Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_P17
         (346 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007355-1|AAP36019.1|   73|Homo sapiens ubiquitin-like 5 protein.     58   6e-09
BC110839-1|AAI10840.1|   73|Homo sapiens ubiquitin-like 5 protein.     58   6e-09
BC007053-1|AAH07053.1|   73|Homo sapiens UBL5 protein protein.         58   6e-09
AF313915-1|AAK14178.1|   73|Homo sapiens ubiquitin-like 5 protei...    58   6e-09
D13636-1|BAA02800.1|  911|Homo sapiens KIAA0011 protein.               28   6.8  
BT009799-1|AAP88801.1|  911|Homo sapiens general transcription f...    28   6.8  
BC020981-1|AAH20981.1|  911|Homo sapiens general transcription f...    28   6.8  
AF054988-1|AAC09349.1|  292|Homo sapiens unknown protein.              28   6.8  
AC013413-7|AAY24299.1|  377|Homo sapiens unknown protein.              28   6.8  

>BT007355-1|AAP36019.1|   73|Homo sapiens ubiquitin-like 5 protein.
          Length = 73

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = -3

Query: 191 RRFELNAXPDDTVGDLKKLIAAQTGTRYDKIVLKKWXT 78
           ++  +    DDT+GDLKKLIAAQTGTR++KIVLKKW T
Sbjct: 12  KKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYT 49



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -1

Query: 70  KDHIKLADYEIHDGMNLEL 14
           KDH+ L DYEIHDGMNLEL
Sbjct: 52  KDHVSLGDYEIHDGMNLEL 70



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -2

Query: 225 MLEVTCNDRLGKKVRVKC 172
           M+EV CNDRLGKKVRVKC
Sbjct: 1   MIEVVCNDRLGKKVRVKC 18


>BC110839-1|AAI10840.1|   73|Homo sapiens ubiquitin-like 5 protein.
          Length = 73

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = -3

Query: 191 RRFELNAXPDDTVGDLKKLIAAQTGTRYDKIVLKKWXT 78
           ++  +    DDT+GDLKKLIAAQTGTR++KIVLKKW T
Sbjct: 12  KKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYT 49



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -1

Query: 70  KDHIKLADYEIHDGMNLEL 14
           KDH+ L DYEIHDGMNLEL
Sbjct: 52  KDHVSLGDYEIHDGMNLEL 70



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -2

Query: 225 MLEVTCNDRLGKKVRVKC 172
           M+EV CNDRLGKKVRVKC
Sbjct: 1   MIEVVCNDRLGKKVRVKC 18


>BC007053-1|AAH07053.1|   73|Homo sapiens UBL5 protein protein.
          Length = 73

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = -3

Query: 191 RRFELNAXPDDTVGDLKKLIAAQTGTRYDKIVLKKWXT 78
           ++  +    DDT+GDLKKLIAAQTGTR++KIVLKKW T
Sbjct: 12  KKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYT 49



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -1

Query: 70  KDHIKLADYEIHDGMNLEL 14
           KDH+ L DYEIHDGMNLEL
Sbjct: 52  KDHVSLGDYEIHDGMNLEL 70



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -2

Query: 225 MLEVTCNDRLGKKVRVKC 172
           M+EV CNDRLGKKVRVKC
Sbjct: 1   MIEVVCNDRLGKKVRVKC 18


>AF313915-1|AAK14178.1|   73|Homo sapiens ubiquitin-like 5 protein
           protein.
          Length = 73

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = -3

Query: 191 RRFELNAXPDDTVGDLKKLIAAQTGTRYDKIVLKKWXT 78
           ++  +    DDT+GDLKKLIAAQTGTR++KIVLKKW T
Sbjct: 12  KKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYT 49



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -1

Query: 70  KDHIKLADYEIHDGMNLEL 14
           KDH+ L DYEIHDGMNLEL
Sbjct: 52  KDHVSLGDYEIHDGMNLEL 70



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -2

Query: 225 MLEVTCNDRLGKKVRVKC 172
           M+EV CNDRLGKKVRVKC
Sbjct: 1   MIEVVCNDRLGKKVRVKC 18


>D13636-1|BAA02800.1|  911|Homo sapiens KIAA0011 protein.
          Length = 911

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 40  FHSLQV*YDPXNXVXHFLSTILSYLVP 120
           F  L+  Y+P N +  FLST L++L+P
Sbjct: 640 FWDLRRPYEPINSIKRFLSTELAWLLP 666


>BT009799-1|AAP88801.1|  911|Homo sapiens general transcription
           factor IIIC, polypeptide 2, beta 110kDa protein.
          Length = 911

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 40  FHSLQV*YDPXNXVXHFLSTILSYLVP 120
           F  L+  Y+P N +  FLST L++L+P
Sbjct: 640 FWDLRRPYEPINSIKRFLSTELAWLLP 666


>BC020981-1|AAH20981.1|  911|Homo sapiens general transcription
           factor IIIC, polypeptide 2, beta 110kDa protein.
          Length = 911

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 40  FHSLQV*YDPXNXVXHFLSTILSYLVP 120
           F  L+  Y+P N +  FLST L++L+P
Sbjct: 640 FWDLRRPYEPINSIKRFLSTELAWLLP 666


>AF054988-1|AAC09349.1|  292|Homo sapiens unknown protein.
          Length = 292

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 40  FHSLQV*YDPXNXVXHFLSTILSYLVP 120
           F  L+  Y+P N +  FLST L++L+P
Sbjct: 21  FWDLRRPYEPINSIKRFLSTELAWLLP 47


>AC013413-7|AAY24299.1|  377|Homo sapiens unknown protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 40  FHSLQV*YDPXNXVXHFLSTILSYLVP 120
           F  L+  Y+P N +  FLST L++L+P
Sbjct: 106 FWDLRRPYEPINSIKRFLSTELAWLLP 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,737,706
Number of Sequences: 237096
Number of extensions: 551130
Number of successful extensions: 675
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)