Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_A14
         (824 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024413-1|ABC86475.1|  107|Drosophila melanogaster IP03587p pro...   101   2e-21
AE014297-1989|AAF55162.1|   76|Drosophila melanogaster CG14865-P...    71   3e-12
AY051796-1|AAK93220.1|  800|Drosophila melanogaster LD31211p pro...    31   1.9  
AL031766-1|CAA21136.1|  348|Drosophila melanogaster EG:84H4.3 pr...    31   1.9  
AJ238970-1|CAB53186.1|  800|Drosophila melanogaster cap binding ...    31   1.9  
AE014298-657|AAF45970.1|  800|Drosophila melanogaster CG7035-PB,...    31   1.9  
AE014298-656|AAN09124.1|  800|Drosophila melanogaster CG7035-PA,...    31   1.9  
BT022811-1|AAY55227.1|  460|Drosophila melanogaster IP12342p pro...    29   7.7  
AE014297-4406|AAF56911.2|  457|Drosophila melanogaster CG18110-P...    29   7.7  

>BT024413-1|ABC86475.1|  107|Drosophila melanogaster IP03587p
           protein.
          Length = 107

 Score =  101 bits (241), Expect = 2e-21
 Identities = 40/89 (44%), Positives = 67/89 (75%), Gaps = 2/89 (2%)
 Frame = +1

Query: 154 SKRSTFSYGVPFILFVVGGSFGLREWTQIRYQFSQVKGVSKEEAEKMG--LHREKTVSLD 327
           S R +F YG+PF++ +V GSFGL++++ +RYQ+++ + V+ EE +K G  +   K V+L+
Sbjct: 13  STRKSFKYGIPFLIMMVAGSFGLQQFSNLRYQYAKKQPVTPEEMKKYGVSMKNRKDVTLE 72

Query: 328 TAYEEIQKLDIDNWENKRGPRPWEINESK 414
           + Y++++ +DI+NWENKRGPRPWE  E +
Sbjct: 73  SEYDKVKSVDIENWENKRGPRPWEEQEDQ 101


>AE014297-1989|AAF55162.1|   76|Drosophila melanogaster CG14865-PA
           protein.
          Length = 76

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = +1

Query: 199 VVGGSFGLREWTQIRYQFSQVKGVSKEEAEKMG--LHREKTVSLDTAYEEIQKLDIDNWE 372
           +V GSFGL++     YQ+++ + V+ EE +K G  +   K V+L++ Y++++ +DI+NWE
Sbjct: 2   MVAGSFGLQQ-----YQYAKKQPVTPEEMKKYGVSMKNRKDVTLESEYDKVKSVDIENWE 56

Query: 373 NKRGPRPWEINESK 414
           NKRGPRPWE  E +
Sbjct: 57  NKRGPRPWEEQEDQ 70


>AY051796-1|AAK93220.1|  800|Drosophila melanogaster LD31211p
           protein.
          Length = 800

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 322 LDTAYEEIQKLDIDNWENKRGPRPWEINES 411
           LD  + +I+KL  DNW  K  PRP+ + +S
Sbjct: 232 LDCLWAQIRKLRQDNWAEKHIPRPYLVFDS 261


>AL031766-1|CAA21136.1|  348|Drosophila melanogaster EG:84H4.3
           protein.
          Length = 348

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 322 LDTAYEEIQKLDIDNWENKRGPRPWEINES 411
           LD  + +I+KL  DNW  K  PRP+ + +S
Sbjct: 232 LDCLWAQIRKLRQDNWAEKHIPRPYLVFDS 261


>AJ238970-1|CAB53186.1|  800|Drosophila melanogaster cap binding
           protein 80 protein.
          Length = 800

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 322 LDTAYEEIQKLDIDNWENKRGPRPWEINES 411
           LD  + +I+KL  DNW  K  PRP+ + +S
Sbjct: 232 LDCLWAQIRKLRQDNWAEKHIPRPYLVFDS 261


>AE014298-657|AAF45970.1|  800|Drosophila melanogaster CG7035-PB,
           isoform B protein.
          Length = 800

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 322 LDTAYEEIQKLDIDNWENKRGPRPWEINES 411
           LD  + +I+KL  DNW  K  PRP+ + +S
Sbjct: 232 LDCLWAQIRKLRQDNWAEKHIPRPYLVFDS 261


>AE014298-656|AAN09124.1|  800|Drosophila melanogaster CG7035-PA,
           isoform A protein.
          Length = 800

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 322 LDTAYEEIQKLDIDNWENKRGPRPWEINES 411
           LD  + +I+KL  DNW  K  PRP+ + +S
Sbjct: 232 LDCLWAQIRKLRQDNWAEKHIPRPYLVFDS 261


>BT022811-1|AAY55227.1|  460|Drosophila melanogaster IP12342p
           protein.
          Length = 460

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 711 YLWCRVCVTQAQAHYNEKDFVTFALIPFHYSIXTAHLL 824
           Y W +  + +   H +E DF    +IP + SI  A  L
Sbjct: 69  YYWVQTSIERTDMHVSEIDFPAVTIIPINLSILKAEKL 106


>AE014297-4406|AAF56911.2|  457|Drosophila melanogaster CG18110-PA
           protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 711 YLWCRVCVTQAQAHYNEKDFVTFALIPFHYSIXTAHLL 824
           Y W +  + +   H +E DF    +IP + SI  A  L
Sbjct: 66  YYWVQTSIERTDMHVSEIDFPAVTIIPINLSILKAEKL 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,741,015
Number of Sequences: 53049
Number of extensions: 712784
Number of successful extensions: 1477
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)