Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_A11
         (800 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    29   0.066
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   1.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.9  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   2.5  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   2.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   2.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   4.4  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 0.066
 Identities = 21/100 (21%), Positives = 38/100 (38%)
 Frame = +1

Query: 382 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFAS 561
           C  C+K      + + +   H  E  ++C  C          SK  K++    +  +   
Sbjct: 178 CTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTC----SKQLKVHT-RTHTGEKPY 232

Query: 562 RCDGCGEVFRAGTKKMEYKTRQWHEKCFCCVVCKNPIGTK 681
            CD CG+ F        ++   + EK + C +C    G+K
Sbjct: 233 TCDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSK 272



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/50 (22%), Positives = 19/50 (38%)
 Frame = +1

Query: 562 RCDGCGEVFRAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIY 711
           RC+ CG+ F    +   +      EK + C  C      K  +   + I+
Sbjct: 93  RCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIH 142


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = +1

Query: 256 KDWHSGHFCCWQCDESLTGQRYVLRD--EHPYCIKC 357
           K + +G  CCW C       +Y +RD  +   CI C
Sbjct: 597 KKYVAGEQCCWHC---FNCTQYQIRDHKDVTQCISC 629


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 271 GHFCCWQCDESLTGQRYVLRDEHPYCIKC 357
           G  CCW CD+      YV  DE+  C+ C
Sbjct: 463 GDTCCWVCDQ-CEEYEYV-HDEYT-CMDC 488


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 271 GHFCCWQCDESLTGQRYVLRDEHPYCIKC 357
           G  CCW CD+      YV  DE+  C+ C
Sbjct: 553 GDTCCWVCDQ-CEEYEYVY-DEYT-CMDC 578


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 343 YCIKCYESVFANGCEECNKIIGIDSKDLSY 432
           Y +     + ANG  E  KI+ +  KD+ Y
Sbjct: 10  YILSVAVIIRANGINEILKIMAVSMKDIRY 39


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 456 GLVPVLVLVRQILRVNADDLVALFAAVGEDAFIALDAVGVFI 331
           GL+  L L R+ILR++A D  ++  AVG    +    + VFI
Sbjct: 213 GLIGCLTLGRRILRLDAIDEASI--AVGASGNVFAGYLLVFI 252


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 400 IIGIDSKDLSYKDKHWH 450
           +IGI S+D ++ DK+ H
Sbjct: 125 VIGISSRDSAFSDKNIH 141


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 598 TKKMEYKTRQWHEKCFCCVV 657
           TK   +   QWH K F  V+
Sbjct: 66  TKNYPFDVDQWHNKTFLAVI 85


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 598 TKKMEYKTRQWHEKCFCCVVCKNPI 672
           TK       QWH K F  V+  N +
Sbjct: 67  TKNYPLDVDQWHNKTFLAVIRYNGV 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,662
Number of Sequences: 438
Number of extensions: 2943
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)