Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_P06
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1054 + 10847342-10847543,10847627-10847962,10848557-108488...    63   2e-10

>12_01_1054 +
           10847342-10847543,10847627-10847962,10848557-10848807,
           10849226-10849313,10849548-10849723,10850597-10850656,
           10850811-10850901,10851563-10851639,10852565-10852653,
           10852950-10853061,10853623-10853725,10854892-10855121
          Length = 604

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
 Frame = -3

Query: 683 YLILDPHYTGAEDITTVINKGWCGWKSS------DFWNKTAHYNLCLPQTRP 546
           +LILDPHYTGA+D+  ++N GWCGWK S       F+ K   YNL LPQ RP
Sbjct: 551 FLILDPHYTGADDLKKIVNGGWCGWKKSIDSKGRSFFLKDKFYNLLLPQ-RP 601


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,012,038
Number of Sequences: 37544
Number of extensions: 269627
Number of successful extensions: 479
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)