Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_P06
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70854-2|AAO91721.1|  575|Caenorhabditis elegans Hypothetical pr...    76   2e-14
U70854-1|AAB09146.1|  589|Caenorhabditis elegans Hypothetical pr...    76   2e-14
Z81508-2|CAB04143.1|  323|Caenorhabditis elegans Hypothetical pr...    31   0.59 
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z92796-4|CAB63231.1|  516|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>U70854-2|AAO91721.1|  575|Caenorhabditis elegans Hypothetical
           protein F38A5.1b protein.
          Length = 575

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = -3

Query: 689 TRYLILDPHYTGAEDITTVINKGWCGWKSSDFWNKTAHYNLCLPQ 555
           T++L+LDPHYTG+EDI T+ +KGWC WK + FW+K   YN+ LPQ
Sbjct: 525 TKFLVLDPHYTGSEDIKTITSKGWCAWKPASFWSKDHFYNMVLPQ 569


>U70854-1|AAB09146.1|  589|Caenorhabditis elegans Hypothetical
           protein F38A5.1a protein.
          Length = 589

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = -3

Query: 689 TRYLILDPHYTGAEDITTVINKGWCGWKSSDFWNKTAHYNLCLPQ 555
           T++L+LDPHYTG+EDI T+ +KGWC WK + FW+K   YN+ LPQ
Sbjct: 539 TKFLVLDPHYTGSEDIKTITSKGWCAWKPASFWSKDHFYNMVLPQ 583


>Z81508-2|CAB04143.1|  323|Caenorhabditis elegans Hypothetical
           protein F20E11.4 protein.
          Length = 323

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 22/83 (26%), Positives = 39/83 (46%)
 Frame = -1

Query: 664 TILELKISQLLLIKDGAVGRVQIFGIKLLIIIFVCHKQGQLFEWSYSLCSVCNLFFFSIY 485
           TI  + I  + LI   +   V  FGIK     ++  + G+L   S ++ S+    F+S+ 
Sbjct: 190 TISFVGIGIMSLILSSSFSNVIYFGIKCYN--YISQQLGELSTQSQAIKSLQAQLFYSLI 247

Query: 484 CQFTLKC*AFNISLGYLSLIKMY 416
            QF + C    +  G + +I M+
Sbjct: 248 FQFAIPCLLMYLPAGTIFMITMF 270


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 638 TVINKGWCGWKSSDFWNKTAHYNLCL 561
           T  N G+C WK  +F   T  Y+ C+
Sbjct: 487 TWFNAGYCAWKLENFKESTQCYHRCV 512


>Z92796-4|CAB63231.1|  516|Caenorhabditis elegans Hypothetical
           protein H25K10.5 protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 320 YIKSSFEDNNLSVIVFENPKIILI*IYMQKNIHCSVTQET 201
           YIK     N  SV++++NP      I  + N HC + Q T
Sbjct: 443 YIKHIISKNEKSVVIYDNP------ILFENNEHCKMYQLT 476


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,590,192
Number of Sequences: 27780
Number of extensions: 298408
Number of successful extensions: 681
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)