Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_A08
(856 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 183 8e-46
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 183 8e-46
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 183 8e-46
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 183 8e-46
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 183 8e-46
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 183 8e-46
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 183 8e-46
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 182 1e-45
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 39 0.027
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 39 0.027
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 38 0.046
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 38 0.046
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 38 0.046
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 38 0.046
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 38 0.061
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 38 0.061
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 38 0.061
D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein. 36 0.14
BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation ... 36 0.14
BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation ... 36 0.14
BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation ... 36 0.14
AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein. 36 0.14
AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spli... 36 0.14
AC005057-2|AAS07440.1| 136|Homo sapiens unknown protein. 36 0.14
AC005057-1|AAS07439.1| 156|Homo sapiens unknown protein. 36 0.14
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 36 0.19
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 36 0.19
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 36 0.19
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 36 0.19
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 36 0.25
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 36 0.25
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 36 0.25
AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein. 35 0.43
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 34 0.76
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 34 0.76
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 34 0.76
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 34 0.76
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 34 0.76
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 34 0.76
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 34 0.76
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 34 0.76
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 34 0.76
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 34 0.76
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 34 0.76
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 34 0.76
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 34 0.76
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 34 0.76
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 34 0.76
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 34 0.76
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 34 0.76
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 34 0.76
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 34 0.76
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 34 0.76
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 34 0.76
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 34 0.76
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 34 0.76
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 34 0.76
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 33 1.0
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 33 1.0
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 33 1.0
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 33 1.0
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 33 1.0
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 33 1.0
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 33 1.0
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 33 1.0
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 33 1.0
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 33 1.3
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 33 1.3
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 33 1.7
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 33 1.7
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 33 1.7
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 33 1.7
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 33 1.7
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 33 1.7
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 33 1.7
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 33 1.7
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 32 2.3
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 32 2.3
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 32 2.3
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 32 2.3
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 32 2.3
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 32 2.3
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 32 2.3
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 32 2.3
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 32 2.3
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 32 3.1
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 32 3.1
U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous ribonucleop... 32 3.1
CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein. 32 3.1
BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear r... 32 3.1
BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear r... 32 3.1
BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear r... 32 3.1
BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear r... 32 3.1
BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear r... 32 3.1
BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear r... 32 3.1
BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear r... 32 3.1
BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear r... 32 3.1
BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear r... 32 3.1
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 32 3.1
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 32 3.1
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 31 4.0
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 31 5.3
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 31 5.3
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 31 5.3
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 31 5.3
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 31 5.3
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 31 5.3
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 31 5.3
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 31 5.3
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 31 5.3
BC012457-1|AAH12457.1| 227|Homo sapiens Similar to nucleolar pr... 31 5.3
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 31 7.1
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 31 7.1
U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein. 30 9.3
L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein. 30 9.3
BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein. 30 9.3
BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein. 30 9.3
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 183 bits (445), Expect = 8e-46
Identities = 102/243 (41%), Positives = 133/243 (54%), Gaps = 18/243 (7%)
Frame = +3
Query: 180 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 359
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 360 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 539
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 540 FKHT----------QIXXXXXX-----XXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 665
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 666 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 845
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRR 290
Query: 846 AXA 854
A
Sbjct: 291 EDA 293
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 183 bits (445), Expect = 8e-46
Identities = 102/243 (41%), Positives = 133/243 (54%), Gaps = 18/243 (7%)
Frame = +3
Query: 180 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 359
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 360 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 539
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 540 FKHT----------QIXXXXXX-----XXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 665
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 666 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 845
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRR 290
Query: 846 AXA 854
A
Sbjct: 291 EDA 293
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 183 bits (445), Expect = 8e-46
Identities = 102/243 (41%), Positives = 133/243 (54%), Gaps = 18/243 (7%)
Frame = +3
Query: 180 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 359
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 360 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 539
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 540 FKHT----------QIXXXXXX-----XXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 665
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 666 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 845
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRR 290
Query: 846 AXA 854
A
Sbjct: 291 EDA 293
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 183 bits (445), Expect = 8e-46
Identities = 102/243 (41%), Positives = 133/243 (54%), Gaps = 18/243 (7%)
Frame = +3
Query: 180 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 359
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 360 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 539
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 540 FKHT----------QIXXXXXX-----XXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 665
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 666 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 845
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRR 290
Query: 846 AXA 854
A
Sbjct: 291 EDA 293
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 183 bits (445), Expect = 8e-46
Identities = 102/243 (41%), Positives = 133/243 (54%), Gaps = 18/243 (7%)
Frame = +3
Query: 180 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 359
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 360 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 539
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 540 FKHT----------QIXXXXXX-----XXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 665
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 666 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 845
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRR 290
Query: 846 AXA 854
A
Sbjct: 291 EDA 293
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 183 bits (445), Expect = 8e-46
Identities = 102/243 (41%), Positives = 133/243 (54%), Gaps = 18/243 (7%)
Frame = +3
Query: 180 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 359
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 360 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 539
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 540 FKHT----------QIXXXXXX-----XXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 665
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 666 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 845
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRR 290
Query: 846 AXA 854
A
Sbjct: 291 EDA 293
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 183 bits (445), Expect = 8e-46
Identities = 102/243 (41%), Positives = 133/243 (54%), Gaps = 18/243 (7%)
Frame = +3
Query: 180 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 359
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 360 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 539
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 540 FKHT----------QIXXXXXX-----XXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 665
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 666 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 845
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRR 290
Query: 846 AXA 854
A
Sbjct: 291 EDA 293
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 182 bits (443), Expect = 1e-45
Identities = 101/240 (42%), Positives = 132/240 (55%), Gaps = 18/240 (7%)
Frame = +3
Query: 180 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 359
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 360 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 539
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 540 FKHT----------QIXXXXXX-----XXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 665
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 666 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 845
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRR 290
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 38.7 bits (86), Expect = 0.027
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 627 PPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PP +AG + + + D +I + N+ A +++ G G V+++ + +K +G
Sbjct: 152 PPGNAGPVIMSIEEKMEA-DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 210
Query: 807 HCKGFAYVHF 836
H KGFAY+ F
Sbjct: 211 HPKGFAYIEF 220
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 38.7 bits (86), Expect = 0.027
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 627 PPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PP +AG + + + D +I + N+ A +++ G G V+++ + +K +G
Sbjct: 152 PPGNAGPVIMSIEEKMEA-DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 210
Query: 807 HCKGFAYVHF 836
H KGFAY+ F
Sbjct: 211 HPKGFAYIEF 220
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 37.9 bits (84), Expect = 0.046
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 792 EKSTGHCKGFAYVHFK 839
++ TG +GFA+V+F+
Sbjct: 153 DQRTGRSRGFAFVYFE 168
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 37.9 bits (84), Expect = 0.046
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 792 EKSTGHCKGFAYVHFK 839
++ TG +GFA+V+F+
Sbjct: 153 DQRTGRSRGFAFVYFE 168
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 37.9 bits (84), Expect = 0.046
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 792 EKSTGHCKGFAYVHFK 839
++ TG +GFA+V+F+
Sbjct: 153 DQRTGRSRGFAFVYFE 168
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 37.9 bits (84), Expect = 0.046
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 792 EKSTGHCKGFAYVHFK 839
++ TG +GFA+V+F+
Sbjct: 153 DQRTGRSRGFAFVYFE 168
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 37.5 bits (83), Expect = 0.061
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 642 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 821
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 386 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 445
Query: 822 AYVHFKF 842
A++ F F
Sbjct: 446 AFITFMF 452
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 37.5 bits (83), Expect = 0.061
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 642 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 821
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 386 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 445
Query: 822 AYVHFKF 842
A++ F F
Sbjct: 446 AFITFMF 452
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 37.5 bits (83), Expect = 0.061
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 642 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 821
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 399 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 458
Query: 822 AYVHFKF 842
A++ F F
Sbjct: 459 AFITFMF 465
>D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein.
Length = 230
Score = 36.3 bits (80), Expect = 0.14
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 636 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 815
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 26 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 84
Query: 816 GFAYVHF 836
GF YV F
Sbjct: 85 GFCYVEF 91
>BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 36.3 bits (80), Expect = 0.14
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 636 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 815
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 816 GFAYVHF 836
GF YV F
Sbjct: 83 GFCYVEF 89
>BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 36.3 bits (80), Expect = 0.14
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 636 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 815
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 816 GFAYVHF 836
GF YV F
Sbjct: 83 GFCYVEF 89
>BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 36.3 bits (80), Expect = 0.14
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 636 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 815
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 816 GFAYVHF 836
GF YV F
Sbjct: 83 GFCYVEF 89
>AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein.
Length = 228
Score = 36.3 bits (80), Expect = 0.14
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 636 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 815
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 816 GFAYVHF 836
GF YV F
Sbjct: 83 GFCYVEF 89
>AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spliced
product protein.
Length = 248
Score = 36.3 bits (80), Expect = 0.14
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 636 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 815
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 816 GFAYVHF 836
GF YV F
Sbjct: 83 GFCYVEF 89
>AC005057-2|AAS07440.1| 136|Homo sapiens unknown protein.
Length = 136
Score = 36.3 bits (80), Expect = 0.14
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 636 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 815
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 816 GFAYVHF 836
GF YV F
Sbjct: 83 GFCYVEF 89
>AC005057-1|AAS07439.1| 156|Homo sapiens unknown protein.
Length = 156
Score = 36.3 bits (80), Expect = 0.14
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 636 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 815
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 816 GFAYVHF 836
GF YV F
Sbjct: 83 GFCYVEF 89
>BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 35.9 bits (79), Expect = 0.19
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 675 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE 94
>BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 35.9 bits (79), Expect = 0.19
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 675 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE 94
>AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein.
Length = 293
Score = 35.9 bits (79), Expect = 0.19
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 675 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE 94
>AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotein
Nopp34 protein.
Length = 293
Score = 35.9 bits (79), Expect = 0.19
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 675 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE 94
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 702 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
I L N+ + + +L+ FGP+ L K+ +TG KG+A+ +
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 702 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
I L N+ + + +L+ FGP+ L K+ +TG KG+A+ +
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 702 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
I L N+ + + +L+ FGP+ L K+ +TG KG+A+ +
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
>AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein.
Length = 704
Score = 34.7 bits (76), Expect = 0.43
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +3
Query: 702 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
I+N+ + ++LV+ +G + + +L + TGH KG+ +V +
Sbjct: 172 ITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEY 216
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 148 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 207
Query: 831 HFK 839
FK
Sbjct: 208 TFK 210
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 831 HFK 839
FK
Sbjct: 229 TFK 231
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 78 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 137
Query: 831 HFK 839
FK
Sbjct: 138 TFK 140
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 831 HFK 839
FK
Sbjct: 229 TFK 231
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 81 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 140
Query: 831 HFK 839
FK
Sbjct: 141 TFK 143
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 837 K 839
+
Sbjct: 122 E 122
>CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 837 K 839
+
Sbjct: 122 E 122
>BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 837 K 839
+
Sbjct: 122 E 122
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 831 HFK 839
FK
Sbjct: 229 TFK 231
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 831 HFK 839
FK
Sbjct: 229 TFK 231
>BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 837 K 839
+
Sbjct: 122 E 122
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 831 HFK 839
FK
Sbjct: 229 TFK 231
>AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 837 K 839
+
Sbjct: 122 E 122
>AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14
protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 837 K 839
+
Sbjct: 122 E 122
>AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif protein
8B protein.
Length = 158
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 46 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 105
Query: 837 K 839
+
Sbjct: 106 E 106
>AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif protein
8A protein.
Length = 173
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 61 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 120
Query: 837 K 839
+
Sbjct: 121 E 121
>AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif protein
8 protein.
Length = 173
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 61 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 120
Query: 837 K 839
+
Sbjct: 121 E 121
>AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein.
Length = 158
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 46 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 105
Query: 837 K 839
+
Sbjct: 106 E 106
>AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.76
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 660 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 837 K 839
+
Sbjct: 122 E 122
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 161 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 220
Query: 831 HFK 839
FK
Sbjct: 221 TFK 223
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 831 HFK 839
FK
Sbjct: 210 TFK 212
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 831 HFK 839
FK
Sbjct: 229 TFK 231
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 831 HFK 839
FK
Sbjct: 229 TFK 231
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 33.9 bits (74), Expect = 0.76
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 831 HFK 839
FK
Sbjct: 229 TFK 231
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 702 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
+ L A +++L GPV + ++ EK + C+GF YV F
Sbjct: 8 VGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTF 52
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 702 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
+ L A +++L GPV + ++ EK + C+GF YV F
Sbjct: 8 VGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTF 52
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 792 EKSTGHCKGFAYVHFK 839
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 792 EKSTGHCKGFAYVHFK 839
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 792 EKSTGHCKGFAYVHFK 839
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 792 EKSTGHCKGFAYVHFK 839
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 792 EKSTGHCKGFAYVHFK 839
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 59 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 115
Query: 792 EKSTGHCKGFAYVHFK 839
++ + +GFA+V+F+
Sbjct: 116 DQQSRRSRGFAFVYFE 131
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 792 EKSTGHCKGFAYVHFK 839
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 612 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 791
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 83 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 139
Query: 792 EKSTGHCKGFAYVHFK 839
++ + +GFA+V+F+
Sbjct: 140 DQQSRRSRGFAFVYFE 155
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 630 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 187 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 246
Query: 807 HCKGFAYVHFK 839
KG+ ++ ++
Sbjct: 247 KHKGYGFIEYE 257
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 630 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 205 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 264
Query: 807 HCKGFAYVHFK 839
KG+ ++ ++
Sbjct: 265 KHKGYGFIEYE 275
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 630 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 162 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 221
Query: 807 HCKGFAYVHFK 839
KG+ ++ ++
Sbjct: 222 KHKGYGFIEYE 232
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 630 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 162 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 221
Query: 807 HCKGFAYVHFK 839
KG+ ++ ++
Sbjct: 222 KHKGYGFIEYE 232
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 630 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 145 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 204
Query: 807 HCKGFAYVHFK 839
KG+ ++ ++
Sbjct: 205 KHKGYGFIEYE 215
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 630 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 188 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 247
Query: 807 HCKGFAYVHFK 839
KG+ ++ ++
Sbjct: 248 KHKGYGFIEYE 258
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 630 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 188 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 247
Query: 807 HCKGFAYVHFK 839
KG+ ++ ++
Sbjct: 248 KHKGYGFIEYE 258
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 630 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 202 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 261
Query: 807 HCKGFAYVHFK 839
KG+ ++ ++
Sbjct: 262 KHKGYGFIEYE 272
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 630 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 806
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 205 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 264
Query: 807 HCKGFAYVHFK 839
KG+ ++ ++
Sbjct: 265 KHKGYGFIEYE 275
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 699 RISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRAXA 854
R+ N+ A E + D+ GPV L ++ TG KG+ + ++ + A
Sbjct: 10 RVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETA 61
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +3
Query: 651 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 830
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 159 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 218
Query: 831 HF 836
F
Sbjct: 219 TF 220
>U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 702 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
+ L A + +L GPV + ++ EK + C+GF YV F
Sbjct: 8 VGRLPPSARSEQLGELFSQVGPVKQCFVVTEKGSKACRGFGYVTF 52
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 31.9 bits (69), Expect = 3.1
Identities = 11/46 (23%), Positives = 27/46 (58%)
Frame = +3
Query: 702 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 839
+ LS + E D+ ++ +GP+ + + ++ + +GFA+V+F+
Sbjct: 22 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 67
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 31.5 bits (68), Expect = 4.0
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 702 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRAXA 854
+SNL +ADI +L FG + K + ++S G G A VHF+ +A A
Sbjct: 86 VSNLDFGVSDADIQELFAEFGTLKKAAVHYDRS-GRSLGTANVHFERKADA 135
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 848
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 849 XA 854
A
Sbjct: 69 TA 70
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 848
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 849 XA 854
A
Sbjct: 69 TA 70
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 630 PSSAGRIPGRDQPPVRR--EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKST 803
P + R RDQ + ED + + LS + D+ D FG V + + +T
Sbjct: 46 PRAGIRTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNT 105
Query: 804 GHCKGFAYVHFK 839
G +GF ++ FK
Sbjct: 106 GRSRGFGFILFK 117
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 848
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 849 XA 854
A
Sbjct: 69 TA 70
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 630 PSSAGRIPGRDQPPVRR--EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKST 803
P + R RDQ + ED + + LS + D+ D FG V + + +T
Sbjct: 46 PRAGIRTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNT 105
Query: 804 GHCKGFAYVHFK 839
G +GF ++ FK
Sbjct: 106 GRSRGFGFILFK 117
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 848
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 849 XA 854
A
Sbjct: 69 TA 70
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 702 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRAXA 854
+SNL +ADI +L FG + K + ++S G G A VHF+ +A A
Sbjct: 110 VSNLDFGVSDADIQELFAEFGTLKKAAVHYDRS-GRSLGTADVHFERKADA 159
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 848
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 8 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 67
Query: 849 XA 854
A
Sbjct: 68 TA 69
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 669 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 848
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 849 XA 854
A
Sbjct: 69 TA 70
>BC012457-1|AAH12457.1| 227|Homo sapiens Similar to nucleolar
protein interacting with the FHA domain of pKi-67
protein.
Length = 227
Score = 31.1 bits (67), Expect = 5.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 759 FGPVHKLYLAKEKSTGHCKGFAYVHFK 839
FG V + L++ K TG+ KG+A+V F+
Sbjct: 2 FGTVTRFRLSRSKRTGNSKGYAFVEFE 28
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 30.7 bits (66), Expect = 7.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E ++D FGP+ ++ + K++ T +GF ++ F
Sbjct: 19 EQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITF 54
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 30.7 bits (66), Expect = 7.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 729 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 836
E ++D FGP+ ++ + K++ T +GF ++ F
Sbjct: 19 EQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITF 54
>U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 548 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 429
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 548 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 429
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 548 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 429
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 548 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 429
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,548,521
Number of Sequences: 237096
Number of extensions: 2220271
Number of successful extensions: 5815
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 5472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5807
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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