Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_P14
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 287 6e-78
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 287 6e-78
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 287 6e-78
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 287 6e-78
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 287 6e-78
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 287 6e-78
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 286 1e-77
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 286 1e-77
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 286 1e-77
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 280 7e-76
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 272 1e-73
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 149 2e-36
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 128 3e-30
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 9e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 2e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 75 3e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 75 3e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 287 bits (703), Expect = 6e-78
Identities = 131/139 (94%), Positives = 136/139 (97%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 287 bits (703), Expect = 6e-78
Identities = 131/139 (94%), Positives = 136/139 (97%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 287 bits (703), Expect = 6e-78
Identities = 131/139 (94%), Positives = 136/139 (97%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 287 bits (703), Expect = 6e-78
Identities = 131/139 (94%), Positives = 136/139 (97%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 194 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 253
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 254 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 313
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 314 ISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 287 bits (703), Expect = 6e-78
Identities = 131/139 (94%), Positives = 136/139 (97%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 224 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 283
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 284 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 343
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 344 ISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 287 bits (703), Expect = 6e-78
Identities = 131/139 (94%), Positives = 136/139 (97%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 286 bits (701), Expect = 1e-77
Identities = 130/139 (93%), Positives = 136/139 (97%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 286 bits (701), Expect = 1e-77
Identities = 130/139 (93%), Positives = 136/139 (97%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 286 bits (701), Expect = 1e-77
Identities = 130/139 (93%), Positives = 136/139 (97%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 280 bits (686), Expect = 7e-76
Identities = 129/139 (92%), Positives = 135/139 (97%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGTTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 356
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 357 ISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 272 bits (668), Expect = 1e-73
Identities = 124/139 (89%), Positives = 131/139 (94%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
EKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYAN
Sbjct: 237 EKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYAN 296
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
TV+SGGT+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 297 TVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 356
Query: 304 ISKEEYDESGPGIVHRKCF 248
ISK+EYDESGP IVHRKCF
Sbjct: 357 ISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 149 bits (361), Expect = 2e-36
Identities = 68/139 (48%), Positives = 93/139 (66%)
Frame = -3
Query: 664 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 485
+ SY LPD I I N FR PE LF+P +G E G+ V SIMKCDVD+R+ LY+N
Sbjct: 236 KSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSN 295
Query: 484 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 305
V+SGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW
Sbjct: 296 IVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMW 355
Query: 304 ISKEEYDESGPGIVHRKCF 248
+ K+EY++ G +H++ F
Sbjct: 356 LGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 128 bits (310), Expect = 3e-30
Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 13/142 (9%)
Frame = -3
Query: 661 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 482
+ Y LPDG+VI +G ERF PE LFQP + +E G+ E ++ I D+D R D Y +
Sbjct: 242 QQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHI 301
Query: 481 VMSGGTTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWIGGSIL 335
V+SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++L
Sbjct: 302 VLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVL 361
Query: 334 ASL--STFQQMWISKEEYDESG 275
A+L Q W+SK+EY+E G
Sbjct: 362 ANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (289), Expect = 9e-28
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Frame = -3
Query: 655 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 491
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 490 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 320
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 319 FQQMWISKEEYDESGPGIVHRKC 251
FQQMW+SK EYDESG IV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 100 bits (239), Expect = 1e-21
Identities = 40/112 (35%), Positives = 75/112 (66%)
Frame = -3
Query: 625 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 446
I N RF C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 445 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 290
A+++++E++ + P+TI ++ P R + ++G I+AS STF+ IS ++
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 92.7 bits (220), Expect = 2e-19
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 17/139 (12%)
Frame = -3
Query: 631 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 455
+ +G ERF PE F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 454 PGIADRMQKEITALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLS 323
A ++Q+++ L+ P I +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 322 TFQQMWISKEEYDESGPGI 266
F Q+ +K EY E GP I
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.4 bits (177), Expect = 3e-14
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = -3
Query: 631 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 452
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 451 GIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 281
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 280 SGPGI 266
G +
Sbjct: 379 RGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.4 bits (177), Expect = 3e-14
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = -3
Query: 631 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 452
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 451 GIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 281
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 280 SGPGI 266
G +
Sbjct: 379 RGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -3
Query: 541 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 377
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 376 PERK----YSVWIGGSILASL-STFQQMWISKEEY 287
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 554 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGNHRPR 411
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 320 GGQGSQDGSTDPYGVLP 370
GG + +GSTDPY V+P
Sbjct: 8 GGGSTGNGSTDPYAVIP 24
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/79 (25%), Positives = 25/79 (31%)
Frame = -2
Query: 635 GDHHR*REVPLSRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHV 456
G+HH P G +G H HHE P H H +HH
Sbjct: 407 GEHHGTHHSPAHHGEHGTHHGHHG-EHHHAPAHHGHHESHGHGHHSPAH-HGHHGEHHHA 464
Query: 455 PRYRRQDAEGNHRPRALDH 399
P + E +H P H
Sbjct: 465 PAHHGHHGEHHHAPAHHGH 483
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,324,676
Number of Sequences: 27780
Number of extensions: 300269
Number of successful extensions: 874
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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