Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_P15
(818 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1073 - 33895608-33895880,33896133-33896180,33896273-338965... 40 0.002
08_01_0404 - 3590296-3590409,3590529-3590819,3592414-3592461,359... 37 0.022
12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776 36 0.039
06_03_0843 + 25315089-25315417,25317274-25317310,25317439-253176... 33 0.27
12_01_1059 - 10934937-10935446,10938224-10938271,10938383-109386... 33 0.36
04_03_0160 + 12099120-12099753,12099879-12099958 33 0.36
08_01_0051 - 355392-355450,355507-355634,356271-356425,356883-35... 32 0.48
01_01_1078 + 8489872-8490168,8490280-8490462,8490667-8490908,849... 32 0.48
08_02_1406 - 26854845-26855606 31 1.1
01_01_1077 + 8485655-8486134,8486423-8486554,8487725-8487966,848... 31 1.1
03_06_0541 - 34607071-34607353,34608167-34608399,34609093-346092... 29 3.4
08_01_0463 - 4075037-4075316,4075997-4076151,4076818-4078861,408... 29 5.9
11_01_0716 + 5900598-5901167 28 7.8
04_04_0686 - 27249140-27249220,27249387-27249480,27249922-272499... 28 7.8
04_04_0243 - 23858975-23860706,23861178-23861230,23861338-238615... 28 7.8
03_06_0217 - 32432590-32433495 28 7.8
>02_05_1073 -
33895608-33895880,33896133-33896180,33896273-33896509,
33897233-33897269,33898603-33898913
Length = 301
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = -1
Query: 803 IAFDYRGYGDSTNLCPXEEGVVEDALVVYDWLXATADKGGETPPVFVWGHSLGTAISAHL 624
+++DY GYG ST P E D VYD L T G E + ++G S+G+ + HL
Sbjct: 103 MSYDYSGYGASTGK-PSEYNTYCDIEAVYDCL--TKVYGIEPEDLILYGQSVGSGPTLHL 159
Query: 623 LGNLEQL 603
LE+L
Sbjct: 160 ASRLEKL 166
>08_01_0404 -
3590296-3590409,3590529-3590819,3592414-3592461,
3592559-3592795,3593668-3593704,3594311-3594627
Length = 347
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = -1
Query: 803 IAFDYRGYGDSTNLCPXEEGVVEDALVVYDWLXATADKGGETPPVFVWGHSLGTAISAHL 624
+ +DY GYG ST P EE D VY L + G + ++G S+G+ + HL
Sbjct: 105 MGYDYSGYGASTGK-PSEENTYADIEAVYQCL--ETEYGISQEDLILYGQSVGSGPTLHL 161
Query: 623 LGNLEQL 603
L +L
Sbjct: 162 ASRLPRL 168
>12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776
Length = 320
Score = 35.9 bits (79), Expect = 0.039
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -1
Query: 812 FHTIAFDYRGYGDSTNLCPXEEGVVEDALVVYDWLXATADKGGETPPVFVWGHSLGTAIS 633
F +A D RGYGDST P + +V D L A D P V V GH LG ++
Sbjct: 56 FRALAPDLRGYGDST--VPDDPAAYTVFHIVGD-LVALLDHLA-LPKVMVVGHDLGAQVA 111
Query: 632 AHLLGNLEQLSLRVLDRVLP-PPRG 561
HL + L V++ +P PRG
Sbjct: 112 WHLCLFRPDMLLAVVNLGVPFFPRG 136
>06_03_0843 +
25315089-25315417,25317274-25317310,25317439-25317675,
25317745-25317792,25318144-25318577,25318675-25318759
Length = 389
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = -1
Query: 818 MDFHTIAFDYRGYGDSTNLCPXEEGVVEDALVVYDWLXATADKGGETPPVFVWGHSLGTA 639
++ + + +DY GYG S+ P E+ D Y L T G + ++G S+G+
Sbjct: 104 LNVNLMGYDYSGYGQSSGK-PSEQNTYSDIEAAYRCLVET--YGATEENIILYGQSVGSG 160
Query: 638 ISAHLLGNLEQLSLRVL 588
+ L L L VL
Sbjct: 161 PTLDLASRLPHLRAVVL 177
>12_01_1059 -
10934937-10935446,10938224-10938271,10938383-10938619,
10938711-10938747,10941018-10941286
Length = 366
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = -1
Query: 809 HTIAFDYRGYGDSTNLCPXEEGVVEDALVVYDWLXATADKGGETPPVFVWGHSLGTAISA 630
+ + +DY GYG S+ P E D Y L + G + + ++G S+G+ +
Sbjct: 87 NVLGYDYSGYGQSSGK-PSEHNTYADIEAAYKCL--IENFGAKEEEIILYGQSVGSGPTV 143
Query: 629 HLLGNLEQLSLRVL 588
L L +L VL
Sbjct: 144 DLASRLHRLRAVVL 157
>04_03_0160 + 12099120-12099753,12099879-12099958
Length = 237
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 334 SPTAKGTTTSSLACSISTGSPGAPPRCLSDWNLCS 438
SPT+ +++S+L + + GSP AP + W +CS
Sbjct: 176 SPTSATSSSSTLGGTSNPGSPVAPSSFMDSWKICS 210
>08_01_0051 -
355392-355450,355507-355634,356271-356425,356883-357012,
357600-357739,358384-358552,360286-360557
Length = 350
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 656 HSLGTAISAHLLGNLEQLSLRVLDRVLPPPRGLVLEAPFNNL 531
H + +A A GNL +LS+ +L+ +L P G++L FN +
Sbjct: 242 HVMDSAKQATKSGNLNELSMVLLNNILSVPLGIILVLGFNEV 283
>01_01_1078 +
8489872-8490168,8490280-8490462,8490667-8490908,
8490988-8491240
Length = 324
Score = 32.3 bits (70), Expect = 0.48
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = -1
Query: 812 FHTIAFDYRGYGDSTNLCPXEEGVVEDALVVYDWLXATADKGGETPPVFVWGHSLGTAIS 633
F +A D RGYGDS P +V D + AD G P VFV GH G ++
Sbjct: 57 FRAVAPDLRGYGDSD--APQGRDSYTVLHLVGDLVALIADLG--RPQVFVAGHDWGAVVA 112
Query: 632 AHL 624
L
Sbjct: 113 WQL 115
>08_02_1406 - 26854845-26855606
Length = 253
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +1
Query: 331 WSPTAKGTTTSSLACSISTGSPGAPPRCLSDWNLCSGWTLKGSTKVA-S*YGSHVTSLDR 507
WS + S L + + G G PP C +C G G +A + G + L R
Sbjct: 176 WSYQCQTCPDSELCLACALGRDGVPPCCCCGQCVCGGGCFVGCAGLAGNAMGHFIHELFR 235
Query: 508 GCFATS 525
GC S
Sbjct: 236 GCTGLS 241
>01_01_1077 +
8485655-8486134,8486423-8486554,8487725-8487966,
8488254-8488500
Length = 366
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = -1
Query: 812 FHTIAFDYRGYGDSTNLCPXEEGVVEDALVVYDWLXATADKGGETPPVFVWGHSLGTAIS 633
F +A D RGYGDS P +V D + AD G P VFV H G A++
Sbjct: 57 FRAVAPDLRGYGDSD--APPGRDSYTVLHLVGDLVALIADVG--QPRVFVAAHDWGAAVA 112
Query: 632 AHL 624
L
Sbjct: 113 WQL 115
>03_06_0541 -
34607071-34607353,34608167-34608399,34609093-34609275,
34609357-34609659
Length = 333
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/63 (38%), Positives = 30/63 (47%)
Frame = -1
Query: 812 FHTIAFDYRGYGDSTNLCPXEEGVVEDALVVYDWLXATADKGGETPPVFVWGHSLGTAIS 633
+ +A D RGYG +T P E +V D L A D E P VFV GH G +S
Sbjct: 59 YRCVAPDLRGYGGTT--APPEHTSYTIFHLVGD-LVALLD-ALELPQVFVVGHDWGAIVS 114
Query: 632 AHL 624
+L
Sbjct: 115 WNL 117
>08_01_0463 -
4075037-4075316,4075997-4076151,4076818-4078861,
4080757-4081589
Length = 1103
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -1
Query: 410 LGGAPGLPVLILHARDDVVVPFAVGLQLYKSILSSRSQGGATVALHAYEKSENLGHKWIC 231
+G L VL L +P +VGL +LS R+ G V+ + K +L WIC
Sbjct: 638 VGDLKFLQVLDLSGTGIQELPESVGL--LTKLLSLRANEGTRVSAGSIVKLTSLQEMWIC 695
Query: 230 EAKDLTQVI 204
A D++Q +
Sbjct: 696 PA-DISQFV 703
>11_01_0716 + 5900598-5901167
Length = 189
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 648 GNGDIGAPPRQLGAALA 598
GNGD G+PPRQ G +A
Sbjct: 68 GNGDDGSPPRQFGDIVA 84
>04_04_0686 -
27249140-27249220,27249387-27249480,27249922-27249987,
27250068-27250158,27250378-27250460,27250565-27250633,
27250971-27251038,27251118-27251204,27252998-27253069,
27253469-27253527,27253663-27253780,27254411-27254466,
27254892-27254937,27255011-27255052,27255837-27255922,
27256039-27256087
Length = 388
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 633 RYRRSQRVSPYEYRRRLPTLVCSGXKPVVXDQCVFHNALLXRTQVR-GVPIXSVIKSDGV 809
RY + +++S EY+ R T + + + + +C+F R +++ +P+ S++K V
Sbjct: 309 RYSKEEKISIEEYQERNFTYLLNEHRHISGYKCLFAVDGFSRAKIQPRIPLLSLVKEPKV 368
Query: 810 EIH 818
H
Sbjct: 369 FAH 371
>04_04_0243 -
23858975-23860706,23861178-23861230,23861338-23861538,
23861649-23861990,23862277-23862423,23862945-23863086,
23863876-23863959,23864772-23864779
Length = 902
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -1
Query: 413 HLGGAPG-LPVLILHARDDVVVPFAVGLQLYKSILSSRSQGGATVALH 273
HL GAP LP L+L A V P A L+LY S + S S +T +LH
Sbjct: 416 HLDGAPSSLPNLLLTA-SAAVRPHATSLRLY-SRMKSLSLPISTASLH 461
>03_06_0217 - 32432590-32433495
Length = 301
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 292 PPCEREDSIDLYNWSPTAKGTTTSSLACSISTGS 393
P R+D ID+ NW + G T S+ A + S S
Sbjct: 239 PGAGRDDMIDMLNWRRGSHGPTASAAATTPSPAS 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,565,100
Number of Sequences: 37544
Number of extensions: 479428
Number of successful extensions: 1714
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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