Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_A20
(859 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 54 1e-09
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 53 4e-09
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 44 2e-06
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 38 1e-04
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 32 0.008
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 25 0.68
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 54.4 bits (125), Expect = 1e-09
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Frame = +3
Query: 339 CYLDESDVKPRVRWYKDGTLLGDSKDPGTLLPPRVQMHANFS--IQINEIRESDTAAYTC 512
C + D + W KDG P L + +S + I + + YTC
Sbjct: 632 CGVAAGDPPLTISWLKDGQ--SPFPLPPNLASANISQLDPYSSLLSITNLAAEHSGDYTC 689
Query: 513 EVIRPEPWGPIRQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVVEWRK 692
+ P +R T ++V+ PP + P D + V++ + V + C+ G P P + W+K
Sbjct: 690 --VAANPAAEVRYTAKLQVKVPPRWIVEPTD--VSVERNKHVALHCQAQGVPTPTIVWKK 745
Query: 693 -----DGEVMEILXHRSXIRFKASHRM--------QAGAYECIANNGVGSPVAASIRVII 833
GE E L R+ + ++ + + G Y C A+NG+GS + +++ +
Sbjct: 746 ATGSKSGEYEE-LRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKV 804
Query: 834 QDAPVXIA 857
+P A
Sbjct: 805 NSSPYFAA 812
Score = 44.4 bits (100), Expect = 1e-06
Identities = 44/181 (24%), Positives = 68/181 (37%), Gaps = 4/181 (2%)
Frame = +3
Query: 315 KDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKDPGTLLPPRVQMHANFSIQINEIRESD 494
+DE+ L C + ++ P RWY S+ L PR ++ + + + + D
Sbjct: 251 QDESTSLVC-VAQACPTPEYRWYAQT----GSEPMLVLSGPRTRLLGSV-LALEAVTLED 304
Query: 495 TAAYTCEVIRPEPWGPIRQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFP-- 668
Y C P G + V P V P L V G + CE + P
Sbjct: 305 NGIYRCSA--SNPGGEASAEIRLIVTAPLHVEVTPP--LLSVHLGGNAEFRCEVSTHPQA 360
Query: 669 -PPVVEWRKDGEVMEILXHRSXI-RFKASHRMQAGAYECIANNGVGSPVAASIRVIIQDA 842
P + W KDG + +S + R +R G Y+CI G AS + + +A
Sbjct: 361 GPHFITWYKDGRQLPGTGRQSELLRLNGINREDRGMYQCIVRRSEGDTAQASAELQLGNA 420
Query: 843 P 845
P
Sbjct: 421 P 421
Score = 37.9 bits (84), Expect = 1e-04
Identities = 48/167 (28%), Positives = 64/167 (38%), Gaps = 18/167 (10%)
Frame = +3
Query: 372 VRWYKDGTLLGDSKDPGTLLPPRVQMHANFSIQINEIRESDTAAYTCEVIRPEPWGPIRQ 551
+ WYKDG L PGT + +++N I D Y C V R E G Q
Sbjct: 365 ITWYKDGRQL-----PGTGRQSEL-------LRLNGINREDRGMYQCIVRRSE--GDTAQ 410
Query: 552 THSVEVQY---PPTVMTIPDDGFLE--VKKGEFVDIGCETTGFPPPVVEWRKDGEVME-- 710
S E+Q PP ++ F+E ++ G V + C G P P V W DG +
Sbjct: 411 A-SAELQLGNAPPMLLY----SFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFALPTN 465
Query: 711 --------ILXHRSXI-RFKASHRM--QAGAYECIANNGVGSPVAAS 818
+ H I SH M G Y C+A N G A+
Sbjct: 466 GRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAGKVTHAA 512
Score = 34.7 bits (76), Expect = 0.001
Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 8/169 (4%)
Frame = +3
Query: 366 PRVRWYKDGTLLGDSKDPGTLLPPRVQMHANF--SIQINEIRESDTAAYTCEVIRPEPWG 539
P+V W DG L + ++ V +H + + I+ + D Y+C + G
Sbjct: 451 PQVTWALDGFAL--PTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSC--MAENRAG 506
Query: 540 PIRQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVVEWRK------DGE 701
+ + V P + IP + GE + + C G+P ++W + D
Sbjct: 507 KVTHAARLNVYGLPYIRLIPK---VTAVAGETLRLKCPVAGYPIEEIKWERANRELPDDL 563
Query: 702 VMEILXHRSXIRFKASHRMQAGAYECIANNGVGSPVAASIRVIIQDAPV 848
++L + + + AG Y C A N G S V + P+
Sbjct: 564 RQKVLPDGTLVITSVQKKGDAGVYTCSARNKQGHSARRSGDVAVIVPPI 612
Score = 31.9 bits (69), Expect = 0.008
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
Frame = +3
Query: 294 PVTVKSYKDETVLLPCYLDESDVKPRVRWYK-DGTLLGDSKDPGTLLPPRVQMHANFSIQ 470
P V +++ V L C + P + W K G+ G+ ++ ++ +N ++
Sbjct: 716 PTDVSVERNKHVALHCQA-QGVPTPTIVWKKATGSKSGEYEELRERAYTKIL--SNGTLL 772
Query: 471 INEIRESDTAAYTCEVIRPEPWGPIRQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGC 650
+ ++E Y C+ G I + ++V P P + VKKG+ + C
Sbjct: 773 LQHVKEDREGFYLCQASNGIGSG-IGKVVQLKVNSSP-YFAAPSR-LVTVKKGDTATLHC 829
Query: 651 ETTGFPPPVVEWRKDGEV 704
E G P V W K G++
Sbjct: 830 EVHGDTPVTVTWLKGGKI 847
Score = 29.9 bits (64), Expect = 0.031
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Frame = +3
Query: 576 PPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVVEW-RKDGE-VMEILXHRSXIR---- 737
P VM P G ++D C TG PP ++W DG V ++ R +R
Sbjct: 30 PSFVMEPPSRVEFSNSSGAWLD--CTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTL 87
Query: 738 ----FKAS---HRMQAGAYECIANNGVGSPVAASIRV 827
F A+ + + AY C+A+N VG ++ ++V
Sbjct: 88 VLLPFPAAAFRQDVHSAAYRCVASNSVGRVLSRDVQV 124
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 52.8 bits (121), Expect = 4e-09
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 13/192 (6%)
Frame = +3
Query: 321 ETVLLPCYLDESDVKPRVRWYKDGTLLGDSKDPGTLLPPRVQMHANFSIQINEIRESDTA 500
E L C + D+ + W KDG +G S+ + + + N + I +
Sbjct: 626 ERTTLTCSVTRGDLPLSISWLKDGRAMGPSE---RVHVTNMDQY-NSILMIEHLSPDHNG 681
Query: 501 AYTCEVIRPEPWGPIRQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVV 680
Y+C + + T + V PP + P D + V++ + V + C+ G P P +
Sbjct: 682 NYSC--VARNLAAEVSHTQRLVVHVPPRWIVEPTD--VSVERNKHVALHCQAQGVPTPTI 737
Query: 681 EWRK-----DGEVMEILXHRSXIRFKASHRM--------QAGAYECIANNGVGSPVAASI 821
W+K GE E L R+ + ++ + + G Y C A+NG+GS + +
Sbjct: 738 VWKKATGSKSGEYEE-LRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIGSGIGKVV 796
Query: 822 RVIIQDAPVXIA 857
++ + +P A
Sbjct: 797 QLKVNSSPYFAA 808
Score = 44.4 bits (100), Expect = 1e-06
Identities = 44/181 (24%), Positives = 68/181 (37%), Gaps = 4/181 (2%)
Frame = +3
Query: 315 KDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKDPGTLLPPRVQMHANFSIQINEIRESD 494
+DE+ L C + ++ P RWY S+ L PR ++ + + + + D
Sbjct: 251 QDESTSLVC-VAQACPTPEYRWYAQT----GSEPMLVLSGPRTRLLGSV-LALEAVTLED 304
Query: 495 TAAYTCEVIRPEPWGPIRQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFP-- 668
Y C P G + V P V P L V G + CE + P
Sbjct: 305 NGIYRCSA--SNPGGEASAEIRLIVTAPLHVEVTPP--LLSVHLGGNAEFRCEVSTHPQA 360
Query: 669 -PPVVEWRKDGEVMEILXHRSXI-RFKASHRMQAGAYECIANNGVGSPVAASIRVIIQDA 842
P + W KDG + +S + R +R G Y+CI G AS + + +A
Sbjct: 361 GPHFITWYKDGRQLPGTGRQSELLRLNGINREDRGMYQCIVRRSEGDTAQASAELQLGNA 420
Query: 843 P 845
P
Sbjct: 421 P 421
Score = 37.9 bits (84), Expect = 1e-04
Identities = 48/167 (28%), Positives = 64/167 (38%), Gaps = 18/167 (10%)
Frame = +3
Query: 372 VRWYKDGTLLGDSKDPGTLLPPRVQMHANFSIQINEIRESDTAAYTCEVIRPEPWGPIRQ 551
+ WYKDG L PGT + +++N I D Y C V R E G Q
Sbjct: 365 ITWYKDGRQL-----PGTGRQSEL-------LRLNGINREDRGMYQCIVRRSE--GDTAQ 410
Query: 552 THSVEVQY---PPTVMTIPDDGFLE--VKKGEFVDIGCETTGFPPPVVEWRKDGEVME-- 710
S E+Q PP ++ F+E ++ G V + C G P P V W DG +
Sbjct: 411 A-SAELQLGNAPPMLLY----SFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFALPTN 465
Query: 711 --------ILXHRSXI-RFKASHRM--QAGAYECIANNGVGSPVAAS 818
+ H I SH M G Y C+A N G A+
Sbjct: 466 GRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAGKVTHAA 512
Score = 33.5 bits (73), Expect = 0.003
Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Frame = +3
Query: 366 PRVRWYKDGTLLGDSKDPGTLLPPRVQMHANF--SIQINEIRESDTAAYTCEVIRPEPWG 539
P+V W DG L + ++ V +H + + I+ + D Y+C + G
Sbjct: 451 PQVTWALDGFAL--PTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSC--MAENRAG 506
Query: 540 PIRQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVVEWRK------DGE 701
+ + V P + IP + GE + + C G+P ++W + D
Sbjct: 507 KVTHAARLNVYGLPYIRLIPK---VTAVAGETLRLKCPVAGYPIEEIKWERANRELPDDL 563
Query: 702 VMEILXHRSXIRFKASHRMQAGAYECIANNGVG 800
++L + + + AG Y C A N G
Sbjct: 564 RQKVLPDGTLVITSVQKKGDAGVYTCSARNKQG 596
Score = 31.9 bits (69), Expect = 0.008
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
Frame = +3
Query: 294 PVTVKSYKDETVLLPCYLDESDVKPRVRWYK-DGTLLGDSKDPGTLLPPRVQMHANFSIQ 470
P V +++ V L C + P + W K G+ G+ ++ ++ +N ++
Sbjct: 712 PTDVSVERNKHVALHCQA-QGVPTPTIVWKKATGSKSGEYEELRERAYTKIL--SNGTLL 768
Query: 471 INEIRESDTAAYTCEVIRPEPWGPIRQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGC 650
+ ++E Y C+ G I + ++V P P + VKKG+ + C
Sbjct: 769 LQHVKEDREGFYLCQASNGIGSG-IGKVVQLKVNSSP-YFAAPSR-LVTVKKGDTATLHC 825
Query: 651 ETTGFPPPVVEWRKDGEV 704
E G P V W K G++
Sbjct: 826 EVHGDTPVTVTWLKGGKI 843
Score = 29.9 bits (64), Expect = 0.031
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Frame = +3
Query: 576 PPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVVEW-RKDGE-VMEILXHRSXIR---- 737
P VM P G ++D C TG PP ++W DG V ++ R +R
Sbjct: 30 PSFVMEPPSRVEFSNSSGAWLD--CTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTL 87
Query: 738 ----FKAS---HRMQAGAYECIANNGVGSPVAASIRV 827
F A+ + + AY C+A+N VG ++ ++V
Sbjct: 88 VLLPFPAAAFRQDVHSAAYRCVASNSVGRVLSRDVQV 124
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 43.6 bits (98), Expect = 2e-06
Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 12/183 (6%)
Frame = +3
Query: 333 LPCYLDESDVKPRVRWYKDGTLLGDSKDPGTLLPPRVQMHANFSIQINEIRESDTAAYTC 512
L C + D+ +RW G +G S +L +V + + I+ I Y C
Sbjct: 603 LQCIVPTGDLPLNIRWSYPGEEMGGSSG---VLAKKVADRVSM-LMISVITARHAGEYVC 658
Query: 513 EVIRPEPWGPIRQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVVEWRK 692
G + ++ V PP + P D +G + C+ GFP P V W+K
Sbjct: 659 TAENAA--GTASHSTTLTVNVPPRWILEPTDKAFA--QGSDARVECKADGFPKPQVTWKK 714
Query: 693 -----DGEVMEILXHRSXIRFKAS-------HRMQAGAYECIANNGVGSPVAASIRVIIQ 836
G+ ++ I + + G Y C A NG+G+ ++A I + +Q
Sbjct: 715 AAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQ 774
Query: 837 DAP 845
P
Sbjct: 775 APP 777
Score = 38.7 bits (86), Expect = 7e-05
Identities = 38/151 (25%), Positives = 59/151 (39%)
Frame = +3
Query: 366 PRVRWYKDGTLLGDSKDPGTLLPPRVQMHANFSIQINEIRESDTAAYTCEVIRPEPWGPI 545
P RWYK + G S+ L RV+ + I I E R D+ Y C ++ G
Sbjct: 242 PVHRWYK--FIEGSSRRQPVQLNERVRQVSGTLI-IREARVEDSGKYLC-IVNNSVGGES 297
Query: 546 RQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVVEWRKDGEVMEILXHR 725
+T + V P P ++ G C G P V W KDG+ + +
Sbjct: 298 VET-VLTVTAPLGAEIEPSTQTIDF--GRPATFTCNVRGNPIKTVSWLKDGKPLGL--EE 352
Query: 726 SXIRFKASHRMQAGAYECIANNGVGSPVAAS 818
+ +R ++ + G Y+C N S A +
Sbjct: 353 AVLRIESVKKEDKGMYQCFVRNDQESAQATA 383
Score = 32.7 bits (71), Expect = 0.004
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Frame = +3
Query: 567 VQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVVEWRKDGEVMEILXH-----RSX 731
V+ P + + DD F K E V + C G P P V W+ G V++
Sbjct: 1273 VRVPAKIASF-DDKFTATYK-EDVKLPCLAVGVPAPEVTWKVRGAVLQSSDRLRQLPEGS 1330
Query: 732 IRFKASHRMQAGAYECIANNGVG 800
+ K R AG Y C N G
Sbjct: 1331 LFIKEVDRTDAGEYSCYVENTFG 1353
Score = 31.9 bits (69), Expect = 0.008
Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 6/166 (3%)
Frame = +3
Query: 366 PRVRWYKDGTLLGDSKDPGTLLPPRVQMHANFSIQINEIRESDTAAYTCEVIRPEPWGPI 545
P + W DG L +++ V + I+ +D Y C I G
Sbjct: 423 PEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKC--IAASKVGSA 480
Query: 546 RQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVVEWRKDGEVM------ 707
+ + V P + + + GE + + C G+P + W +D V+
Sbjct: 481 EHSARLNVYGLPFIRHMDKKAIVA---GETLRVTCPVAGYPIESIVWERDTRVLPINRKQ 537
Query: 708 EILXHRSXIRFKASHRMQAGAYECIANNGVGSPVAASIRVIIQDAP 845
++ + + I Y C+A N G ++ V + P
Sbjct: 538 KVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVPP 583
Score = 29.5 bits (63), Expect = 0.041
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Frame = +3
Query: 465 IQINEIRESDTAAYTCEVIRPEPWGPIRQTHSVEVQYPPTVMTIPDDGFLE--VKKGEFV 638
++I +++ D Y C V + + ++ P + F E ++ G +
Sbjct: 355 LRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIR---QAFAEETLQPGPSM 411
Query: 639 DIGCETTGFPPPVVEWRKDG------EVMEILXH-------RSXIRFKASHRMQAGAYEC 779
+ C +G P P + W DG E +++ + S + ++H G Y+C
Sbjct: 412 FLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKC 471
Query: 780 IANNGVGS 803
IA + VGS
Sbjct: 472 IAASKVGS 479
Score = 26.2 bits (55), Expect = 0.39
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Frame = +3
Query: 648 CETTGFPPPVVEW---------RKDGEVMEILXHRSXIRFKASHRMQ-AGAYECIANNGV 797
C GFP PV W R+ ++ E + S R++ +G Y CI NN V
Sbjct: 234 CPAQGFPVPVHRWYKFIEGSSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLCIVNNSV 293
Query: 798 GSPVAASIRVI 830
G ++ +
Sbjct: 294 GGESVETVLTV 304
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 37.9 bits (84), Expect = 1e-04
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 612 LEVKKGEFVDIGCETTGFPPPVVEWRKDGEVMEIL 716
+ + G+ V+I C+ TG PPP + WR++G +E L
Sbjct: 320 ISARVGDNVEIKCDVTGTPPPPLVWRRNGADLETL 354
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 31.9 bits (69), Expect = 0.008
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 612 LEVKKGEFVDIGCETTGFPPPVVEWRKDGEVMEILXHR 725
L+ G + C TGFP P + W KDG +E+ H+
Sbjct: 32 LDYMLGRKITFFCMATGFPRPEITWLKDG--IELYHHK 67
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 25.4 bits (53), Expect = 0.68
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -2
Query: 177 VGNKSKVICCKCCNQTIKKV---TQNHTSGKLKRKYHNIQIKKLLRRVY 40
V NK+ +I + + + ++ T NH S K+ + N+ +K++ +VY
Sbjct: 205 VDNKNTLIIYQNADDSFHRLSSHTLNHNSDKMSDQQENLTLKEVDNKVY 253
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,572
Number of Sequences: 438
Number of extensions: 5835
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -