Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_A17
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-6|CAB63334.1|  175|Caenorhabditis elegans Hypothetical pr...   130   8e-31
Z81491-7|CAI46570.1|  184|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U41546-6|AAC48223.1|  798|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z82077-6|CAB63334.1|  175|Caenorhabditis elegans Hypothetical
           protein W09C5.8 protein.
          Length = 175

 Score =  130 bits (315), Expect = 8e-31
 Identities = 64/147 (43%), Positives = 88/147 (59%)
 Frame = +1

Query: 193 KIGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTL 372
           K   RE VGYG NG   Y DR D+  PAIRFR++   I  +R KE+ DW+ L+ EEKK L
Sbjct: 29  KAAGRELVGYGANGDNIYQDRLDYWYPAIRFRKEDSVIAPIRAKEQADWKNLSAEEKKLL 88

Query: 373 YRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQ 552
           YR SF QT +EF+APTG WK +    L +  L  +  + + V VY  +P +   E ++AQ
Sbjct: 89  YRYSFRQTLSEFEAPTGYWKVISAVILSVLGLCTYYAVLLNVCVYPELPPTFQNEYKEAQ 148

Query: 553 LQRMLDLKVNPIDGLASKWDYENNRWK 633
           ++R L L+     G  + +DYEN +WK
Sbjct: 149 VERALVLEKGQFLGAPTHYDYENKKWK 175


>Z81491-7|CAI46570.1|  184|Caenorhabditis elegans Hypothetical
           protein D1086.11 protein.
          Length = 184

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +1

Query: 451 LVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASKW---DYEN 621
           ++   L   + ++  V+  SP+  S  EE QK      LD++ NP D    KW   DY++
Sbjct: 1   MIWQVLITLVVLSATVYSESPLTPSKIEECQKT-CGVPLDIRTNPDDTKCKKWNNCDYDD 59

Query: 622 NR 627
            +
Sbjct: 60  RK 61


>U41546-6|AAC48223.1|  798|Caenorhabditis elegans Hypothetical
           protein T25B6.2 protein.
          Length = 798

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 160 GXGSTGNTELAKIGDREWVGYGFNGQ 237
           G G TG  EL    D E V +GFNG+
Sbjct: 607 GQGGTGGHELTHGYDDEGVQFGFNGE 632


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,197,719
Number of Sequences: 27780
Number of extensions: 416281
Number of successful extensions: 1183
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)