Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_P06
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457278-1|CAG33559.1|  469|Homo sapiens FLJ11200 protein.             89   1e-17
BC010493-1|AAH10493.1|  469|Homo sapiens chromosome 4 open readi...    89   1e-17
AK002062-1|BAA92064.1|  469|Homo sapiens protein ( Homo sapiens ...    89   1e-17
BC067904-1|AAH67904.1|  142|Homo sapiens inactive Ufm1-specific ...    37   0.079
AF312032-2|AAK21004.1|  142|Homo sapiens unknown protein.              37   0.079

>CR457278-1|CAG33559.1|  469|Homo sapiens FLJ11200 protein.
          Length = 469

 Score = 89.0 bits (211), Expect = 1e-17
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = -3

Query: 686 RYLILDPHYTGAEDITTVINKGWCGWKSSDFWNKTAHYNLCLPQTRP 546
           ++LILDPHYTGAED+  ++ KGWCGWK  DFWNK A+YNLCLPQ RP
Sbjct: 421 KFLILDPHYTGAEDLQVILEKGWCGWKGPDFWNKDAYYNLCLPQ-RP 466


>BC010493-1|AAH10493.1|  469|Homo sapiens chromosome 4 open reading
           frame 20 protein.
          Length = 469

 Score = 89.0 bits (211), Expect = 1e-17
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = -3

Query: 686 RYLILDPHYTGAEDITTVINKGWCGWKSSDFWNKTAHYNLCLPQTRP 546
           ++LILDPHYTGAED+  ++ KGWCGWK  DFWNK A+YNLCLPQ RP
Sbjct: 421 KFLILDPHYTGAEDLQVILEKGWCGWKGPDFWNKDAYYNLCLPQ-RP 466


>AK002062-1|BAA92064.1|  469|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11200 fis, clone PLACE1007725. ).
          Length = 469

 Score = 89.0 bits (211), Expect = 1e-17
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = -3

Query: 686 RYLILDPHYTGAEDITTVINKGWCGWKSSDFWNKTAHYNLCLPQTRP 546
           ++LILDPHYTGAED+  ++ KGWCGWK  DFWNK A+YNLCLPQ RP
Sbjct: 421 KFLILDPHYTGAEDLQVILEKGWCGWKGPDFWNKDAYYNLCLPQ-RP 466


>BC067904-1|AAH67904.1|  142|Homo sapiens inactive Ufm1-specific
           protease 1 protein.
          Length = 142

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -3

Query: 680 LILDPHYTGAEDITTVIN-KGWCGWKS-SDFWNKTAHYNLCL 561
           L+LDPHY G     + +   GW GW+  S  ++  + YNLCL
Sbjct: 88  LVLDPHYWGTPKSPSELQAAGWVGWQEVSAAFDPNSFYNLCL 129


>AF312032-2|AAK21004.1|  142|Homo sapiens unknown protein.
          Length = 142

 Score = 36.7 bits (81), Expect = 0.079
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -3

Query: 680 LILDPHYTGAEDITTVIN-KGWCGWKS-SDFWNKTAHYNLCL 561
           L+LDPHY G     + +   GW GW+  S  ++  + YNLCL
Sbjct: 88  LVLDPHYWGTPKSPSELQAAGWVGWQEVSAAFDPNSFYNLCL 129


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,376,403
Number of Sequences: 237096
Number of extensions: 1681839
Number of successful extensions: 2775
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2775
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)