVPKRLE--LLGKSGTRYGASLRKMVKKLEVTQHAKYTCSFC 180
           P  PK LE  LLG    +  A     VKK+++  H   T  FC
Sbjct: 24  PLKPKHLETILLGTHTEKSSAIFWSSVKKIKLENHPVLTWKFC 66


>Z83221-5|CAB05706.2|  578|Caenorhabditis elegans Hypothetical
           protein C49A1.9 protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
 Frame = +1

Query: 121 RKMVKKLEVTQHAKYTCSFCGKDA----MKRSCVGIWSCKRCKRTV-AGGAWVFSTTAAS 285
           R+   +L++    ++T + C K A    MK S     S      TV +   W+F+TT   
Sbjct: 95  RESSTELKIAVKMEFTANTCSKTATANTMKNSVATDTSYLEYTMTVNSESQWIFTTTITL 154

Query: 286 SCRSAVRRLREVK*F 330
           +C    R  +  K F
Sbjct: 155 NCPVGYRLFKRPKGF 169


>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical
           protein K10D2.3 protein.
          Length = 1425

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -1

Query: 148 LLPAF*PFYVERHRN-VCQICQVIP 77
           L   F  +YVERHR+ V QI Q+IP
Sbjct: 578 LFIGFFRYYVERHRDVVIQITQLIP 602


>AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical
           protein F16B4.2a protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 196 KRSCVGIWSCKRCKRTVAGGAWVFSTT 276
           K  C+  W+C  C +T+   +W F +T
Sbjct: 333 KEKCILDWTCSTCDKTIE--SWYFRST 357


>AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical
           protein F16B4.2b protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 196 KRSCVGIWSCKRCKRTVAGGAWVFSTT 276
           K  C+  W+C  C +T+   +W F +T
Sbjct: 338 KEKCILDWTCSTCDKTIE--SWYFRST 362


>Z72507-1|CAA96633.2|  172|Caenorhabditis elegans Hypothetical
           protein F17C11.1 protein.
          Length = 172

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 178 CGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRS 297
           CGK  + R+C  +    +C        W F+TTAA++  S
Sbjct: 69  CGKSPVNRNCTALVPDSKCV-----FKWAFATTAAATACS 103


>AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical
           protein Y38F1A.9 protein.
          Length = 108

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 94  SGTRYGASLRKMVKKLEVTQHAK 162
           +G RY + ++KMV K  VT H K
Sbjct: 45  TGDRYVSKIKKMVGKFTVTLHIK 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,201,399
Number of Sequences: 27780
Number of extensions: 169837
Number of successful extensions: 551
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)