Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_P16
(302 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 124 2e-29
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 123 2e-29
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 82 7e-17
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 35 0.014
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 31 0.23
11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610 28 1.2
05_03_0629 + 16376575-16376689,16376792-16376839,16376927-163770... 27 2.1
06_03_1067 - 27326167-27326295,27326572-27326656,27326993-273270... 27 2.8
12_01_0328 + 2535049-2535213,2536611-2537777 26 6.5
03_02_0739 + 10834581-10835927 26 6.5
10_01_0253 + 2661264-2661872,2662055-2662875,2662959-2663340 25 8.6
06_01_0485 - 3444240-3444398,3444507-3444572,3444644-3444724,344... 25 8.6
05_07_0280 - 28920864-28920971,28921076-28921175,28921267-289213... 25 8.6
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731... 25 8.6
01_06_0338 + 28538951-28538966,28539073-28539183,28539311-285394... 25 8.6
01_01_1106 + 8750597-8754031 25 8.6
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 124 bits (298), Expect = 2e-29
Identities = 54/86 (62%), Positives = 72/86 (83%)
Frame = -1
Query: 290 LPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNER 111
LPALCRKM VPYCIVKGK+RLG++VH+KT + L LT V++ D+ FSK++EAIK NFN++
Sbjct: 162 LPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDK 221
Query: 110 YEELRKHWGGGVLGNKSNARIAKLRE 33
++E+RK WGGGV+G+KS A+ K RE
Sbjct: 222 FDEVRKKWGGGVMGSKSQAK-TKARE 246
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 123 bits (297), Expect = 2e-29
Identities = 52/86 (60%), Positives = 73/86 (84%)
Frame = -1
Query: 290 LPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNER 111
LPALCRKM +PYCIVKGK+RLG++VH+KT + L LT V++ D+ FSK++EAIK+NFN++
Sbjct: 147 LPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKSNFNDK 206
Query: 110 YEELRKHWGGGVLGNKSNARIAKLRE 33
++E+RK WGGG++G+KS A+ K RE
Sbjct: 207 FDEVRKKWGGGIMGSKSQAK-TKARE 231
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 82.2 bits (194), Expect = 7e-17
Identities = 42/86 (48%), Positives = 58/86 (67%)
Frame = -1
Query: 290 LPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNER 111
LPALCRKM +VH+KT + L LT V++ D+ FSK++EAIK NFN++
Sbjct: 146 LPALCRKM--------------EIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDK 191
Query: 110 YEELRKHWGGGVLGNKSNARIAKLRE 33
++E+RK WGGGV+G+KS A+ K RE
Sbjct: 192 FDEVRKKWGGGVMGSKSQAK-TKARE 216
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 34.7 bits (76), Expect = 0.014
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -1
Query: 290 LPALCRKMGVPYCIVKGKSRL--GALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFN 117
+P LC + +PY V K L R TC L LT G+ V E +KT+++
Sbjct: 79 VPILCEEANIPYVYVPSKEDLATAGTTKRPTCCVLVLTKPAKGELE--EDVKEKLKTDYD 136
Query: 116 ERYEELRKHWGG 81
+ E+ + G
Sbjct: 137 QVMSEVAEAGNG 148
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 30.7 bits (66), Expect = 0.23
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = -1
Query: 290 LPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNER 111
+P LC + +PY V K L K TC L + +V E +K++++
Sbjct: 79 VPILCEEANIPYIYVPSKEDLATAGTTKRPTCCVLVMTKPAKGEINEEVKEKLKSDYDHV 138
Query: 110 YEEL 99
E+
Sbjct: 139 VAEV 142
>11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610
Length = 439
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +1
Query: 55 ALDLLPRTPPPQCLRSSS*RSLKFVLMASTTFEKEARSPDSTFVRAKHVHVLRCTSAPRR 234
A LL PP + S R ++ + + R P+ + A +R T
Sbjct: 18 AASLLSLPPPSLAVTSPYVRPKPRATLSLLKDDDDGRKPEQVHISAVGSDKMRVTWITGG 77
Query: 235 DLPLTMQYGT 264
D P T++YGT
Sbjct: 78 DAPATVEYGT 87
>05_03_0629 +
16376575-16376689,16376792-16376839,16376927-16377012,
16377791-16377878,16378387-16378472,16378604-16378690,
16379111-16379293,16379387-16379470,16379590-16379651,
16379752-16379827,16379906-16379968,16380060-16380141,
16380840-16380916,16381502-16381549,16381681-16381743
Length = 415
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 73 RTPPPQCLRSSS*RSLKFVLMASTTFEKEARSPD 174
R+PPP LR + R + V A T E +A +P+
Sbjct: 28 RSPPPSSLRLNRRRHFQVVRAAETDKETKANAPE 61
>06_03_1067 - 27326167-27326295,27326572-27326656,27326993-27327033,
27327274-27327333,27327843-27327962,27328842-27329114,
27329186-27329257,27329798-27329860,27329957-27330139,
27330544-27330660,27330734-27332683,27332770-27332907,
27333003-27333284,27334650-27335522
Length = 1461
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 160 ARSPDSTFVRAKHVHVLRCTSAPRRDLPLTMQYGTPIL 273
+R P + + H H C + RRD+PL + +P++
Sbjct: 945 SRRPSRSEFKGGHDHRSPCVPSNRRDIPLVRRPPSPVV 982
>12_01_0328 + 2535049-2535213,2536611-2537777
Length = 443
Score = 25.8 bits (54), Expect = 6.5
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 67 LPRTPPPQCLRSSS*RSLKFVLMA--STTFEKEARSPDSTFVRAKHVHVLRCTSAPRRDL 240
+P PPP + + ++ A S + + R+P + A +R T D
Sbjct: 17 VPLLPPPAASLAVTSTYVRPTARATLSVLHDGDGRTPQQVHISAVGSDKMRVTWITDDDA 76
Query: 241 PLTMQYGT 264
P T++YGT
Sbjct: 77 PATVEYGT 84
>03_02_0739 + 10834581-10835927
Length = 448
Score = 25.8 bits (54), Expect = 6.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 297 EFPASVMP*NGRTILHCQGQVPPRCTCTPQDMHML 193
EFPA V P +L G P RC P H+L
Sbjct: 130 EFPARVAPAGRPRVLVVTGSAPARCP-DPDGDHLL 163
>10_01_0253 + 2661264-2661872,2662055-2662875,2662959-2663340
Length = 603
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 157 EARSPDSTFVRAKHVHVLRC 216
E+ + D +F+RA VH LRC
Sbjct: 459 ESTNGDPSFIRATLVHFLRC 478
>06_01_0485 -
3444240-3444398,3444507-3444572,3444644-3444724,
3444823-3444900,3444980-3445075,3445363-3445405,
3445498-3445571,3445693-3445781,3445887-3445935,
3446171-3446227,3446309-3446425,3448633-3448698,
3449140-3449196,3449271-3449363,3449515-3449662,
3449753-3449902,3449979-3450181,3450319-3450438,
3450530-3450694,3450784-3450870,3450951-3451100,
3451225-3451365,3451399-3451569,3452015-3452091,
3452175-3452415,3452495-3452758,3452913-3453000,
3453099-3453481
Length = 1170
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 209 KTCTCLALTNVESGDRASFSKVVEAIKTNFNER 111
K +A++N+ + SFS+ ++ + +FNER
Sbjct: 107 KLAARIAVSNLHKNTKKSFSETIKDMYGHFNER 139
>05_07_0280 -
28920864-28920971,28921076-28921175,28921267-28921394,
28922013-28922180,28922280-28922395,28922584-28922736,
28922904-28923047,28923401-28924133
Length = 549
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 191 ALTNVESGDRASFSKVVEAIKTNFNER--YEELRKHWGGGVL 72
ALT + GD A+ +++ + T+ + R Y E ++ GG ++
Sbjct: 491 ALTKYDMGDEATIKEIIAEVDTDHDNRIDYIEYLENIGGDLV 532
>03_02_0917 +
12372122-12372422,12372487-12372524,12373103-12373186,
12373796-12374504,12374641-12374729,12374834-12374903,
12374977-12375060,12375097-12375239,12375337-12375418,
12375605-12375687,12375769-12375835,12376287-12376376,
12377631-12377737,12377862-12377969
Length = 684
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 270 NGRTILHCQGQVPPRCTCTP 211
NG+TI C +V C C P
Sbjct: 553 NGKTISACSNEVSEGCKCPP 572
>01_06_0338 +
28538951-28538966,28539073-28539183,28539311-28539479,
28540841-28541063,28541148-28541204,28541718-28541861,
28541939-28542019,28543026-28543113,28543579-28543943,
28544011-28544086,28544174-28544367,28544846-28545009,
28545080-28545152,28545237-28545350,28545839-28545919,
28546043-28546102,28546180-28546289,28546325-28546501,
28546599-28546683
Length = 795
Score = 25.4 bits (53), Expect = 8.6
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -1
Query: 242 GKSRLG---ALVHRKTCTCLALTNVESGDRASFS-KVVEAIKTNFNERYEELRKHWGGGV 75
GKS +G A +K+C CLA TN S D+ +F K+ IK R+ K G+
Sbjct: 311 GKSLVGVSAACRIKKSCLCLA-TNAVSVDQWAFQFKLWSTIKDEHISRFTSDNKEKFRGM 369
Query: 74 LG 69
G
Sbjct: 370 AG 371
>01_01_1106 + 8750597-8754031
Length = 1144
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 240 QVPPRCTCTPQDMHMLSSNKCGV 172
++ P C+ Q++H L+ ++CGV
Sbjct: 555 EILPDTICSLQNLHFLNLSRCGV 577
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,127,935
Number of Sequences: 37544
Number of extensions: 130118
Number of successful extensions: 472
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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