Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_P17
         (346 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0025 - 25165438-25165708,25165807-25166048,25166191-251662...    50   5e-07
12_01_0284 + 2117288-2117509                                           50   6e-07
11_01_0276 + 2057486-2057707                                           50   6e-07
05_04_0267 - 19570478-19571122                                         27   3.0  

>02_05_0025 -
           25165438-25165708,25165807-25166048,25166191-25166222,
           25167174-25167231,25167331-25167438
          Length = 236

 Score = 50.0 bits (114), Expect = 5e-07
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = -3

Query: 191 RRFELNAXPDDTVGDLKKLIAAQTGTRYDKIVLKKW 84
           ++  +    DDT+GDLKKL+AAQTGTR +KI ++KW
Sbjct: 175 KKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKW 210



 Score = 40.3 bits (90), Expect = 4e-04
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -1

Query: 70  KDHIKLADYEIHDGMNLEL 14
           KDHI LADYEIHDGM LEL
Sbjct: 215 KDHITLADYEIHDGMGLEL 233



 Score = 36.7 bits (81), Expect = 0.005
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = -2

Query: 231 SKMLEVTCNDRLGKKVRVKC 172
           ++M+EV  NDRLGKKVRVKC
Sbjct: 162 AEMIEVVLNDRLGKKVRVKC 181


>12_01_0284 + 2117288-2117509
          Length = 73

 Score = 49.6 bits (113), Expect = 6e-07
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = -3

Query: 191 RRFELNAXPDDTVGDLKKLIAAQTGTRYDKIVLKKW 84
           ++  +    DDT+GDLKKL+AAQTGTR +KI ++KW
Sbjct: 12  KKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKW 47



 Score = 39.5 bits (88), Expect = 7e-04
 Identities = 17/22 (77%), Positives = 17/22 (77%)
 Frame = -1

Query: 70  KDHIKLADYEIHDGMNLELTIN 5
           KDHI L DYEIHDGM LEL  N
Sbjct: 52  KDHITLRDYEIHDGMGLELYYN 73



 Score = 35.9 bits (79), Expect = 0.009
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 225 MLEVTCNDRLGKKVRVKC 172
           M+EV  NDRLGKKVRVKC
Sbjct: 1   MIEVVLNDRLGKKVRVKC 18


>11_01_0276 + 2057486-2057707
          Length = 73

 Score = 49.6 bits (113), Expect = 6e-07
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = -3

Query: 191 RRFELNAXPDDTVGDLKKLIAAQTGTRYDKIVLKKW 84
           ++  +    DDT+GDLKKL+AAQTGTR +KI ++KW
Sbjct: 12  KKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKW 47



 Score = 39.5 bits (88), Expect = 7e-04
 Identities = 17/22 (77%), Positives = 17/22 (77%)
 Frame = -1

Query: 70  KDHIKLADYEIHDGMNLELTIN 5
           KDHI L DYEIHDGM LEL  N
Sbjct: 52  KDHITLKDYEIHDGMGLELYYN 73



 Score = 35.9 bits (79), Expect = 0.009
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 225 MLEVTCNDRLGKKVRVKC 172
           M+EV  NDRLGKKVRVKC
Sbjct: 1   MIEVVLNDRLGKKVRVKC 18


>05_04_0267 - 19570478-19571122
          Length = 214

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 137 TSLNHPRYRQGLHLTRTFLPSRSLHVTSSILLSNQLSVLLR 259
           T  +HPR     + +    P R+  VTSS+L+ N+  V  R
Sbjct: 77  TEKDHPRSLMHRNFSEATPPRRTRRVTSSLLVRNRNKVFTR 117


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,609,766
Number of Sequences: 37544
Number of extensions: 97019
Number of successful extensions: 179
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)