Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_A12
         (776 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.2  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    21   9.7  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    21   9.7  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    21   9.7  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    21   9.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   9.7  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   9.7  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   9.7  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   9.7  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   9.7  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   9.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 529 RTSACALDMGPAVNGALRISAE 594
           RT   ALD  P   G LR+  E
Sbjct: 340 RTEEVALDRTPVTQGLLRVKKE 361


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 99  PEPFPVYY 122
           P PFPVYY
Sbjct: 114 PVPFPVYY 121


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 99  PEPFPVYY 122
           P PFPVYY
Sbjct: 114 PVPFPVYY 121


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 99  PEPFPVYY 122
           P PFPVYY
Sbjct: 114 PVPFPVYY 121


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 99  PEPFPVYY 122
           P PFPVYY
Sbjct: 114 PVPFPVYY 121


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 322 SSAVGRTHNL*FVIAG 369
           S  VGRTH + ++I G
Sbjct: 147 SGIVGRTHTVGYIIIG 162


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 99  PEPFPVYY 122
           P PFPVYY
Sbjct: 347 PVPFPVYY 354


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 99  PEPFPVYY 122
           P PFPVYY
Sbjct: 347 PVPFPVYY 354


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 99  PEPFPVYY 122
           P PFPVYY
Sbjct: 347 PVPFPVYY 354


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 99  PEPFPVYY 122
           P PFPVYY
Sbjct: 347 PVPFPVYY 354


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 99  PEPFPVYY 122
           P PFPVYY
Sbjct: 336 PVPFPVYY 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,691
Number of Sequences: 438
Number of extensions: 6085
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)